Carbohydrate-Binding Module Family "Non Classified"

Activities in FamilyCarbohydrate-binding modules not yet assigned to a family.
Statistics GenBank accession (500); Uniprot accession (93); PDB accession (48); 3D entries (9); cryst (0)
Bacteria
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 β-lactam-insensitive peptidoglycan transpeptidase (Ldt;HMPREF0351_12555)   Enterococcus faecium DO AFK60179.1  
1ZAT[A] 2.40
2HKL[A,B,C] 2.60
 xylanase C (XynC;PbXyn10C) (Xyn10C) 3.2.1.8 Prevotella bryantii B14 CAB01855.1 P72234
4MGQ[A] 1.68
 β-L-arabinopyranosidase (AgaA2;SaArap27A;SAV_2186) (Arap27A) 3.2.1.88 Streptomyces avermitilis MA-4680 = NBRC 14893 BAC69897.1
NP_823362.1
 
3A21[A,B] 1.51
3A22[A,B] α-L-Arap
1.90
3A23[A,B] β-D-Galp
1.90
 sialidase / neuraminidase (NanH;VcNA;VCSA) 3.2.1.18 Vibrio cholerae 569B 395 AAA27546.1 P37060
1KIT[A] 2.30
1W0O[A] α-D-Neup5Ac
<carb_like_DAN>
1.9
1W0P[A] α-D-Neup5Ac
1.6
6EKS[A] <carb_like_G39>
1.87
6EKU[A] <carb_like_ZMR>
1.75
Eukaryota
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 peptidoglycan recognition protein (Pgrp3)   Branchiostoma belcheri tsingtauense ALI16132.1  
4Z8I[A] 2.70
4ZXM[A] 2.80
 peptidoglycan recognition protein (PGRP)   Camelus dromedarius CAC19553.1
CAC84130.1
Q9GK12
2R2K[A,B,C,D] β-D-GlcpNAc-(1-4)-β-D-GlcpNAc
3.25
2R90[A,B,C,D] 2.80
2Z9N[A,B,C,D] 3.20
3C2X[A,B,C,D] 1.83
3CG9[A,B,C,D] α-L-Rhap
2.90
3COR[A,B,C,D] β-D-GalpNAc
3.10
3CXA[A,B,C,D] α-D-Glcp-(1-1)-α-D-Glcp
3.40
3NG4[A,B,C,D] α-D-Glcp-(1-4)-α-D-Glcp
β-D-GlcpNAc
1.73
3NKW[A,B,C,D] β-D-GlcpNAc
2.60
3NNO[A,B,C,D] α-L-Rhap
2.90
3NW3[A,B,C,D] <non_carb>-(1-3)-α-D-GlcpNAc
2.50
3O4K[A,B,C,D] β-D-FucpNAc4N-(1-3)-α-D-Glcp-(1-1)-<non_carb>
2.11
3OGX[A,B,C,D] β-D-4-deoxy-GlcpA2SO3-(1-4)-α-D-GlcpNSO36SO3
2.80
3OLK[A,B,C,D] <non_carb>-(1-3)-β-D-GlcpNAc
2.60
3QJ1[A,B,C,D] 3.20
3QS0[A,B,C,D] β-D-GlcpNAc
2.50
3QV4[A,B,C,D] β-D-GlcpNAc-(1-4)-β-D-GlcpNAc-(1-4)-β-D-GlcpNAc
2.70
3RT4[A,B,C,D] <non_carb>-(1-3)[<non_carb>-(1-2)]-α-D-GlcpN
1.70
3T2V[A,B,C,D] 2.51
3T3B[A,B,C,D] 3.20
3TRU[A,B,C,D] 3.20
3UIL[A,B,C,D] 2.20
3UML[A,B,C,D] 2.15
3UMQ[A,B,C,D] 2.20
3USX[A,B,C,D] 2.28
4EBS[A,B,C,D] <non_carb>-(1-3)-β-D-GlcpNAc
2.60
4EBT[A,B,C,D] β-D-GlcpNAc
2.60
4FNN[A,B,C,D] 2.24
4GF9[A,B,C,D] <non_carb>-(1-3)[<non_carb>-(1-2)]-α-D-GlcpN
2.80
4OPP[A,B,C,D] β-D-GlcpNAc
2.30
 lectin (CNL)   Clitocybe nebularis ACD47153.1
ACK56062.1
 
3NBC[A,B] β-D-Galp-(1-4)-β-D-Glcp
1.01
3NBD[A,B] β-D-Galp-(1-4)-α-D-Glcp
1.15
3NBE[A,B] β-D-GalpNAc-(1-4)-β-D-GlcpNAc-(1-1)-<non_carb>
1.86
 scarabaecin (Scar)   Oryctes rhinoceros BAC54897.1 Q86SC0
1IYC[A] NMR
 tachystatin A2   Tachypleus tridentatus BAA85250.1 Q9U8X3
1CIX[A] NMR
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