Polysaccharide Lyase Family 4

Activities in Familyrhamnogalacturonan endolyase (EC 4.2.2.23).
3D Structure Statusβ-sandwitch + β-sheet
External resourcesCAZypedia;
Statistics GenBank accession (317); Uniprot accession (57); PDB accession (4); 3D entries (1); cryst (0)
| 1 | 2 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 SAMN04489716_6253   Actinoplanes derwentensis DSM 43941 SDT71786.1     1
 AMIS_4890   Actinoplanes missouriensis 431 BAL85709.1     1
 ACPL_4823   Actinoplanes sp. SE50/110 AEV85714.1
SLM01517.1
    1
 Astex_1943   Asticcacaulis excentricus CB 48 ADU13606.1 C5SG82  
 LH89_07780   Cedecea neteri ND14b AIR69111.1     4
 CCALI_02567   Chthonomonas calidirosea T49 CCW36361.1    
 A7L45_03160   Clostridium estertheticum subsp. estertheticum DSM 8809 APC39134.1     4
 CSACC_15000   Clostridium saccharobutylicum BAS/B3/SW/136 AQR99691.1     1
 CLSA_c15040   Clostridium saccharobutylicum DSM 13864 AGX42504.1     1
 CLOSACC_15000   Clostridium saccharobutylicum NCP 195 AQS13677.1     1
 CLOSC_14920   Clostridium saccharobutylicum NCP 200 AQR89789.1     1
 CLOBY_15480   Clostridium saccharobutylicum NCP 258 AQS09421.1     1
 CYFUS_004258   Cystobacter fuscus DSM 52655 ATB38823.1     1
 Dd1591_2152   Dickeya chrysanthemi Ech1591 ACT06995.1 C6CIE9   4
 Dd1591_3231   Dickeya chrysanthemi Ech1591 ACT08051.1 C6CHU4   4
 rhamnogalacturonate lyase (RhiE;Dda3937_01465) 4.2.2.23 Dickeya dadantii 3937 CAD27359.1
ADM97186.1
Q8RJP2   4
 A4U42_13490   Dickeya solani IPO 2222 ANE76256.1     4
 W909_09610   Dickeya zeae EC1 AJC66304.1     4
 Dd586_2097   Dickeya zeae Ech586 ACZ76952.1 D2C043   4
 FLA_4895   Filimonas lacunae NBRC 104114 BAV08848.1    
 AWC35_21185   Gibbsiella quercinecans FRB97 ATA22571.1     4
 AciX8_2295   Granulicella mallensis MP5ACTX8 AEU36613.1    
 AciX9_4073   Granulicella tundricola MP5ACTX9 ADW70856.1    
 YC6258_00528   Gynuella sunshinyii YC6258 AJQ92578.1     1
 CEW81_13855   Kluyvera georgiana YDC799 ASG63525.1     4
 CEW82_08615   Lactobacillus pentosus SLC13 ASG79903.1     4
 CEW82_08625   Lactobacillus pentosus SLC13 ASG79905.1     4
 LACWKB8_0032   Lactobacillus sp. wkB8 AIS08354.1     4
 MPTP_0357   Melissococcus plutonius ATCC 35311 BAK20841.1     4
 MPTP_1756+MPTP_1755 (fragment)   Melissococcus plutonius ATCC 35311 BAK22178.1
BAK22179.1
   
 MPD5_1537   Melissococcus plutonius DAT561 BAL62737.1     4
 MPD5_0310   Melissococcus plutonius DAT561 BAL61591.1     4
 MEPL_c003240 (RhiE)   Melissococcus plutonius S1 AIM25537.1     4
 OPIT5_20755 (fragment)   Opitutaceae bacterium TAV5 AHF92317.1    
 Oter_2208   Opitutus terrae PB90-1 ACB75491.1 B1ZPN8   1
 PM3016_4405   Paenibacillus mucilaginosus 3016 AFC31171.1    
 B2K_22810   Paenibacillus mucilaginosus K02 AFH63492.1    
 KNP414_05005   Paenibacillus mucilaginosus KNP414 AEI43530.1    
 R70723_09200   Paenibacillus sp. FSL R7-0273 AIQ46041.1     1
 BS614_02440   Paenibacillus xylanexedens PAMC 22703 APO43036.1     1
 GZ59_07120 (RhiE)   Pectobacterium atrosepticum 21A AIK12584.1     4
 EV46_03550   Pectobacterium atrosepticum JG10-08 AIA69679.1     4
 ECA0804 (RhiE)   Pectobacterium atrosepticum SCRI1043 CAG73718.1     4
 BJJ97_08865   Pectobacterium carotovorum Polaris ASY76018.1     4
 SCC1_3636 (RhiE)   Pectobacterium carotovorum SCC1 ASN87038.1     4
 BJK05_20465   Pectobacterium carotovorum SK-992-20-13 ASY82222.1     4
 NC16_03415   Pectobacterium carotovorum subsp. brasiliense BC1 APS28829.1     4
 B5S52_18125   Pectobacterium carotovorum subsp. brasiliense SX309 ARA77692.1     4
 PC1_0682   Pectobacterium carotovorum subsp. carotovorum PC1 ACT11737.1 C6D929   4
 PCC21_007150   Pectobacterium carotovorum subsp. carotovorum PCC21 AFR02118.1     4
 A8F97_14375   Pectobacterium parmentieri RNS08.42.1A AOR60073.1     4
 Pecwa_0910   Pectobacterium parmentieri WPP163 ACX86728.1 D0KIA6   4
 W5S_0801   Pectobacterium sp. SCC3193 AFI88919.1     4
 A7983_11980   Pectobacterium wasabiae CFBP 3304 AOR63961.1     4
 SAMN04489743_0413   Pseudarthrobacter equi IMMIB L-1606 SDS59671.1    
 SAMN05216598_3802   Pseudomonas asplenii ATCC 23835 SDT05945.1     1
 SAMN04490182_1354   Pseudomonas cedrina BS2981 SDS35769.1     1
 PFLU2268   Pseudomonas fluorescens SBW25 CAY48503.1 C3KAQ7   1
 SAMN05216581_4701   Pseudomonas fuscovaginae LMG 2158 SEI22072.1     1
 SAMN04490197_0173   Pseudomonas orientalis BS2775 SDT87130.1     1
 SAMN04490208_0996   Pseudomonas poae BS2776 SDN65045.1     1
 H045_06510   Pseudomonas poae RE*1-1-14 AGE25374.1     1
 SAMN04490205_3485   Pseudomonas trivialis BS3111 SDS74203.1     1
 CFBP1590__2740   Pseudomonas viridiflava CFBP 1590 SMS10326.1     1
 VZ52_17720   Ralstonia mannitolilytica SN83A39 ANA36184.1     1
 CO705_21705   Ralstonia pickettii FDAARGOS_410 ATG22491.1     1
 Ser39006_1351   Serratia sp. ATCC 39006 AGU86566.1     4
 SAV2108   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC69819.1
NP_823284.1
    1
 BN159_2199   Streptomyces davawensis JCM 4913 CCK26578.1     1
 SLINC_6642   Streptomyces lincolnensis NRRL 2936 ANS68866.1     1
 TUE45_06769   Streptomyces reticuli CUW32020.1     1
 SCAB_19551   Streptomyces scabiei 87.22 CBG69076.1 C9YT62   1
 SCAB_88501   Streptomyces scabiei 87.22 CBG75786.1 C9Z6B6   1
 SAMN05444521_2052   Streptomyces sp. 3124.6 SHH81678.1     1
 SAMN05444521_6886   Streptomyces sp. 3124.6 SHI28354.1     1
 AS200_11660   Streptomyces sp. CdTB01 ALV32633.1     1
 QR97_23090   Streptomyces sp. PBH53 AKN72279.1     1
 A4E84_31585   Streptomyces sp. S10(2016) AMW13655.1     1
 BN2537_3191   Streptomyces venezuelae ATCC 15439 CUM37113.1     1
 AQF52_6701   Streptomyces venezuelae ATCC 15439 ALO12294.1     1
 ORF (fragment)   uncultured bacterium AIA18329.1    
 IMCC26134_00060 (fragment)   Verrucomicrobia bacterium IMCC26134 AKC81568.1    
 IMCC26134_04435   Verrucomicrobia bacterium IMCC26134 AKC82215.1    
 SAMN05444156_3018   Verrucomicrobiaceae bacterium GAS474 SDU27794.1    
 BSQ33_14325   Vibrio gazogenes ATCC 43942 ASA57226.1    
 XALc_0866   Xanthomonas albilineans GPE PC73 CBA15384.1     1
 XAC3505 (RhgB)   Xanthomonas axonopodis pv. citri str. 306 AAM38348.1
NP_643812.1
Q8PGV7   1
 XACM_3402   Xanthomonas axonopodis pv. citrumelo F1 AEO43649.1     1
 XAC29_17850   Xanthomonas axonopodis Xac29-1 AGH78979.1     1
 XB05_12320   Xanthomonas campestris 17 AKC81386.1     1
 XCC3377 (fragment)   Xanthomonas campestris pv. campestris str. ATCC 33913 AAM42647.1     1
 XCC3378 (fragment)   Xanthomonas campestris pv. campestris str. ATCC 33913 AAM42648.1    
 XCR_3715   Xanthomonas campestris pv. raphani 756C AEL08575.1     1
 XCV3632   Xanthomonas campestris pv. vesicatoria str. 85-10 CAJ25363.1 Q3BPF0   1
 AB890_17665   Xanthomonas citri pv. citri jx-6 AKM27429.1     1
 A9D66_18710   Xanthomonas citri pv. glycines str. 12-2 ARV24575.1     1
 BHE84_06125   Xanthomonas citri pv. glycines str. 8ra AOY64800.1     1
 XcvCFBP7111P_05440   Xanthomonas citri pv. vignicola CFBP7111 ASK91015.1     1
 XcvCFBP7112P_17745   Xanthomonas citri pv. vignicola CFBP7112 ASK97823.1     1
 XcvCFBP7113P_17955   Xanthomonas citri pv. vignicola CFBP7113 ASL01978.1     1
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