CAZy Family PL4

CAZy ~ Carbohydrate-Active enZymes

Families

Glycoside Hydrolases

GlycosylTransferases

Polysaccharide Lyases

Carbohydrate Esterases

Carbohydrate-Binding Modules


Polysaccharide Lyase Family 4


Known Activities	rhamnogalacturonan lyase (EC 4.2.2.-).

3D Structure Status	Fold: -sandwitch + -sheet

Statistics	CAZy Entries (41); GenBank/GenPept (82); Uniprot (17); 3D(1) : PDB(1);

Taxonomy	Bacteria(9); Eukaryota(32);

3D Display	PL4_3D


Bacteria
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
ECA0804 (RhiE)	n.d.	Erwinia carotovora subsp. atroseptica SCRI1043	BX950851	CAG73718.1
rhamnogalacturonate lyase (RhiE)	4.2.2.-	Erwinia chrysanthemi 3937	AJ438339	CAD27359.1	Q8RJP2
Oter_2208	n.d.	Opitutus terrae PB90-1	CP001032	ACB75491.1
SAV2108	n.d.	Streptomyces avermitilis MA-4680	AP005029 NC_003155	BAC69819.1 NP_823284.1
XAC3505 (RhgB)	n.d.	Xanthomonas axonopodis pv. citri str. 306	AE011999 NC_003919	AAM38348.1 NP_643812.1
XCV3632	n.d.	Xanthomonas campestris pv. vesicatoria str. 85-10	AM039952	CAJ25363.1
XOO1078 (RhgB)	n.d.	Xanthomonas oryzae pv. oryzae KACC10331	AE013598	AAW74332.1
XOO0978	n.d.	Xanthomonas oryzae pv. oryzae MAFF 311018	AP008229	BAE67733.1
PXO_02430	n.d.	Xanthomonas oryzae pv. oryzae PXO99A	CP000967.1	ACD60718.1


Eukaryota
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
At1g09910/F21M12.30	n.d.	Arabidopsis thaliana	AC000132 AK118420 NC_003070	AAB60743.1 BAC43029.1 NP_172462.1	O04512 Q8GX61
At1g09880/F21M12.27	n.d.	Arabidopsis thaliana	AC000132 NM_100862	AAB60741.1 NP_172459.1	O04510
At2g22620/T9I22.6	n.d.	Arabidopsis thaliana	AC006340 BT012575 AK176148 NM_127827	AAD15570.1 AAS99719.1 BAD43911.1 NP_179847.1	Q9ZQ51
At1g09890/F21M12.28 (probable fragment)	n.d.	Arabidopsis thaliana	AC000132 NC_003070	AAB60742.1 NP_172460.1	O04511
At4g38030/F20D10.150	n.d.	Arabidopsis thaliana	AK221476 AL035538 AL161592 NM_119964	BAD94618.1 CAB37543.1 CAB80468.1 NP_195516.1	Q9SZK3
At4g24430/T22A6.260	n.d.	Arabidopsis thaliana	AY057715 BT015775 BT021099 AL078637 AL161561 NM_118576	AAL15345.1 AAU90065.1 AAX12869.1 CAB45078.1 CAB79353.1 NP_567703.1	Q9STV1 Q93Z90
At4g37950 (LG27/30)	n.d.	Arabidopsis thaliana	BT004121 AK228481 Y16848 AL035538 AL035538 AL161592 AL161592 NM_119956 NM_119957	AAO42144.1 BAF00407.1 CAA76417.1 CAB37535.1 CAB37536.1 CAB80460.1 CAB80461.1 NP_195508.2 NP_195509.1	O65620 Q84W85 Q9SZJ7 Q9SZJ8
rhamnogalacturonan lyase (RhgB)	4.2.2.-	Aspergillus aculeatus KSM 510	L35500	AAA64368.1	Q00019	1NKG	[A]
rhamnogalacturonan lyase (AN6395.2)	4.2.2.-	Aspergillus nidulans FGSC A4	AACD01000108 DQ490501	EAA58417.1 ABF50877.1
rhamnogalacturonan lyase (AN7135.2)	4.2.2.-	Aspergillus nidulans FGSC A4	AACD01000122 DQ490504	EAA61387.1 ABF50880.1
AN3950.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000064	EAA59259.1
AN4139.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000067	EAA59400.1
rhamnogalacturonan lyase A (RglA) (fragment)	n.d.	Aspergillus niger CBS 120.49 / N400	AJ489944	CAD36194.1	Q8NJK5
An14g01130	n.d.	Aspergillus niger CBS 513.88	AM270312	CAK46452.1
An11g00390	n.d.	Aspergillus niger CBS 513.88	AM270218	CAK48272.1
AO090138000119	n.d.	Aspergillus oryzae RIB 40	AP007170	BAE64494.1
AO090012000147 + AO090012000148 (fragments)	n.d.	Aspergillus oryzae RIB 40	AP007161 AP007161	BAE60367.1 BAE60368.1
AO090011000349	n.d.	Aspergillus oryzae RIB 40	AP007171	BAE64864.1
AO090113000057	n.d.	Aspergillus oryzae RIB 40	AP007166	BAE63118.1
CNF04250	n.d.	Cryptococcus neoformans var. neoformans JEC21	AE017346	AAW44398.1
MG06041.4	n.d.	Magnaporthe grisea 70-15	XM_369423	XP_369423.1
MtrDRAFT_AC146709g4v1 + MtrDRAFT_AC146709g3v1	n.d.	Medicago truncatula	AC146709 AC146709 AC146709 AC174360 AC174360	ABE89749.1 ABE89748.1 ABE89748.2 ABP03822.1 ABP03823.1
ORF	n.d.	Medicago truncatula	EU306659	ABY48149.1
MtrDRAFT_AC146709g6v1 + MtrDRAFT_AC146709g5v1	n.d.	Medicago truncatula	AC146709 AC146709 AC174360	ABE89751.1 ABE89750.1 ABP03824.1
MtrDRAFT_AC174360g24v2	n.d.	Medicago truncatula	AC174360	ABP03820.1
NCU05598.1 (Asd-1)	n.d.	Neurospora crassa OR74A	U70861 XM_325452	AAB39649.1 XP_325453.1	P78710 Q7RVB7
Os08g0554100	n.d.	Oryza sativa (japonica cultivar-group)	AP004044 AP005251 AP004044 AP008214	BAD09141.1 BAD10227.1 BAD33010.1 BAF24378.1
Os08g0554300	n.d.	Oryza sativa (japonica cultivar-group)	AP005251 AP004044 AP005251 AP008214	BAD10230.1 BAD33013.1 BAD73821.1 BAF24379.1
Os11g0134100	n.d.	Oryza sativa (japonica cultivar-group)	AP008217	BAF27519.1
Os12g0131900	n.d.	Oryza sativa (japonica cultivar-group)	AP008218	BAF29096.1
unnamed protein product	n.d.	Podospora anserina	CU633456	CAP61756.1
Xucw87	n.d.	Triticum turgidum subsp. dicoccoides	DQ871219	ABI15897.1