Carbohydrate-Binding Module Family 50

Known ActivitiesModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesInterPro; PFAM;
Statistics GenBank accession (3148); Uniprot accession (1452); PDB accession (2); 3D entries (3); cryst (1)
All (5085) Archaea (3) Bacteria (4849) Eukaryota (149) Viruses (80) unclassified (4) Structure (3 - 1 cryst) Characterized (2)
Eukaryota
Protein Name EC#OrganismGenBankUniprotPDB/3D
 chitin elicitor receptor kinase 1 (CERK1;AT1G51940)   Arabidopsis thaliana AAF99862.1
AEE32737.1
NP_175606.2
   
 Chi100   Aspergillus fumigatus YJ-407 AAS72549.1 Q6Q121  
 Chi100   Aspergillus fumigatus YJ-407 AAS72549.1 Q6Q121  
 AN0509.2   Aspergillus nidulans FGSC A4 EAA66608.1 C8VSW7  
 AN0509.2   Aspergillus nidulans FGSC A4 EAA66608.1 C8VSW7  
 An01g02730   Aspergillus niger CBS 513.88 CAK43640.1    
 An01g02730   Aspergillus niger CBS 513.88 CAK43640.1    
 AO090012000041   Aspergillus oryzae RIB40 BAE60282.1    
 AO090012000041   Aspergillus oryzae RIB40 BAE60282.1    
 AO090103000180   Aspergillus oryzae RIB40 BAE65642.1    
 chitin-binding protein (ORF3)   Babjeviella inositovora NRRL Y-18709 CAD91890.1 Q7Z8R6  
 chitin-binding protein (ORF3)   Babjeviella inositovora NRRL Y-18709 CAD91890.1 Q7Z8R6  
 chitin-binding protein (ORF3)   Babjeviella inositovora NRRL Y-18709 CAD91890.1 Q7Z8R6  
 carbohydrate-Binding Module family 50 protein (Bofut4_p132750.1)   Botryotinia fuckeliana CCD53721.1    
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 F07G11.9   Caenorhabditis elegans Bristol N2 AAG24054.1
CCD64335.1
CCD64335.2
NP_504862.1
O16237  
 T01C4.1   Caenorhabditis elegans Bristol N2 AAB09177.1
CCD83390.1
NP_504806.1
Q94298  
 T01C4.1   Caenorhabditis elegans Bristol N2 AAB09177.1
CCD83390.1
NP_504806.1
Q94298  
 T01C4.1   Caenorhabditis elegans Bristol N2 AAB09177.1
CCD83390.1
NP_504806.1
Q94298  
 T01C4.1   Caenorhabditis elegans Bristol N2 AAB09177.1
CCD83390.1
NP_504806.1
Q94298  
    Colletotrichum higginsianum IMI 349063      
 Orf2   Debaryomyces hansenii CBS 770 AET14259.1    
 Orf2   Debaryomyces hansenii CBS 770 AET14259.1    
 DEHA0F18073g   Debaryomyces hansenii CBS767 CAG89465.1    
 chitin binding protein   Debaryomyces robertsiae CBS6693 CAE84954.1 Q707V9  
 chitin binding protein   Debaryomyces robertsiae CBS6693 CAE84954.1 Q707V9  
 chitinase A (EaChiA)   Equisetum arvense BAI22848.1 C7G3I3  
 Lyk11   Glycine max ABQ59610.1 A5YJW0  
 predicted protein   Hordeum vulgare subsp. vulgare BAJ93426.1    
 predicted protein   Hordeum vulgare subsp. vulgare BAJ93426.1    
 chitinase / tRNase killer gammα-toxin (zymocin α-subunit)   Kluyveromyces lactis CAA25334.1
CAA25569.1
CAA30137.1
P09805.1  
 chitinase / tRNase killer gammα-toxin (zymocin α-subunit)   Kluyveromyces lactis CAA25334.1
CAA25569.1
CAA30137.1
P09805.1  
 ORF   Leptosphaeria maculans v23.1.3 CBX91502.1 E4ZJ71  
 ORF   Leptosphaeria maculans v23.1.3 CBX91502.1 E4ZJ71  
 ORF   Leptosphaeria maculans v23.1.3 CBX91502.1 E4ZJ71  
 ORF   Leptosphaeria maculans v23.1.3 CBX91502.1 E4ZJ71  
 ORF   Leptosphaeria maculans v23.1.3 CBX91502.1 E4ZJ71  
 LysM type receptor kinase (Lys5)   Lotus japonicus BAI79272.1 D3KTZ5  
 LysM type receptor kinase (Lys4)   Lotus japonicus BAI79271.1 D3KTZ4  
 LysM type receptor kinase (Lys4)   Lotus japonicus BAI79270.1 D3KTZ3  
 lectin (MGG_03307)   Magnaporthe grisea 70-15 EDK00177.1   2L9Y[A]
 chitin binding protein   Millerozyma acaciae NRRL Y-18665 CAE84958.1 Q707V5  
 chitin binding protein   Millerozyma acaciae NRRL Y-18665 CAE84958.1 Q707V5  
 MBP_91N22.26 (fragment)   Musa balbisiana ABF70118.1 Q1EP39  
 ORF   Mustela putorius furo AES01403.1    
 MYCTH_110674   Myceliophthora thermophila ATCC 42464 AEO54574.1    
 MYCTH_95226   Myceliophthora thermophila ATCC 42464 AEO58679.1    
 MYCTH_95226   Myceliophthora thermophila ATCC 42464 AEO58679.1    
 MYCTH_94536   Myceliophthora thermophila ATCC 42464 AEO59465.1    
 MYCTH_94536   Myceliophthora thermophila ATCC 42464 AEO59465.1    
 MYCTH_113450   Myceliophthora thermophila ATCC 42464 AEO54851.1    
 NCU07484.1   Neurospora crassa OR74A XP_327770.1    
 NCU07484.1   Neurospora crassa OR74A XP_327770.1    
 OsI_03683   Oryza sativa Indica Group EEC71457.1 B8A9D5  
 OsI_36433   Oryza sativa Indica Group EEC68331.1 B8BKZ5  
 OsI_36433   Oryza sativa Indica Group EEC68331.1 B8BKZ5  
 OsJ_03403   Oryza sativa Japonica Group EEE55360.1 B9EZL6  
 OsJ_34203   Oryza sativa Japonica Group EEE52255.1 B9GB49  
 OsJ_34203   Oryza sativa Japonica Group EEE52255.1 B9GB49  
 LOC_Os11g34570   Oryza sativa Japonica Group ABA94116.1 Q2R2V0  
 LOC_Os11g34570   Oryza sativa Japonica Group ABA94116.1 Q2R2V0  
 extracellular protein 6 (Ecp6)   Passalora fulva ACF19427.1 B3VBK9  
 extracellular protein 6 (Ecp6)   Passalora fulva ACF19427.1 B3VBK9  
 extracellular protein 6 (Ecp6)   Passalora fulva ACF19427.1 B3VBK9  
 Pc16g15030   Penicillium chrysogenum Wisconsin 54-1255 CAP94173.1 B6HA46  
 Pc16g15030   Penicillium chrysogenum Wisconsin 54-1255 CAP94173.1 B6HA46  
 Pc12g03430   Penicillium chrysogenum Wisconsin 54-1255 CAP79970.1 B6GWN8  
 Pc15g01070   Penicillium chrysogenum Wisconsin 54-1255 CAP82993.1 B6H6Q1  
 Pc16g06730   Penicillium chrysogenum Wisconsin 54-1255 CAP93343.1 B6H7P0  
 Pc16g06730   Penicillium chrysogenum Wisconsin 54-1255 CAP93343.1 B6H7P0  
 Pc16g06730   Penicillium chrysogenum Wisconsin 54-1255 CAP93343.1 B6H7P0  
 Pc16g07370   Penicillium chrysogenum Wisconsin 54-1255 CAP93407.1 B6H7K8  
 Pc22g01500   Penicillium chrysogenum Wisconsin 54-1255 CAP97438.1 B6HPK4  
 unknown   Picea sitchensis ABK22923.1 A9NQL2  
 Orf2   Pichia etchellsii CBS 2011 CAC34265.1 Q9C127  
 Orf2   Pichia etchellsii CBS 2011 CAC34265.1 Q9C127  
 PIIN_02169   Piriformospora indica CCA68305.1    
 PIIN_02169   Piriformospora indica CCA68305.1    
 PIIN_02169   Piriformospora indica CCA68305.1    
 PIIN_02169   Piriformospora indica CCA68305.1    
 PIIN_02172   Piriformospora indica CCA68308.1    
 PIIN_02172   Piriformospora indica CCA68308.1    
 PIIN_02172   Piriformospora indica CCA68308.1    
 PIIN_03654   Piriformospora indica CCA69713.1    
 PIIN_03654   Piriformospora indica CCA69713.1    
 PIIN_03654   Piriformospora indica CCA69713.1    
 PIIN_03654   Piriformospora indica CCA69713.1    
 PIIN_03654   Piriformospora indica CCA69713.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_03655   Piriformospora indica CCA69714.1    
 PIIN_04484   Piriformospora indica CCA70547.1    
 PIIN_06786   Piriformospora indica CCA72850.1    
 unnamed protein product   Podospora anserina S mat+ CAP59788.1 B2A9P0  
 unnamed protein product   Podospora anserina S mat+ CAP61951.1 B2AET5  
 unnamed protein product   Podospora anserina S mat+ CAP61951.1 B2AET5  
 unnamed protein product   Podospora anserina S mat+ CAP61951.1 B2AET5  
 unnamed protein product   Podospora anserina S mat+ CAP62000.1 B2AEY3  
 unnamed protein product   Podospora anserina S mat+ CAP65303.1 B2AMW2  
 unnamed protein product   Podospora anserina S mat+ CAP65303.1 B2AMW2  
 unnamed protein product   Podospora anserina S mat+ CAP65316.1 B2AMX5  
 unnamed protein product   Podospora anserina S mat+ CAP65316.1 B2AMX5  
 unnamed protein product   Podospora anserina S mat+ CAP65316.1 B2AMX5  
 unnamed protein product   Podospora anserina S mat+ CAP65316.1 B2AMX5  
 unnamed protein product   Podospora anserina S mat+ CAP66963.1 B2AQ24  
 unnamed protein product   Podospora anserina S mat+ CAP66963.1 B2AQ24  
 unnamed protein product   Podospora anserina S mat+ CAP66963.1 B2AQ24  
 unnamed protein product   Podospora anserina S mat+ CAP67126.1 B2ARV6  
 unnamed protein product   Podospora anserina S mat+ CAP67126.1 B2ARV6  
 unnamed protein product   Podospora anserina S mat+ CAP68130.1 B2AUQ7  
 unnamed protein product   Podospora anserina S mat+ CAP73555.1 B2B6X7  
 unnamed protein product   Podospora anserina S mat+ CAP70232.1 B2AZB8  
 chitinase A (ChiA;PrChiA)   Pteris ryukyuensis BAE98134.1 Q0WYK2  
 chitinase A (ChiA;PrChiA)   Pteris ryukyuensis BAE98134.1 Q0WYK2  
 Lyk3 (fragment)   Solanum lycopersicum AEO18232.1    
 THITE_154425   Thielavia terrestris NRRL 8126 AEO62937.1    
 THITE_154425   Thielavia terrestris NRRL 8126 AEO62937.1    
 THITE_2128646   Thielavia terrestris NRRL 8126 AEO66607.1    
 THITE_2128646   Thielavia terrestris NRRL 8126 AEO66607.1    
 THITE_2057765   Thielavia terrestris NRRL 8126 AEO69851.1    
 THITE_2057765   Thielavia terrestris NRRL 8126 AEO69851.1    
 THITE_46100   Thielavia terrestris NRRL 8126 AEO70565.1    
 THITE_46100   Thielavia terrestris NRRL 8126 AEO70565.1    
 THITE_2111816   Thielavia terrestris NRRL 8126 AEO65134.1    
 THITE_2087754   Thielavia terrestris NRRL 8126 AEO66281.1    
 chitinase (Chit101)   Trichoderma atroviride IMI 352941 (T11) CAI30794.1 A0ZW00  
 chitinase (Chit101)   Trichoderma atroviride IMI 352941 (T11) CAI30794.1 A0ZW00  
 chitinase 18-10 (Tac3;Chi18-10)   Trichoderma atroviride P1 AAZ23945.1 Q2Y0W0  
 chitinase 18-10 (Tac3;Chi18-10)   Trichoderma atroviride P1 AAZ23945.1 Q2Y0W0  
 VIT_00016975001 (fragment)   Vitis vinifera CBI36053.3 D7U0A7  
 VIT_00023162001 (fragment)   Vitis vinifera CBI29651.3 D7TGM9  
 VIT_00019038001   Vitis vinifera CBI17583.3 D7SPK4  
 VIT_00019038001   Vitis vinifera CBI17583.3 D7SPK4  
 chitinase/lysozyme   Volvox carteri f. nagariensis AAC13727.1 O65213  
 chitinase/lysozyme   Volvox carteri f. nagariensis AAC13727.1 O65213  




Last update: 2012-01-31 © Copyright 1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II