Glycoside Hydrolase Family 138

Activities in FamilyRhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Mechanism Retaining a
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseGlu
Catalytic Proton DonorGlu
NoteCreated after Ndeh et al., Nature (2017) 544(7648):65-70 (PMID=28329766); mechanism and structure after Labourel et al., JBC (2019) (PMID=30877196)
External resourcesCAZypedia;
Statistics GenBank accession (274); Uniprot accession (4); PDB accession (4); 3D entries (1); cryst (0)
| 1 | 2 | 3 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 INP51_04680   Blautia liquoris LZLJ-3 QOV20929.1    
 PMF13cell1_01694   Blautia producta PMF1 QBE96156.1    
 A4V09_16610   Blautia pseudococcoides YL58 ANU77234.1    
 MKQ68_10630   Chitinophaga horti R8 UYQ95556.1    
 PIECOFPK_02018   Chitinophagaceae bacterium C216 WWC84285.1    
 NFI80_04410   Dyadobacter chenhuakuii CY22 USJ31979.1    
 MUK70_09705   Dyadobacter chenwenxiniae LJ419 UON85259.1    
 NFI81_08035   Dyadobacter fanqingshengii CY399 USJ37722.1    
 DCPSUM001_32340   Dysgonomonas capnocytophagoides SMU001 BES62990.1    
 G7050_15100   Dysgonomonas sp. HDW5A QIK61092.1    
 G7051_15530   Dysgonomonas sp. HDW5B QIK55684.1    
 FKX85_07955   Echinicola soli LN3S3 QDH78973.1    
 DN752_14265   Echinicola strongylocentroti MEBiC08714 AWW33192.1    
 Echvi_1667   Echinicola vietnamensis DSM 17526 AGA77932.1    
 GWR55_01250   Edaphobacter sp. 12200R-103 QHS50525.1    
 FLA_1192   Filimonas lacunae NBRC 104114 BAV05185.1    
 FSB75_07240   Flavisolibacter ginsenosidimutans Gsoil 636 QEC55694.1    
 GSB9_00843   Flavobacteriaceae bacterium GSB9 UKM64296.1
UKM64296.2
   
 RHP49_11235   Flavobacteriaceae bacterium HL-DH10 WNH11477.1    
 LLY39_17600   Flavobacterium anhuiense T4 URM36217.1    
 BIW12_07180   Flavobacterium commune PK15 AOZ99240.1    
 HYN56_20270   Flavobacterium crocinum HYN0056 AWK07527.1    
 J0383_21100   Flavobacterium endoglycinae BB8 QSW88723.1    
 HYN86_16740   Flavobacterium fluviale HYN0086 AXB59098.1    
 EM308_01345   Flavobacterium gilvum EM1308 AOW08264.1    
 V6624_19160   Flavobacterium ginsenosidimutans YTB16 WXK49142.1    
 M0M44_19335   Flavobacterium humidisoli MMS21-Er5 UPZ14902.1    
 NYQ10_17720   Flavobacterium johnsoniae G16 WJS93928.1    
 BB050_03353   Flavobacterium johnsoniae GSE09 AOC96442.1    
 Fjoh_4076   Flavobacterium johnsoniae UW101 ABQ07084.1    
 SR927_24085   Flavobacterium johnsoniae UW101 ATCC 17061 WQG81078.1    
 NLJ00_20195   Flavobacterium panici BSSL-CR3 UUF13580.1    
 Q1W71_14445   Flavobacterium pectinovorum ZE23VCel01 WKL46156.1    
 NLG42_18315   Flavobacterium plurextorum RSG-18 UUW08049.1    
 AABD74_17580   Flavobacterium soyae 55 WYZ18965.1    
 FLGSB24_34370   Flavobacterium sp. GSB-24 BDU26693.1    
 PQ462_13885   Flavobacterium sp. KACC 22758 WDF57807.1    
 PQ463_08735   Flavobacterium sp. KACC 22763 WDF66239.1    
 IHE43_05265   Flavobacterium sp. MDT1-60 QOG03641.1    
 P0R33_21575   Flavobacterium sp. YJ01 WET02346.1    
 FTO74_06235   Granulicella sp. WH15 QHN03013.1    
 MUN82_11525   Hymenobacter aerilatus 5413J-13 UOR03577.1    
 MUN80_15140   Hymenobacter cellulosivorans 5116S-27 UOQ51094.1    
 MTP16_13585   Hymenobacter monticola KACC 22596 UOE32161.1    
 MUN81_16125   Hymenobacter sp. 5317J-9 UOQ96762.1    
 GUY19_05435   Hymenobacter sp. BT182 QHJ06767.1    
 SD425_25475   Hymenobacter sp. GOD-10R WRQ28426.1    
 MTX78_05010   Hymenobacter tibetensis KACC 21982 UOG75960.1    
 MUN86_08890 (fragment)   Hymenobacter volaticus 5420S-77 UOQ67953.1    
 MUN86_08885 (fragment)   Hymenobacter volaticus 5420S-77 UOQ67952.1    
 CE91St56_50730   Lachnospiraceae bacterium CE91-St56 BDF47950.1    
 H4075_05565   Lacibacter sediminis S13-6-22 QNA45668.1    
 CJ739_944   Mariniflexile sp. TRM1-10 AXP80037.1    
 FOE78_15235   Microlunatus elymi KUDC0627 QDP97099.1    
 LLH06_18090   Mucilaginibacter daejeonensis KACC 14964 UEG52861.1    
 SNE26_15680   Mucilaginibacter gossypii cycad4 WPU97466.1    
 J3L18_29335   Mucilaginibacter gossypii P3 QTE37166.1
QTE37166.2
   
 DIU38_018080   Mucilaginibacter gossypii P4 QEM17882.1    
 HQ865_01575   Mucilaginibacter mali G2-14 QKJ28502.1    
 SAMN05216490_2658   Mucilaginibacter mallensis MP1X4 SDT17619.1    
 HH214_16060   Mucilaginibacter robiniae F39-2 QJD97275.1    
 DEO27_002130   Mucilaginibacter rubeus P1 QEM08867.1    
 DIU31_017900   Mucilaginibacter rubeus P2 QEM05291.1    
 J3L19_09600   Mucilaginibacter rubeus P2 QTE45586.1    
 J3L22_32595   Mucilaginibacter rubeus P2-0.1 QTE63266.1    
 J3L23_01255   Mucilaginibacter rubeus P2-0.5 QTE57271.1    
 J3L20_32225   Mucilaginibacter rubeus P2-22.5 QTF62024.1    
 J3L21_09580   Mucilaginibacter rubeus P2-4 QTE52183.1    
 SNE25_24005   Mucilaginibacter sabulilitoris SNA2 WPU92394.1    
 PQ469_09740   Mucilaginibacter sp. KACC 22773 WDF80288.1    
 MusilaSJ_10265   Mucilaginibacter sp. SJ WEA03318.1    
 MTO98_08665   Mucilaginibacter sp. SMC90 UOE51146.1    
 E7747_00445   Muribaculum sp. H5 QCD40911.1    
 A8C56_03975   Niabella ginsenosidivorans BS26 ANH80254.1    
 NIASO_19995   Niabella soli DSM 19437 AHF16839.1    
 KRR40_43470 (fragment)   Niabella sp. I65 ULT41440.1    
 U0035_03815   Niabella yanshanensis HAMBI_3031 WQD39277.1    
 Niako_3625   Niastella koreensis GR20-10 AEV99924.1    
 FKG96_08660   Olivibacter sp. LS-1 QEL00876.1    
 H8S90_12235   Olivibacter sp. SDN3 QNL52517.1    
 ASA1KI_37950   Opitutales bacterium ASA1 BET68877.1    
 MJA45_14830   Paenibacillus aurantius MBLB1776 WNQ08924.1    
 MJA45_15000   Paenibacillus aurantius MBLB1776 WNQ08957.1    
 SK3146_00986   Paenibacillus konkukensis SK3146 UQZ81830.1    
 PM3016_4161   Paenibacillus mucilaginosus 3016 AFC30939.1    
 B2K_21590   Paenibacillus mucilaginosus K02 AFH63260.1    
 ERY13_20925   Paenibacillus mucilaginosus KN-18 WFA19534.1    
 KNP414_04750   Paenibacillus mucilaginosus KNP414 AEI43280.1    
 KCX80_20465   Paenibacillus mucilaginosus PM12 WDM24863.1    
 N6H14_28325 (fragment)   Paenibacillus sp. CC-CFT747 WJH33858.1    
 N6H14_28060   Paenibacillus sp. CC-CFT747 WJH33814.1    
 N6H14_28320 (fragment)   Paenibacillus sp. CC-CFT747 WJH33857.1    
 DVH26_23520   Paenibacillus sp. H1-7 ULL17147.1    
 GYMC10_3010   Paenibacillus sp. Y412MC10 ACX65276.1    
 GYMC10_3036   Paenibacillus sp. Y412MC10 ACX65302.1    
 L0M14_11325   Paenibacillus sp. YPD9-1 UJF35622.1    
 FYC62_03660   Pedobacter aquae CJ43 QEK50867.1    
 IZT61_02930   Pedobacter endophyticus JBR3-12 QPH40250.1    
 Phep_2820   Pedobacter heparinus DSM 2366 ACU05019.1    
 LOK61_06335   Pedobacter mucosus Q8-18 UKT65397.1    
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