| CAZymes |
Glycoside hydrolase | GH1 to GH145 |
| Polysaccharide lyase | PL1 to PL27 |
| Carbohydrate-binding module | CBM1 to CBM81 |
| Carbohydrate esterase | CE1 to CE16 |
Sulfatase  | Sulf_1 to Sulf_4 |
Peptidase  | Pept_ + 2-letter MEROPS clan |
Integrase | Int |
| Regulators |
Extracytoplasmic function sigma factor | ECF-σ |
| Extracytoplasmic function anti-sigma factor | Anti-σ |
| Hybrid two-component system | HTCS |
| SusR-like regulator | SusR |
| AraC-like transcriptional activator | AraC |
| GntR-like transcriptional regulator | GntR |
| Monosaccharide metabolism |
Regulator/ORF/kinase family  | ROK |
Epimerase  | EPI |
Transporters |
Major facilitator family transporter  | MFS |
ATP-binding cassette transporter  | ABC |
| SusC-like TonB-dependent transporter | SusC |
| PUL marker gene | SusD-like outermembrane-binding protein | SusD |