CAZy Family PL11

CAZy ~ Carbohydrate-Active enZymes

Glycoside Hydrolases

GlycosylTransferases

Polysaccharide Lyases

Carbohydrate Esterases

Carbohydrate-Binding Modules

Acknowledgments


Polysaccharide Lyase Family 11


Known Activities	rhamnogalacturonan lyase (EC 4.2.2.-).

3D Structure Status	Fold: -propeller

Statistics	CAZy Entries (36); GenBank/GenPept (46); Swissprot (8); 3D(1) : PDB(2);

Taxonomy	Bacteria(35); Eukaryota(1);

3D Display	PL11_3D


Bacteria
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
AM1_2718	n.d.	Acaryochloris marina MBIC11017	CP000828	ABW27718.1
AAur_3434	n.d.	Arthrobacter aurescens TC1	CP000474	ABM06594.1
Arth_3679	n.d.	Arthrobacter sp. FB24	CP000454	ABK05054.1
ABC0393	n.d.	Bacillus clausii KSM-K16	AP006627	BAD62935.1
BH1116	n.d.	Bacillus halodurans C-125	AP001511 NC_002570	BAB04835.1 NP_241982.1	Q9KDU5
BH1114	n.d.	Bacillus halodurans C-125	AP001511 NC_002570	BAB04833.1 NP_241980.1	Q9KDU7
BLi01379 or BL03783 (YesX)	n.d.	Bacillus licheniformis DSM 13 ATCC 14580	CP000002 AE017333	AAU22930.1 AAU40283.1
BLi01376 or BL03786 (YesW)	n.d.	Bacillus licheniformis DSM 13 ATCC 14580	CP000002 AE017333 AX954769	AAU22927.1 AAU40280.1 CAF05577.1
unnamed protein product	n.d.	Bacillus plakortiensis	CS546200	CAN36314.1
rhamnogalacturonan lyase (YesW;BSU07050)	4.2.2.-	Bacillus subtilis subsp. subtilis str. 168	Z99107 NC_000964	CAB12524.1 NP_388586.1		2Z8R 2Z8S	[B] [B]
exo-unsaturated rhamnogalacturonan lyase (YesX;BSU07060)	4.2.2.-	Bacillus subtilis subsp. subtilis str. 168	Z99107 NC_000964	CAB12525.1 NP_388587.1	O31527
BT4175	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016944 NC_004663	AAO79280.1 NP_813086.1
BVU_0176	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR37904.1
BVU_0152	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR37880.1
BVU_0161	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR37889.1
ORF6 (fragment)	n.d.	Caldicellulosiruptor sp. Tok7B.1	AF078039	AAK06390.1	Q9AQG8
rhamnogalacturonan lyase - Rgl11A	4.2.2.-	Cellvibrio japonicus (formerly Pseudomonas cellulosa)	AY026755	AAK20911.1	Q9AF09
CJA_3559 (rhamnogalacturonan lyase) - Rgl11A	4.2.2.-	Cellvibrio japonicus Ueda107	CP000934.1	ACE83155.1
CMS0960	n.d.	Clavibacter michiganensis subsp. sepedonicus ATCC33113	AM849034	CAQ01074.1
rhamnogalacturonan lyase Y - Rgl11Y	4.2.2.-	Clostridium cellulolyticum ATCC 35319	AF316823	AAG45161.1	Q9EYQ1
Cphy_0343	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX40730.1
Cthe_0246	n.d.	Clostridium thermocellum ATCC 27405	CP000568	ABN51485.1
CHU_1157	n.d.	Cytophaga hutchinsonii ATCC 33406	CP000383	ABG58432.1
Fjoh_4222	n.d.	Flavobacterium johnsoniae UW101	CP000685	ABQ07230.1
Haur_3462	n.d.	Herpetosiphon aurantiacus ATCC 23779	CP000875	ABX06098.1
Oter_2241	n.d.	Opitutus terrae PB90-1	CP001032	ACB75524.1
Oter_1343	n.d.	Opitutus terrae PB90-1	CP001032	ACB74628.1
Sde_1650	n.d.	Saccharophagus degradans 2-40	CP000282	ABD80910.1
Orf5	n.d.	Sorangium cellulosum So ce26	U24241	AAK19889.1	Q9ADL3
sce3040	n.d.	Sorangium cellulosum So ce56	AM746676	CAN93199.1
SAV1857	n.d.	Streptomyces avermitilis MA-4680	AP005028 NC_003155	BAC69568.1 NP_823033.1
SCO6542 or SC5C7.27	n.d.	Streptomyces coelicolor A3(2)	AL031515 NC_003888	CAA20639.1 NP_630623.1	O86724
Tfu_2008 (probable fragment)	n.d.	Thermobifida fusca YX	CP000088	AAZ56041.1
Tfu_2009 (fragment)	n.d.	Thermobifida fusca YX	CP000088	AAZ56042.1
Tpet_1678	n.d.	Thermotoga petrophila RKU-1	CP000702	ABQ47683.1


Eukaryota
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
AN2543.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000043	EAA64648.1

Last update: 2008 Aug 01 © Copyright 1998-2008 AFMB - CNRS - Universités Aix-Marseille I & II