Glycoside Hydrolase Family 140

Activities in FamilyEndo-β-1,2-apiosidase (EC 3.2.1.-);
Mechanism Retaining e
ClanGH-A
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/Basenot known
Catalytic Proton Donornot known
NoteCreated after Ndeh et al., Nature (2017) 544(7648):65-70 (PMID=28329766)
External resourcesCAZypedia;
Statistics GenBank accession (1341); Uniprot accession (1); PDB accession (4); 3D entries (3); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 SAMCCGM7_pC1328   Sinorhizobium americanum CCGM7 APG88519.1    
 AB395_00005546   Sinorhizobium fredii CCBAU 45436 AWI60723.1    
 SF83666_b58170   Sinorhizobium fredii CCBAU 83666 ASY72466.1    
 SFGR64A_24820   Sinorhizobium fredii GR64 WOS64789.1    
 NGR_b13550   Sinorhizobium fredii NGR234 ACP22806.1    
 CA265_08455   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS39680.1    
 SCB77_09265   Sphingobacterium bambusae KACC 22910 WPL50633.1    
 NCTC13534_04212   Sphingobacterium daejeonense NCTC13534 VTQ03181.1    
 SAMEA4412673_01658   Sphingobacterium mizutaii NCTC12149 SNV48981.1    
 K2F45_24940   Sphingobacterium siyangense FTD2 UQA74985.1    
 Sph21_2311   Sphingobacterium sp. 21 ADZ78865.1    
 BV902_25785   Sphingobacterium sp. B29 APU99309.1    
 G6053_27735   Sphingobacterium sp. DR205 QIH36422.1    
 PQ465_01555   Sphingobacterium sp. KACC 22765 WDF69076.1    
 PZ892_12880   Sphingobacterium sp. WM WFB62568.1    
 NCTC11429_02097   Sphingobacterium thalpophilum NCTC11429 VTR38887.1    
 H3V42_14950   Sphingobium yanoikuyae A3 QNG48694.1    
 PAE53_17460   Sphingobium yanoikuyae CC4533 WBQ15696.1    
 U0025_18685   Sphingobium yanoikuyae HAMBI_1842 WQE06315.1    
 A6768_20280   Sphingobium yanoikuyae S72 ATI82106.1    
 EBF16_11330   Sphingobium yanoikuyae SJTF8 AYO77418.1    
 LZK98_19580   Sphingomonas cannabina DM2-R-LB4 UIJ45215.1    
 CVN68_12570   Sphingomonas psychrotolerans Cra20 ATY32706.1    
 PIB19_21985   Sphingomonas sp. 7/4-4 WBY07891.1    
 BRX40_01520   Sphingomonas sp. ABOJV APR51283.1    
 O3305_08265   Sphingomonas sp. NIBR02145 NIBR 02145 WHU04568.1    
 O3305_08225   Sphingomonas sp. NIBR02145 NIBR 02145 WHU04561.1    
 FPZ54_00315   Sphingomonas suaedae XS-10 QDX28023.1    
 G8759_24865   Spirosoma aureum BT328 QIP15633.1    
 G8759_14555   Spirosoma aureum BT328 QIP13748.1    
 G8759_16015   Spirosoma aureum BT328 QIP14011.1    
 G8759_13830   Spirosoma aureum BT328 QIP13625.1    
 GJR95_23835   Spirosoma endbachense I-24 QHV97849.1    
 GJR95_36460   Spirosoma endbachense I-24 QHW00180.1    
 GJR95_23870   Spirosoma endbachense I-24 QHV97855.1    
 GJR95_30770   Spirosoma endbachense I-24 QHV99122.1    
 GJR95_35290   Spirosoma endbachense I-24 QHV99959.1    
 GJR95_23845   Spirosoma endbachense I-24 QHV97850.1    
 H3H32_06720   Spirosoma foliorum KCTC 72228 QMW04620.1    
 H3H32_30110   Spirosoma foliorum KCTC 72228 QMW02145.1    
 Slin_6336   Spirosoma linguale DSM 74 ADB42295.1    
 AWR27_15605   Spirosoma montaniterrae DY10 AQG80623.1    
 AWR27_00615   Spirosoma montaniterrae DY10 AQG77981.1    
 AWR27_01480   Spirosoma montaniterrae DY10 AQG78138.1    
 AWR27_20670   Spirosoma montaniterrae DY10 AQG81514.1    
 LQ777_09295   Spirosoma oryzicola RHs26 UHG93079.1    
 LQ777_09265   Spirosoma oryzicola RHs26 UHG93073.1    
 LQ777_26235   Spirosoma oryzicola RHs26 UHG94070.1    
 CWM47_23365   Spirosoma pollinicola HA7 AUD04523.1    
 SD10_13565   Spirosoma radiotolerans DG5A AKD55777.1    
 HH216_05650   Spirosoma rhododendri CJU-R4 QJD81256.1    
 EXU85_19200   Spirosoma sp. KCTC 42546 QDK80618.1    
 EXU85_34795 (fragment)   Spirosoma sp. KCTC 42546 QDK83492.1    
 EXU85_34795 (fragment)   Spirosoma sp. KCTC 42546 QDK83492.1    
 LN737_19985   Spirosoma sp. KNUC1025 UFH52694.1    
 LN737_25485   Spirosoma sp. KNUC1025 UFH53695.1    
 HU175_10265   Spirosoma sp. KUDC1026 QKZ12996.1    
 WBJ53_24480   Spirosoma sp. SC4-14 WXC14138.1    
 WBJ53_06885   Spirosoma sp. SC4-14 WXC16934.1    
 WBJ53_24470   Spirosoma sp. SC4-14 WXC14136.1    
 HNV11_23195   Spirosoma taeanense TS118 QJW92073.1    
 SAMN06298216_1613   Spirosomataceae bacterium TFI 002 SOE21141.1    
 SAMN06298216_1869   Spirosomataceae bacterium TFI 002 SOE21399.1    
 SAMN06298216_1608   Spirosomataceae bacterium TFI 002 SOE21136.1    
 SAMEA4412692_02145   Streptococcus merionis NCTC13788 SNU91086.1    
 RJD36_08470   Streptococcus pasteurianus WUSP082 WOO57170.1    
 CXR04_34415   Streptomyces sp. CMB-StM0423 AUH44605.1    
 HUV60_003835   Streptomyces sp. KMM 9044 WAX76921.1    
 R2B38_47710   Streptomyces sp. N50 WOX16498.1    
 DMB38_30920   Streptomyces sp. WAC 06738 AZM49602.1    
 ORF   Streptomyces sp. WM6352 AGZ93918.1    
 NQ490_09430   Subdoligranulum variabile DSM 15176 UWP67164.1    
 SCL_1703   Sulfuricaulis limicola HA5 BAV34006.1    
 PXH66_12495   Synoicihabitans lomoniglobus LMO-M01 WED63149.1    
 ElP_75050   Tautonia plasticadhaerens ElP QDV39536.1    
 ElP_62900   Tautonia plasticadhaerens ElP QDV38338.1    
 ElP_56050   Tautonia plasticadhaerens ElP QDV37663.1    
 DSM104635_01771   Terricaulis silvestris 0127_4 QGZ94936.1    
 Q2T46_06700   Thermoanaerobacterium sp. CMT5567-10 WKV10116.1    
 Theco_1268   Thermobacillus composti KWC4 AGA57434.1    
 Tter_2666   Thermobaculum terrenum ATCC BAA-798 ACZ43554.1    
 Tter_1907   Thermobaculum terrenum ATCC BAA-798 ACZ42813.1    
 ODU73_001040   Thermoclostridium stercorarium RKWS1 UZQ86583.1    
 CSTERLE_04935   Thermoclostridium stercorarium subsp. leptospartum DSM 9219 ANX00976.1    
 Cst_c10510   Thermoclostridium stercorarium subsp. stercorarium DSM 8532 AGI39079.1
AGC68049.1
   
 CSTERTH_04975   Thermoclostridium stercorarium subsp. thermolacticum DSM 2910 ANW98439.1    
 OXH18_04745   Thermocoleostomius sinensis A174 WAL61310.1    
 THTE_3224   Thermogutta terrifontis R1 ASV75826.1    
 CTN_1504 (fragment)   Thermotoga neapolitana DSM 4359 ACM23680.1    
 Tpet_1688   Thermotoga petrophila RKU-1 ABQ47693.1    
 CELL2_08745 (fragment)   Thermotoga sp. Cell2 AIY88979.1    
 IDJ81_03370   Tsuneonella flava SS-21NJ QSB45195.1    
 P0M28_21470   Tunicatimonas pelagia NBRC 107804 WKN41609.1    
 P0M28_16680   Tunicatimonas pelagia NBRC 107804 WKN40676.1    
 P0M28_22020   Tunicatimonas pelagia NBRC 107804 WKN41719.1    
 P0M28_14270   Tunicatimonas pelagia NBRC 107804 WKN46116.1    
 P0M28_28375   Tunicatimonas pelagia NBRC 107804 WKN42959.1    
 GMBLW1_22740   Tuwongella immobilis VTR99146.1    
 GMBLW1_22740   Tuwongella immobilis MBLW1 VIP01686.1    
 ORF   uncultured bacterium AOE12084.1    
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