Polysaccharide Lyase Family 22

Activities in FamilyOligogalacturonate lyase / oligogalacturonide lyase (EC 4.2.2.6);
Exo-polygalacturonate lyase (EC 4.2.2.9);
Mechanism b-elimination
3D Structure Status7-bladed β-propeller
NoteStructure:function relationships and mechanistic investigation by Abbott et al. (2010) PMID - 20851883
External resourcesCAZypedia;
Statistics GenBank accession (2583); Uniprot accession (2); PDB accession (2); 3D entries (2); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 K3M67_16705   Sphingobium sp. V4 WIW90708.1     2
 N6H05_11765   Sphingobium sp. WTD-1 WIA58430.1     2
 N6H05_24785   Sphingobium sp. WTD-1 WIA56191.1     2
 YGS_C1P0072   Sphingobium sp. YG1 BBC98816.1     2
 H3V42_22140   Sphingobium yanoikuyae A3 QNG44537.1     2
 H3V42_05725   Sphingobium yanoikuyae A3 QNG47125.1     2
 PAE53_12835   Sphingobium yanoikuyae CC4533 WBQ14819.1     2
 PAE53_22255   Sphingobium yanoikuyae CC4533 WBQ18905.1     2
 U0025_14015   Sphingobium yanoikuyae HAMBI_1842 WQE05432.1     2
 U0025_23850   Sphingobium yanoikuyae HAMBI_1842 WQE07263.1     2
 A6768_25540   Sphingobium yanoikuyae S72 ATI83536.1     2
 A6768_15350   Sphingobium yanoikuyae S72 ATI81228.1     2
 BV87_24685   Sphingobium yanoikuyae SHJ ATP21714.1     2
 BV87_21415   Sphingobium yanoikuyae SHJ ATP20681.1     2
 EBF16_15120   Sphingobium yanoikuyae SJTF8 AYO78092.1     2
 EBF16_25250   Sphingobium yanoikuyae SJTF8 AYO80787.1     2
 GS397_25845   Sphingobium yanoikuyae YC-JY1 QHD70109.1     2
 GS397_14265   Sphingobium yanoikuyae YC-JY1 QHD68093.1     2
 HH800_03065   Sphingobium yanoikuyae YC-XJ2 QJR01269.1     2
 HH800_25050   Sphingobium yanoikuyae YC-XJ2 QJR05161.1     2
 NF699_09975   Sphingomonadaceae bacterium OTU29LAMAA1 USU03420.1     2
 NF699_05990   Sphingomonadaceae bacterium OTU29LAMAA1 USU06220.1     2
 NF699_09310   Sphingomonadaceae bacterium OTU29LAMAA1 USU06836.1     2
 NF700_05320   Sphingomonadaceae bacterium OTU29MARTA1 USU09702.1     2
 NF700_08090   Sphingomonadaceae bacterium OTU29MARTA1 USU10204.1     2
 NF700_08450   Sphingomonadaceae bacterium OTU29MARTA1 USU10270.1     2
 NF701_07460   Sphingomonadaceae bacterium OTU29THOMA1 USU13651.1     2
 NF701_04620   Sphingomonadaceae bacterium OTU29THOMA1 USU13134.1     2
 NF701_07820   Sphingomonadaceae bacterium OTU29THOMA1 USU13717.1     2
 SBA_ch1_15060   Sphingomonas bisphenolicum AO1 BBF69306.1     2
 LZK98_12885   Sphingomonas cannabina DM2-R-LB4 UIJ47411.1     2
 AWL63_14790   Sphingomonas panacis DCY99 AOH85032.1     2
 CVN68_10845   Sphingomonas psychrotolerans Cra20 ATY32409.1     2
 KV697_00795   Sphingomonas sanguinis NP2-R2 QXT35974.1     2
 NX02_05700   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE52876.1     2
 NX02_22685   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE56155.1     2
 PIB19_11175   Sphingomonas sp. 7/4-4 WBY06211.1     2
 E2E30_13645   Sphingomonas sp. AAP5 QBM76689.1     2
 HL653_16220   Sphingomonas sp. AP4-R1 QJU60735.1     2
 HL653_21735   Sphingomonas sp. AP4-R1 QJU60009.1    
 HL653_08170   Sphingomonas sp. AP4-R1 QJU60537.1     2
 BXU08_17925   Sphingomonas sp. LM7 AQR76003.1     2
 E5673_16845   Sphingomonas sp. PAMC26645 QCB43693.1     2
 OIM94_18415   Sphingomonas sp. R1 UYY79446.1     2
 OKW87_09045   Sphingomonas sp. S6-11 UZK64688.1     2
 ETR14_13800   Sphingosinicella sp. BN140058 QAY77460.1     2
 ETR14_06975   Sphingosinicella sp. BN140058 QAY76299.1     2
 G8759_13290   Spirosoma aureum BT328 QIP17794.1     2
 GJR95_08355   Spirosoma endbachense I-24 QHW01232.1     2
 K6K13_10875   Symbiopectobacterium purcellii SyEd1 QZN97756.1     1
 K6K13_20430   Symbiopectobacterium purcellii SyEd1 QZN95508.1     1
 FTW19_24535   Terriglobus albidus ORNL QEE30888.1     2
 AciPR4_1717   Terriglobus saanensis SP1PR4 ADV82524.1     2
 IMW88_00010   Thermoflavifilum sp. isolate Bu77 QOR76012.1     2
 RCV51_10800   Truepera radiovictrix CIP 108686 WMT56489.1    
 HZI73_20970   Vallitalea pronyensis FatNI3 QUI24626.1    
 IMCC26134_04400   Verrucomicrobia bacterium IMCC26134 AKC82209.1    
 IMCC26134_04310   Verrucomicrobia bacterium IMCC26134 AKC83907.1     2
 CMV30_18510   Verrucomicrobiota bacterium HZ-65 ATC65779.1    
 SAMN05444156_2998   Verrucomicrobium sp. GAS474 SDU27445.1    
 PYE67_17905   Vibrio aestuarianus U17 WGK86822.1     1
 LN249_23745   Vibrio alginolyticus LHF01 UFN71834.1     1
 VA208B3_34060   Vibrio alginolyticus VA20-8B-3 BDP37035.1     1
 VEA_000912   Vibrio antiquarius EX25 ACY53598.1     1
 VCSRO96_2830 (OgL)   Vibrio cholerae RIMD 2214334 BCK33010.1     1
 FR741_16345   Vibrio diabolicus FA3 QIR99357.1     1
 INT50_15930   Vibrio diabolicus R-31 QOV32317.1     1
 PUN47_22820   Vibrio fluvialis 10M-VF WDY54675.1     1
 KC397_22245   Vibrio fluvialis 19-VB00936 QUF71021.1     1
 AL475_17650   Vibrio fluvialis AK 1296-A2-1 AVH33728.1     1
 AL536_00970   Vibrio fluvialis ATCC 33809 AMF92089.1     1
 JTI62_19870   Vibrio fluvialis Colony36 QTH06789.1     1
 JTI97_19750   Vibrio fluvialis Colony42 QTG93971.1     1
 JTJ03_20095   Vibrio fluvialis Colony79 QTH10809.1     1
 KKIDH5335_36820   Vibrio fluvialis IDH05335 BEI25350.1     1
 NI390_20430   Vibrio fluvialis Isc7A WMN57270.1     1
 NAF16_15795   Vibrio fluvialis V13 WPK55160.1     1
 FIU11_21005   Vibrio furnissii FDAARGOS_777 QDC95176.1     1
 O8413_21580   Vibrio furnissii MT14 WHR53368.1     1
 vfu_B01217   Vibrio furnissii NCTC 11218 ADT89403.1     1
 IUJ52_16630   Vibrio furnissii PartQ-Vfurnissii-RM8376 UON50612.1     1
 QSU95_18050   Vibrio furnissii VFBJ05 WJG24383.1     1
 LUM42_18355   Vibrio furnissii VFN3 UHJ62967.1     1
 BSQ33_05645   Vibrio gazogenes ATCC 43942 ASA55255.1     1
 MKS89_12420   Vibrio gazogenes PB1 USP13209.1     1
 KNV97_03690   Vibrio ostreae OG9-811 QXO15534.1     1
 RK51_023445   Vibrio parahaemolyticus 10329 AUT89698.1     1
 GH799_18470   Vibrio parahaemolyticus 10329 QGG35081.1     1
 D0871_21860   Vibrio parahaemolyticus 160807 AYO06943.1     1
 BMI84_15085   Vibrio parahaemolyticus 1682 APU75365.1     1
 IHE41_16120   Vibrio parahaemolyticus 17-VB00214 UYW23631.1     1
 GNY17_22190   Vibrio parahaemolyticus 19-021-D1 QGT93574.1     1
 IF561_16490   Vibrio parahaemolyticus 19-VB00998 UYW18069.1     1
 I5M77_21285   Vibrio parahaemolyticus 20-082A3 QPM88384.1     1
 K9N54_21860   Vibrio parahaemolyticus 20-082E4 UAY44282.1     1
 Vp2S01_A0069 (OgL)   Vibrio parahaemolyticus 20130629002S01 AWG85555.1     1
 EHC70_18315   Vibrio parahaemolyticus 20140624012-1 QHG96121.1     1
 EHC64_19125   Vibrio parahaemolyticus 20140722001-1 QHH01211.1     1
 EHC66_18710   Vibrio parahaemolyticus 20140829008-1 QHH06322.1     1
 EHC68_21240   Vibrio parahaemolyticus 20151116002-3 QHH17320.1     1
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