CAZy Family GH88

CAZy ~ Carbohydrate-Active enZymes

Families

Glycoside Hydrolases

GlycosylTransferases

Polysaccharide Lyases

Carbohydrate Esterases

Carbohydrate-Binding Modules


Glycoside Hydrolase Family 88


Known Activities	d-4,5 unsaturated -glucuronyl hydrolase (EC 3.2.1.-)

Mechanism	not known

Catalytic Nucleophile/Base	not known

Catalytic Proton Donor	not known

3D Structure Status	Fold: ( / ) ₆

Clan	none

Relevant Links	InterPro PFAM

Statistics	CAZy Entries (91); GenBank/GenPept (118); Swissprot (9); 3D(1) : PDB(7);

Taxonomy	Bacteria(79); Eukaryota(12);

3D Display	GH88_3D


Bacteria
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
Arth_1855	n.d.	Arthrobacter sp. FB24	CP000454	ABK03242.1
pE33L466_0349 (UgL)	n.d.	Bacillus cereus E33L	CP000040	AAY60492.1
ABC3274	n.d.	Bacillus clausii KSM-K16	AP006627	BAD65808.1
BH2054	n.d.	Bacillus halodurans	AP001514 NC_002570	BAB05773.1 NP_242920.1	Q9KB74
unsaturated glucuronyl hydrolase (Ugl)	3.2.1.-	Bacillus sp. GL1	AB019619	BAA84216.1	Q9RC92	1VD5 2AHF 2AHG 2D5J 2FUZ 2FV0 2FV1	[A] [A] [A] [A] [A] [A] [A]
BF0331	n.d.	Bacteroides fragilis NCTC 9343 ATCC 25285 = NCTC 9343	CR626927	CAH06102.1
BF0383	n.d.	Bacteroides fragilis YCH46	AP006841	BAD47132.1
BT3348	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016940 NC_004663	AAO78454.1 NP_812260.1
BT2913	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016938 NC_004663	AAO78019.1 NP_811825.1
BT4658	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016946 NC_004663	AAO79763.1 NP_813569.1
BT0146	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016926 NC_004663	AAO75253.1 NP_809059.1
BVU_0137	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR37867.1
BVU_1749	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR39425.1
BVU_0115	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR37845.1
Csac_2730	n.d.	Caldicellulosiruptor saccharolyticus DSM 8903	CP000679	ABP68298.1
CKO_02447	n.d.	Citrobacter koseri ATCC BAA-895	CP000822	ABV13564.1
CKO_04418	n.d.	Citrobacter koseri ATCC BAA-895	CP000822	ABV15474.1
CPF_0400	n.d.	Clostridium perfringens ATCC 13124	CP000246	ABG82476.1
CPR_0396	n.d.	Clostridium perfringens SM101	CP000312	ABG87664.1
Cphy_0934	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX41318.1
Cphy_0776	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX41163.1
Cphy_3029	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX43386.1
Cphy_0288	n.d.	Clostridium phytofermentans ISDg	CP000885	ABX40675.1
cce_4443	n.d.	Cyanothece sp. ATCC 51142	CP000806	ACB53791.1
Sequence 11059 from patent US 7041814	n.d.	Enterobacter cloacae 15842	-	ABH81216.1
Ent638_3433	n.d.	Enterobacter sp. 638	CP000653	ABP62092.1
EF0812	n.d.	Enterococcus faecalis V583	AE016949 NC_004668 -	AAO80625.1 NP_814555.1 AAR59676.1
EF2235	n.d.	Enterococcus faecalis V583	AE016954 NC_004668 -	AAO81966.1 NP_815896.1 AAR59774.1
EF2272	n.d.	Enterococcus faecalis V583	AE016954 - NC_004668	AAO82000.1 AAR58764.1 NP_815930.1
Sequence 4785 from patent US 6583275	n.d.	Enterococcus faecium	-	AAQ44227.1
Sequence 6328 from patent US 6583275	n.d.	Enterococcus faecium	-	AAQ45770.1
Fjoh_4196	n.d.	Flavobacterium johnsoniae UW101	CP000685	ABQ07204.1
Fjoh_2406	n.d.	Flavobacterium johnsoniae UW101	CP000685	ABQ05433.1
HCH_02844	n.d.	Hahella chejuensis KCTC 2396	CP000155	ABC29621.1
LSEI_2668	n.d.	Lactobacillus casei ATCC 334	CP000423	ABJ71387.1
LCABL_28580 (UgL)	n.d.	Lactobacillus casei BL23	FM177140.1	CAQ67908.1
LSA1785 (possible fragment)	n.d.	Lactobacillus sakei subsp. sakei 23K	CR936503	CAI56093.1
MAE_50580	n.d.	Microcystis aeruginosa NIES-843	AP009552	BAG04880.1
ORF	n.d.	Mycoplasma alligatoris A21JP2	AY515697	AAR98794.1
NE2344	n.d.	Nitrosomonas europaea ATCC 19718	BX321864 NC_004757	CAD86256.1 NP_842341.1
Nmul_A0964	n.d.	Nitrosospira multiformis ATCC 25196	CP000103	ABB74267.1
Oter_2883	n.d.	Opitutus terrae PB90-1	CP001032	ACB76164.1
Oter_0316	n.d.	Opitutus terrae PB90-1	CP001032	ACB73606.1
d-4,5 unsaturated -glycuronidase	3.2.1.-	Pedobacter heparinus
Reut_C6429	n.d.	Ralstonia eutropha JMP134	CP000092	AAZ65730.1
RHE_PF00318	n.d.	Rhizobium etli CFN 42	CP000138	ABC94208.1
RHECIAT_PC0000516	n.d.	Rhizobium etli CIAT 652	CP001077.1	ACE94594.1
pRL120662	n.d.	Rhizobium leguminosarum bv. viciae 3841	AM236086	CAK12371.1
PDK3.027	n.d.	Rhodococcus sp. DK17	AY502076	AAR90168.1
RHA1_ro08156	n.d.	Rhodococcus sp. RHA1	CP000432	ABG99201.1
SACE_4128	n.d.	Saccharopolyspora erythraea NRRL 2338	AM420293	CAM03397.1
SG2119 (possible fragment)	n.d.	Sodalis glossinidius str. 'morsitans'	AP008232	BAE75394.1
Acid_2735	n.d.	Solibacter usitatus Ellin6076	CP000473	ABJ83723.1
Acid_1134	n.d.	Solibacter usitatus Ellin6076	CP000473	ABJ82128.1
SAG1901	n.d.	Streptococcus agalactiae 2603V/R	AE014277 NC_004116	AAN00763.1 NP_688890.1
Gbs1889	n.d.	Streptococcus agalactiae NEM316	AL766854 NC_004368	CAD47548.1 NP_736323.1
Sequence 4026 from patent US 7074914 (fragment)	n.d.	Streptococcus pneumoniae	- - - - - -	ABI03987.1 ABI09028.1 ABJ32544.1 ABJ50157.1 ABL17900.1 ACC15012.1
SPCG_0328	n.d.	Streptococcus pneumoniae CGSP14	CP001033.1	ACB89580.1
SPD_0294	n.d.	Streptococcus pneumoniae D39	CP000410	ABJ55382.1
SPG_0292	n.d.	Streptococcus pneumoniae G54	CP001015.1	ACF56786.1
SPH_0433	n.d.	Streptococcus pneumoniae Hungary19A-6	CP000936	ACA36615.1
spr0292 (Ugl)	n.d.	Streptococcus pneumoniae R6	AE008410 NC_003098	AAK99096.1 NP_357886.1	Q8DR77
SP0322	n.d.	Streptococcus pneumoniae TIGR4	NC_003028 AE007344	NP_344858.1 AAK74498.1	Q97SL0
SPy0632 (Ugl)	n.d.	Streptococcus pyogenes M1 GAS SF370	AE006517 NC_002737	AAK33600.1 NP_268879.1	Q9A0T3
MGAS10270_Spy0517	n.d.	Streptococcus pyogenes MGAS10270	CP000260	ABF33582.1
M6_Spy0543	n.d.	Streptococcus pyogenes MGAS10394	CP000003	AAT86678.1
MGAS10750_Spy0541	n.d.	Streptococcus pyogenes MGAS10750	CP000262	ABF37491.1
MGAS2096_Spy0534	n.d.	Streptococcus pyogenes MGAS2096	CP000261	ABF35586.1
SpyM3_0446 (Ugl)	n.d.	Streptococcus pyogenes MGAS315	AE014145 NC_004070	AAM79053.1 NP_664250.1	Q8K862
M5005_Spy_0522	n.d.	Streptococcus pyogenes MGAS5005	CP000017	AAZ51140.1
M28_Spy0501	n.d.	Streptococcus pyogenes MGAS6180	CP000056	AAX71615.1
spyM18_0697	n.d.	Streptococcus pyogenes MGAS8232	AE010002 NC_003485	AAL97368.1 NP_606869.1	Q8P1V2
MGAS9429_Spy0513	n.d.	Streptococcus pyogenes MGAS9429	CP000259	ABF31701.1
SpyM51341	n.d.	Streptococcus pyogenes str. Manfredo	AM295007	CAM30669.1
SSU05_1220	n.d.	Streptococcus suis 05ZYH33	CP000407	ABP90186.1
SSU98_1235	n.d.	Streptococcus suis 98HAH33	CP000408	ABP92393.1
SAV44	n.d.	Streptomyces avermitilis MA-4680	AP005021 NC_003155	BAC67753.1 NP_821218.1
VV21092	n.d.	Vibrio vulnificus CMCP6	AE016811 NC_004460	AAO07998.1 NP_763008.1
VVA1615	n.d.	Vibrio vulnificus YJ016	AP005351 NC_005140	BAC97641.1 NP_937671.1	Q7MBX2


Eukaryota
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
Dig1	n.d.	Agaricus bisporus Horst U3	AJ271692	CAB71006.1	Q9P8B4
AN8425.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000153	EAA67047.1
AN3991.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000065	EAA59462.1
An01g01340	n.d.	Aspergillus niger CBS 513.88	AM269954	CAK43506.1
AO090138000087	n.d.	Aspergillus oryzae RIB 40	AP007170	BAE64465.1
AO090005000324	n.d.	Aspergillus oryzae RIB 40	AP007151	BAE55401.1
AO090701000907 (fragment)	n.d.	Aspergillus oryzae RIB 40	AP007164	BAE62552.1
DEHA0D00803g	n.d.	Debaryomyces hansenii CBS767	CR382136	CAG86594.1
DEHA0C18964g	n.d.	Debaryomyces hansenii CBS767	CR382135	CAG86543.1
DEHA0E01023g	n.d.	Debaryomyces hansenii CBS767	CR382137	CAG87553.1
DEHA0C19074g	n.d.	Debaryomyces hansenii CBS767	CR382135	CAG86548.1
MG05614.4	n.d.	Magnaporthe grisea 70-15	AACU01000549 XM_360240	EAA54823.1 XP_360240.1