Glycoside Hydrolase Family 43 / Subf 30

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (145); Uniprot accession (27);
All (141) Bacteria (111) Eukaryota (30)
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 IMCC26256_11186   Actinobacteria bacterium IMCC26256 AKL72490.1     30
 SAMN04489716_3556   Actinoplanes derwentensis DSM 43941 SDT38525.1     30
 AFR_39655   Actinoplanes friuliensis DSM 7358 AGZ46185.1     30
 AMIS_46900   Actinoplanes missouriensis 431 BAL89910.1     30
 L083_3309   Actinoplanes sp. N902-109 AGL16819.1     30
 ACWT_3647   Actinoplanes sp. SE50 ATO83062.1     30
 ACPL_3775   Actinoplanes sp. SE50/110 AEV84670.1
SLM00469.1
    30
 SAMN04489717_2369   Actinopolymorpha singaporensis DSM 22024 SDS33596.1     30
 SAMN04489717_3700   Actinopolymorpha singaporensis DSM 22024 SDS73887.1     30
 SAMN04489717_2530   Actinopolymorpha singaporensis DSM 22024 SDS38650.1     30
 AJAP_12115   Amycolatopsis japonica MG417-CF17 AIG75305.1     30
 AJAP_22755   Amycolatopsis japonica MG417-CF17 AIG77406.1     30
 SAMN04489733_2502   Amycolatopsis keratiniphila FH 1893 SDU26119.1     30
 SAMN04489733_0321   Amycolatopsis keratiniphila FH 1893 SDU00682.1     30
 BB31_29175   Amycolatopsis lurida NRRL 2430 AJK57236.1     30
 BB31_08610   Amycolatopsis lurida NRRL 2430 AJK53456.1     30
 B737_3219   Amycolatopsis mediterranei RB AGT83883.1     30
 RAM_16550   Amycolatopsis mediterranei S699 AEK41798.1
AFO76755.1
    30
 AMED_3254   Amycolatopsis mediterranei U32 ADJ45044.1 D8I4A3   30
 AMETH_3329   Amycolatopsis methanolica 239 AIJ23421.1     30
 SD37_30385   Amycolatopsis orientalis B-37 ANN19504.1     30
 AORI_5356   Amycolatopsis orientalis HCCB10007 AGM07939.1     30
 AORI_3295   Amycolatopsis orientalis HCCB10007 AGM05880.1     30
 ANT_11430   Anaerolinea thermophila UNI-1 BAJ63177.1     30
 AA314_07757   Archangium gephyra DSM 2261 AKJ06131.1     30
 SAMN04489747_0603   Auraticoccus monumenti MON 2.2 SDD27676.1     30
 SAMN04489747_3186   Auraticoccus monumenti MON 2.2 SDE35241.1     30
 SAMN04489747_1110   Auraticoccus monumenti MON 2.2 SDD51075.1     30
 CFK41_15980   Brachybacterium ginsengisoli DCY80 ATG56110.1     30
 BH708_14610   Brachybacterium sp. P6-10-X1 APX34928.1     30
 BZG35_12355   Brevundimonas sp. LM2 AQR63519.1     30
 CLDAP_36410   Caldilinea aerophila DSM 14535 = NBRC 104270 BAM01681.1     30
 CBR64_05900   Cellulosimicrobium cellulans PSBB019 ARU51093.1     30
 B8281_05615   Cellulosimicrobium sp. TH-20 ARK04296.1     30
 COCOR_02901   Corallococcus coralloides DSM 2259 AFE04909.1     30
 B7495_01555   Cryobacterium sp. LW097 ASD20952.1     30
 Deide_02520   Deinococcus deserti VCD115 ACO45061.1 C1CZ23   30
 DFI_17870   Deinococcus ficus CC-FR2-10 ASN83044.1     30
 Dgeo_2723   Deinococcus geothermalis DSM 11300 ABF44156.1 Q1J2X8   30
 DGo_CA0695 (fragment)   Deinococcus gobiensis I-0 AFD24622.1     30
 Deima_0140   Deinococcus maricopensis DSM 21211 ADV65804.1     30
 Deima_0449   Deinococcus maricopensis DSM 21211 ADV66109.1     30
 Deipe_0910   Deinococcus peraridilitoris DSM 19664 AFZ66479.1     30
 Deipe_0911   Deinococcus peraridilitoris DSM 19664 AFZ66480.1     30
 QR90_14210   Deinococcus swuensis DY59 AIZ45975.1     30
 FRAAL6299   Frankia alni ACN14a CAJ64922.1 Q0RCA5   30
 Francci3_3976   Frankia casuarinae sp. CcI3 ABD13326.1 Q2J5W6   30
 Franean1_4281   Frankia sp. EAN1pec ABW13665.1 A8L9G2   30
 SAMN04488563_6531   Jiangella alkaliphila DSM 45079 SDU83389.1     30
 SAMN04515669_0705   Jiangella sp. DSM 45060 SDS26643.1     30
 SAMN04515669_1231   Jiangella sp. DSM 45060 SDS49796.1     30
 AOZ06_23440   Kibdelosporangium phytohabitans KLBMP1111 ALG09468.1     30
 ORF   Kibdelosporangium sp. MJ126-NF4 CTQ97048.1     30
 Kfla_0050   Kribbella flavida DSM 17836 ADB29179.1 D2PQJ2   30
 Kfla_3048   Kribbella flavida DSM 17836 ADB32112.1 D2Q2Y7   30
 AKJ09_08671   Labilithrix luteola DSM 27648 AKV02008.1     30
 LG36_1402   Lactococcus lactis AI06 AIS03997.1     30
 kw2_0916   Lactococcus lactis subsp. cremoris KW2 AGV72874.1     30
 llmg_1608   Lactococcus lactis subsp. cremoris MG1363 CAL98182.1 A2RLL4   30
 LLNZ_08270   Lactococcus lactis subsp. cremoris NZ9000 ADJ60596.1 D8KJK0   30
 LLKF_0951   Lactococcus lactis subsp. lactis KF147 ABX75732.1 A9QSP6   30
 NCDO2118_0943   Lactococcus lactis subsp. lactis NCDO 2118 AII12431.1     30
 SAMN04515683_2640   Leifsonia sp. 157MF SDK19681.1     30
 SAMN04515690_3678   Leifsonia sp. 197AMF SDH69024.1     30
 SAMN04515680_0317   Leifsonia sp. 21MFCrub1.1 SEA42714.1     30
 SAMN04515684_0111   Leifsonia sp. 466MF SDI70827.1     30
 SAMN04515685_2624   Leifsonia sp. 467MF SEN35001.1     30
 SAMN04515686_2312   Leifsonia sp. 509MF SDN73237.1     30
 SAMN04515691_0342   Leifsonia sp. 98AMF SFL70036.1     30
 A0130_09170   Leifsonia xyli SE134 ANF31824.1     30
 VV02_20835   Luteipulveratus mongoliensis MN07-A0370 AKU17719.1     30
 B2G67_00340   Microbacterium foliorum 122 AQY00113.1     30
 SAMN04489812_4935   Microlunatus soli DSM 21800 SDT27841.1     30
 SAMN04489812_4490   Microlunatus soli DSM 21800 SDT18687.1     30
 GA0070611_3984   Micromonospora auratinigra DSM 44815 SBT48190.1     30
 GA0070607_3144   Micromonospora coriariae DSM 44875 SCE91364.1     30
 GA0070614_2647   Micromonospora coxensis DSM 45161 SCG56516.1     30
 GA0070609_5215   Micromonospora echinaurantiaca DSM 43904 SCG76221.1     30
 GA0070609_4404   Micromonospora echinaurantiaca DSM 43904 SCG69340.1     30
 GA0070610_0166   Micromonospora echinofusca DSM 43913 SCG13974.1     30
 GA0070610_4155   Micromonospora echinofusca DSM 43913 SCG17833.1     30
 GA0070618_2245   Micromonospora echinospora DSM 43816 SCE96274.1     30
 GA0070618_2724   Micromonospora echinospora DSM 43816 SCF03040.1     30
 GA0070618_5644   Micromonospora echinospora DSM 43816 SCF35445.1     30
 GA0070613_2439   Micromonospora inositola DSM 43819 SCG54591.1     30
 GA0070620_5012   Micromonospora krabiensis DSM 45344 SBV29440.1     30
 GA0070623_0462   Micromonospora rifamycinica DSM 44983 SCG38633.1     30
 GA0074704_5727   Micromonospora siamensis DSM 45097 SCG78792.1     30
 CO540_22590   Micromonospora sp. WMMA2032 ATO16276.1     30
 GA0070619_5117   Micromonospora zamorensis DSM 45600 SCG65187.1     30
 MODMU_0662   Modestobacter marinus BC501 CCH86119.1     30
 Noca_4511   Nocardioides sp. JS614 ABL84008.1 A1SQC3   30
 KR76_24095   Pimelobacter simplex VKM Ac-2033D AIY19089.1     30
 KR76_08615   Pimelobacter simplex VKM Ac-2033D AJR18259.1     30
 AAW51_5064   [Polyangium] brachysporum DSM 7029 AKJ31755.1     30
 Sala_0739   Sphingopyxis alaskensis RB2256 ABF52459.1 Q1GV63   30
 Snas_4087   Stackebrandtia nassauensis DSM 44728 ADD43739.1 D3Q0Y9   30
 Snas_0206   Stackebrandtia nassauensis DSM 44728 ADD39925.1 D3Q1S7   30
 Snas_3932   Stackebrandtia nassauensis DSM 44728 ADD43586.1 D3PZP9   30
 Snas_2698   Stackebrandtia nassauensis DSM 44728 ADD42375.1 D3Q7A4   30
 SMD44_00375   Streptomyces alboflavus MDJK44 ARX80977.1     30
 SLNHY_7201   Streptomyces albus BK3-25 AOU81892.1     30
 SLNWT_7215   Streptomyces albus DSM 41398 AJE87591.1     30
 A4G23_05301   Streptomyces rubrolavendulae MJM4426 AOT62405.1     30
 AA958_33720   Streptomyces sp. CNQ-509 AKH86368.1     30
 B1K54_31930   Streptomyces sp. fd1-xmd AQT76964.1     30
 CAG99_25920 (fragment)   Streptomyces sp. SCSIO 03032 ARQ71812.1     30
 BN2537_15233   Streptomyces venezuelae ATCC 15439 CUM43134.1     30
 AQF52_0995   Streptomyces venezuelae ATCC 15439 ALO06591.1     30
 BKM78_04430   Tessaracoccus sp. T2.5-30 AQX17140.1     30
 Tcur_0628   Thermomonospora curvata DSM 43183 ACY96223.1 D1A4I8   30
Eukaryota
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 An07g04930   Aspergillus niger CBS 513.88 CAK39412.1 A2QNA3   30
 An15g03550 (possible fragment)   Aspergillus niger CBS 513.88 CAK42430.1 A2R5D5   30
 AO090005000064   Aspergillus oryzae RIB40 BAE55183.1 Q2UTD2   30
 AO090026000804   Aspergillus oryzae RIB40 BAE60205.1 Q2UE10   30
 FFUJ_02646   Fusarium fujikuroi IMI 58289 CCT65681.1     30
 FFUJ_10081   Fusarium fujikuroi IMI 58289 CCT73237.1     30
 FFUJ_11037   Fusarium fujikuroi IMI 58289 CCT74963.1     30
 unnamed protein product   Fusarium graminearum PH-1 CEF85517.1     30
 MG07520.4   Magnaporthe oryzae 70-15 XP_367609.1 G4N1Q4   30
 BN887_05463   Melanopsichium pennsylvanicum 4 CDI55427.1     30
 NCU00852.1   Neurospora crassa OR74A EAA34736.1
XP_325032.1
Q7SD87   30
 α-L-arabinofuranosidase 4   Penicillium oxalicum GZ-2 AIO06738.1     30
 PP122   Penicillium paxilli PN2013 ADO29936.1 E3UBL8   30
 Pc12g01330   Penicillium rubens Wisconsin 54-1255 CAP79760.1 B6GYS2   30
 ORF   Phanerochaete chrysosporium BKM-F-1767 AFW16060.1     30
 ORF   Podospora anserina S mat+ CDP25259.1     30
 unnamed protein product   Podospora anserina S mat+ CAP59767.1
CDP22411.1
B2A9M0   30
 sr15773   Sporisorium reilianum SRZ2 CBQ69308.1     30
 SPSC_04997   Sporisorium scitamineum SscI8 CDU25163.1     30
 MYCTH_2300677   Thermothelomyces thermophila ATCC 42464 AEO56123.1     30
 THITE_2131460   Thielavia terrestris NRRL 8126 AEO69907.1     30
 UBRO_07001   Ustilago bromivora UB2112 SAM85693.1     30
 ZT1A5_G10180   Zymoseptoria tritici ST99CH_1A5 SMY28734.1     30
 ZT1A5_G10745   Zymoseptoria tritici ST99CH_1A5 SMY29298.1     30
 ZT1E4_G10774   Zymoseptoria tritici ST99CH_1E4 SMR60809.1     30
 ZT1E4_G10245   Zymoseptoria tritici ST99CH_1E4 SMR60280.1     30
 ZT3D1_G10156   Zymoseptoria tritici ST99CH_3D1 SMR63391.1     30
 ZT3D1_G10706   Zymoseptoria tritici ST99CH_3D1 SMR63941.1     30
 ZT3D7_G10225   Zymoseptoria tritici ST99CH_3D7 SMQ55070.1     30
 ZT3D7_G10763   Zymoseptoria tritici ST99CH_3D7 SMQ55608.1     30
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