Polysaccharide Lyase Family 4

Known Activities	rhamnogalacturonan lyase (EC 4.2.2.-).
3D Structure Status	b-sandwitch + b-sheet
Statistics	GenBank accession (143); Uniprot accession (49); PDB accession (4); 3D entries (1); cryst (0)

Summary

All (93) Bacteria (35) Eukaryota (58) Structure (1 ) Characterized (5) Subfamilies (65)

Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D	Subf
SAV2108		Streptomyces avermitilis MA-4680	BAC69819.1 NP_823284.1			1
SCAB_19551		Streptomyces scabiei 87.22	CBG69076.1	C9YT62		1
SCAB_88501		Streptomyces scabiei 87.22	CBG75786.1	C9Z6B6		1
XALc_0866		Xanthomonas albilineans GPE PC73	CBA15384.1			1
XAC3505 (RhgB)		Xanthomonas axonopodis pv. citri str. 306	AAM38348.1 NP_643812.1			1
XACM_3402		Xanthomonas axonopodis pv. citrumelo F1	AEO43649.1			1
XCC3377 (fragment)		Xanthomonas campestris pv. campestris str. ATCC 33913	AAM42647.1			1
XCR_3715		Xanthomonas campestris pv. raphani 756C	AEL08575.1			1
XCV3632		Xanthomonas campestris pv. vesicatoria str. 85-10	CAJ25363.1	Q3BPF0		1
XOO1078 (RhgB)		Xanthomonas oryzae pv. oryzae KACC10331	AAW74332.1			1
XOO0978		Xanthomonas oryzae pv. oryzae MAFF 311018	BAE67733.1	Q2P6U4		1
PXO_02430		Xanthomonas oryzae pv. oryzae PXO99A	ACD60718.1	B2SLR9		1
XOC_3774		Xanthomonas oryzae pv. oryzicola BLS256	AEQ97864.1			1
rhamnogalacturonate lyase (RhiE;Dda3937_01465)	4.2.2.-	Dickeya dadantii 3937	ADM97186.1 CAD27359.1	Q8RJP2		4
Dd1591_3231		Dickeya zeae Ech1591	ACT08051.1	C6CHU4		4
ECA0804 (RhiE)		Pectobacterium atrosepticum SCRI1043	CAG73718.1			4
PC1_0682		Pectobacterium carotovorum subsp. carotovorum PC1	ACT11737.1	C6D929		4
Pecwa_0910		Pectobacterium wasabiae WPP163	ACX86728.1	D0KIA6		4
Eukaryota
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D	Subf
rhamnogalacturonan lyase (RhgB)	4.2.2.-	Aspergillus aculeatus KSM 510	AAA64368.1	Q00019	1NKG[A] 2XHN[A,B] 3NJV[A] 3NJX[A]	1
rhamnogalacturonan lyase (AN7135.2)	4.2.2.-	Aspergillus nidulans FGSC A4	ABF50880.1 EAA61387.1			1
AN3950.2		Aspergillus nidulans FGSC A4	EAA59259.1	C8V625		1
rhamnogalacturonan lyase A (RglA) (fragment)		Aspergillus niger CBS 120.49 / N400	CAD36194.1	Q8NJK5		1
An14g01130		Aspergillus niger CBS 513.88	CAK46452.1	A2R2L1		1
AO090011000349		Aspergillus oryzae RIB40	BAE64864.1			1
rhamnogalacturonan lyase (AsrglA)		Aspergillus sojae KBN1340	BAM14847.1			1
RGB		Marssonina brunnea f. sp. 'multigermtubi' S1	ADB23409.1	D2Y0Z8		1
MYCTH_51766		Myceliophthora thermophila ATCC 42464	AEO59196.1			1
NCU05598.1 (Asd-1)		Neurospora crassa OR74A	AAB39649.1 XP_325453.1	P78710 P78710.1		1
Pc14g00370		Penicillium chrysogenum Wisconsin 54-1255	CAP74178.1	B6H5K7		1
Pc21g12480		Penicillium chrysogenum Wisconsin 54-1255	CAP96145.1	B6HLN6		1
PIIN_01980		Piriformospora indica	CCA68112.1			1
PIIN_08850		Piriformospora indica	CCA74880.1			1
unnamed protein product		Podospora anserina S mat+	CAP61756.1	B2AE90		1
At4g38030		Arabidopsis thaliana	AEE86865.1 BAD94618.1 CAB37543.1 CAB80468.1 NP_195516.1	Q9SZK3		2
rhamnogalacturonan lyase (Myst6;AtMYST6;At2g22620)	4.2.2.-	Arabidopsis thaliana	AAD15570.1 AAS99719.1 AEC07329.1 AEC07330.1 BAD43911.1 NP_179847.1	Q9ZQ51		2
At4g24430		Arabidopsis thaliana	AAL15345.1 AAU90065.1 AAX12869.1 AEE84903.1 CAB45078.1 CAB79353.1 NP_567703.4	Q93Z90 Q9STV1		2
At1g09880		Arabidopsis thaliana	AAB60741.1 AEE28510.1 NP_172459.1	O04510		2
At1g09910 (Myst4)		Arabidopsis thaliana	AAB60743.1 AEE28513.1 BAC43029.1 NP_172462.1	O04512 Q8GX61		2
At4g37950		Arabidopsis thaliana	AAO42144.1 AEE86857.1 BAF00407.1 CAA76417.1 CAB37535.1 CAB80460.1 NP_195508.2	O65620 Q84W85 Q9SZJ7		2
At1g09890 (probable fragment)		Arabidopsis thaliana	AAB60742.1 AEE28511.1 NP_172460.1 NP_172460.6	O04511		2
predicted protein		Hordeum vulgare subsp. vulgare	BAK04420.1			2
MtrDRAFT_AC174360g24v2		Medicago truncatula	ABP03820.1			2
ORF		Medicago truncatula	ABY48149.1	A9YWS8		2
ORF		Oryza glaberrima	CBX24382.1			2
Os08g0554100		Oryza sativa Japonica Group	BAD09141.1 BAD10227.1 BAD33010.1 BAF24378.1	Q6Z3F5		2
Os08g0554300		Oryza sativa Japonica Group	BAD10230.1 BAD33013.1 BAD73821.1 BAF24379.1	Q0J3T6		2
Os11g0134100		Oryza sativa Japonica Group	BAF27519.1	Q0IUU6		2
Os12g0131900		Oryza sativa Japonica Group	BAF29096.1	Q0IQB9		2
Xucw87		Triticum dicoccoides	ABI15897.1	A0SPK1		2
unknown		Zea mays	ACG47352.1 ACR36487.1	B6UDB9		2
AN4139.2		Aspergillus nidulans FGSC A4	EAA59400.1			3
rhamnogalacturonan lyase (AN6395.2)	4.2.2.-	Aspergillus nidulans FGSC A4	ABF50877.1 EAA58417.1			3
An11g00390		Aspergillus niger CBS 513.88	CAK48272.1	A5ABH4		3
AO090012000147 + AO090012000148 (fragments)		Aspergillus oryzae RIB40	BAE60367.1 BAE60368.1			3
AO090113000057		Aspergillus oryzae RIB40	BAE63118.1			3
CGB_F0560W		Cryptococcus bacillisporus WM276	ADV22792.1			3
CNF04250		Cryptococcus neoformans var. neoformans JEC21	AAW44398.1			3
ORF		Leptosphaeria maculans v23.1.3	CBX93397.1	E4ZP28		3
ORF		Leptosphaeria maculans v23.1.3	CBY00247.1	E5A9A6		3
MG06041.4		Magnaporthe grisea 70-15	XP_369423.1			3
Pc21g23780		Penicillium chrysogenum Wisconsin 54-1255	CAP97275.1	B6HJ66		3
THITE_34523		Thielavia terrestris NRRL 8126	AEO64931.1			3
AO090138000119		Aspergillus oryzae RIB40	BAE64494.1			4
ORF		Leptosphaeria maculans v23.1.3	CBY02118.1	E5ACB6		4
THITE_2045470		Thielavia terrestris NRRL 8126	AEO65538.1			4