CAZy Family PL9

CAZy ~ Carbohydrate-Active enZymes

Families

Glycoside Hydrolases

GlycosylTransferases

Polysaccharide Lyases

Carbohydrate Esterases

Carbohydrate-Binding Modules


Polysaccharide Lyase Family 9


Known Activities	pectate lyase (EC 4.2.2.2); exopolygalacturonate lyase (EC 4.2.2.9).

3D Structure Status	Fold: parallel -helix

Statistics	CAZy Entries (66); GenBank/GenPept (82); Swissprot (17); 3D(1) : PDB(1);

Taxonomy	Bacteria(64); Eukaryota(2);

3D Display	PL9_3D


Bacteria
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
Acid345_0662	n.d.	Acidobacteria bacterium Ellin345	CP000360	ABF39667.1
Asuc_1469	n.d.	Actinobacillus succinogenes 130Z	CP000746	ABR74828.1
RBAM_032390	n.d.	Bacillus amyloliquefaciens FZB42	CP000560	ABS75569.1
ABC3268	n.d.	Bacillus clausii KSM-K16	AP006627	BAD65802.1
BH0494 (PelX)	n.d.	Bacillus halodurans C-125	AP001508 NC_002570	BAB04213.1 NP_241360.1	Q9KFI5
BLi02095 or BL01495 (YwoF)	n.d.	Bacillus licheniformis DSM 13 ATCC 14580	CP000002 AE017333	AAU23620.1 AAU40984.1
YwoF (fragment)	n.d.	Bacillus megaterium DSM 319	AJ515540	CAD56682.1
BPUM_3499	n.d.	Bacillus pumilus SAFR-032	CP000813	ABV64147.1
pectate lyase H (Pel15H)	4.2.2.2	Bacillus sp. KSM-P15	AB028878	BAA81753.1	Q9XDT1
BT4183	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016944 NC_004663	AAO79288.1 NP_813094.1
BT4170	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016944 NC_004663	AAO79275.1 NP_813081.1
CAC0574 (fragment)	n.d.	Clostridium acetobutylicum ATCC 824	AE007572 NC_003030	AAK78553.1 NP_347213.1	Q97LI6
pectate lyase (CAC1968) (probable fragment)	4.2.2.2	Clostridium acetobutylicum ATCC 824	AE007701 NC_003030	AAK79928.1 NP_348588.1	Q97HP2
CAP0056	n.d.	Clostridium acetobutylicum ATCC 824	AE001438 NC_001988	AAK76802.1 NP_149220.1	Q97TP2
CAC3387	n.d.	Clostridium acetobutylicum ATCC 824	AE007835 NC_003030	AAK81317.1 NP_349977.1	Q97DT5
CAC0812	n.d.	Clostridium acetobutylicum ATCC 824	AE007597 NC_003030	AAK78788.1 NP_347448.1	Q97KV4
pectate lyase A (PelA)	4.2.2.2	Clostridium cellulovorans	AF105330	AAG59609.1	Q9AQF3
Cphy_3869	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX44216.1
Cphy_1888	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX42257.1
Cphy_2919	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX43277.1
Cphy_1612	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX41986.1
pectate lyase 9A - Pel9A	4.2.2.2	Clostridium stercorarium F-9	AB106865	BAC87940.1
Cthe_2179	n.d.	Clostridium thermocellum ATCC 27405	CP000568	ABN53381.1
CHU_0455	n.d.	Cytophaga hutchinsonii ATCC 33406	CP000383	ABG57744.1
Ent638_4134	n.d.	Enterobacter sp. 638	CP000653	ABP62787.1
Sequence 4275 from patent US 6583275	n.d.	Enterococcus faecium	-	AAQ43717.1
ECA2553	n.d.	Erwinia carotovora subsp. atroseptica SCRI1043	BX950851	CAG75452.1
ECA4510 (PelX)	n.d.	Erwinia carotovora subsp. atroseptica SCRI1043	BX950851	CAG77405.1
exopolygalacturonate lyase (PelX)	4.2.2.9	Erwinia chrysanthemi 3937	Y16797	CAB39324.1	Q9Z5P8
pectate lyase (PelL) - Pel9A	4.2.2.2	Erwinia chrysanthemi 3937	X81136	CAA57041.1	Q47473	1RU4	[A]
exopolygalacturonate lyase (PelX)	4.2.2.9	Erwinia chrysanthemi EC16	M62739	AAA24850.1	P22751
pectate lyase (PelL)	4.2.2.2	Erwinia chrysanthemi EC16	L42248	AAA99476.1	Q47473 Q59421
pectate lyase (PelL1)	4.2.2.2	Erwinia chrysanthemi PY35	AF171228	AAF05308.1	Q9RP65
c0323	n.d.	Escherichia coli CFT073	AE016755 NC_004431	AAN78811.1 NP_752267.1
Exig_1512	n.d.	Exiguobacterium sibiricum 255-15	CP001022	ACB60972.1
pectate lyase (PelX)	n.d.	Klebsiella oxytoca	AF454849	AAL51034.1	Q8VQM5
Bsph_3355	n.d.	Lysinibacillus sphaericus C3-41	CP000817	ACA40849.1
MS1742	n.d.	Mannheimia succiniciproducens MBEL55E	AE016827	AAU38349.1
Meso_0099	n.d.	Mesorhizobium sp. BNC1	CP000390	ABG61504.1
Mext_3575	n.d.	Methylobacterium extorquens PA1	CP000908	ABY31954.1
Mext_3576	n.d.	Methylobacterium extorquens PA1	CP000908	ABY31955.1
MS131 (fragment)	n.d.	Microscilla sp. PRE1	AF339846 NC_002806	AAK62853.1 NP_116819.1	Q93PA0
Oter_1931	n.d.	Opitutus terrae PB90-1	CP001032	ACB75214.1
PelX (fragment)	n.d.	Pectobacterium carotovorum subsp. carotovorum MFCL0	DQ073609	AAZ05893.1
PTH_1102	n.d.	Pelotomaculum thermopropionicum SI	AP009389	BAF59283.1
PBPRB1725 (PelX)	n.d.	Photobacterium profundum SS9	CR378680	CAG23585.1
Pnap_3115	n.d.	Polaromonas naphthalenivorans CJ2	CP000529	ABM38413.1
Pnap_3111	n.d.	Polaromonas naphthalenivorans CJ2	CP000529	ABM38410.1
PSPPH_0883	n.d.	Pseudomonas syringae pv. phaseolicola 1448A; BAA-978	CP000058	AAZ34634.1
Psyr_0852	n.d.	Pseudomonas syringae pv. syringae B728a	CP000075	AAY35910.1
RHECIAT_CH0001980	n.d.	Rhizobium etli CIAT 652	CP001074	ACE90941.1
Sde_2946 - Pel9A	n.d.	Saccharophagus degradans 2-40	CP000282	ABD82203.1
Sde_3238	n.d.	Saccharophagus degradans 2-40	CP000282	ABD82495.1
sce6360	n.d.	Sorangium cellulosum So ce56	AM746676	CAN96527.1
SAV6382	n.d.	Streptomyces avermitilis MA-4680	BA000030 NC_003155	BAC74093.1 NP_827558.1
SAV6378	n.d.	Streptomyces avermitilis MA-4680	BA000030 NC_003155	BAC74089.1 NP_827554.1
SCO7228 or SC2H12.27c	n.d.	Streptomyces coelicolor A3(2)	AL359215 NC_003888	CAB94651.1 NP_631284.1	Q9K457
Sfum_2876	n.d.	Syntrophobacter fumaroxidans MPOB	CP000478	ABK18553.1
VPA0086	n.d.	Vibrio parahaemolyticus RIMD 2210633	AP005084 NC_004605	BAC61429.1 NP_799596.1
VVA1380	n.d.	Vibrio vulnificus YJ016	AP005350 NC_005140	BAC97406.1 NP_937436.1	Q7MCK6
XCV2278	n.d.	Xanthomonas campestris pv. vesicatoria str. 85-10	AM039952	CAJ23955.1
XOO2265 (probable fragment)	n.d.	Xanthomonas oryzae pv. oryzae KACC10331	AE013598	AAW75519.1
XOO2130 (probable fragment)	n.d.	Xanthomonas oryzae pv. oryzae MAFF 311018	AP008229	BAE68885.1
PXO_00565 (fragment)	n.d.	Xanthomonas oryzae pv. oryzae PXO99A	CP000967	ACD58928.1


Eukaryota
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
AN2537.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000043	EAA64642.1
AO090038000131	n.d.	Aspergillus oryzae RIB 40	AP007169	BAE63970.1