CAZy Family GH78

CAZy ~ Carbohydrate-Active enZymes

Families

Glycoside Hydrolases

GlycosylTransferases

Polysaccharide Lyases

Carbohydrate Esterases

Carbohydrate-Binding Modules


Glycoside Hydrolase Family 78


Known Activities	-L-rhamnosidase (EC 3.2.1.40)

Mechanism	Inverting

Catalytic Nucleophile/Base	Not known

Catalytic Proton Donor	Not known

3D Structure Status	Fold: ( / ) ₆

Clan	none

Relevant Links	InterPro PFAM

Statistics	CAZy Entries (110); GenBank/GenPept (125); Swissprot (6); 3D(2) : PDB(3);

Taxonomy	Archaea(1); Bacteria(74); Eukaryota(34); unclassified(1);

3D Display	GH78_3D


Archaea
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
Cmaq_0172	n.d.	Caldivirga maquilingensis IC-167	CP000852	ABW01021.1


Bacteria
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
Arth_1838	n.d.	Arthrobacter sp. FB24	CP000454	ABK03228.1
Arth_1840	n.d.	Arthrobacter sp. FB24	CP000454	ABK03230.1
Arth_1969	n.d.	Arthrobacter sp. FB24	CP000454	ABK03351.1
BCE2265	n.d.	Bacillus cereus ATCC 10987	AE017271 NC_003909	AAS41184.1 NP_978576.1
BTZK2019 (RamA)	n.d.	Bacillus cereus ZK	CP000001	AAU18237.1
-L-rhamnosidase B (RhaB)	3.2.1.40	Bacillus sp. GL1	AB046706	BAB62315.1	Q93RE7	2OKX 2OLF	[A]
-L-rhamnosidase A (RhaA)	n.d.	Bacillus sp. GL1	AB046705	BAB62314.1	Q93RE8
BT9727_2019 (RamA)	n.d.	Bacillus thuringiensis serovar konkukian str. 97-27	AE017355	AAT59763.1
BALH_1999	n.d.	Bacillus thuringiensis str. Al Hakam	CP000485	ABK85311.1
BF0546	n.d.	Bacteroides fragilis NCTC 9343 ATCC 25285 = NCTC 9343	CR626927	CAH06301.1
BF0318	n.d.	Bacteroides fragilis NCTC 9343 ATCC 25285 = NCTC 9343	CR626927	CAH06089.1
BF0371	n.d.	Bacteroides fragilis YCH46	AP006841	BAD47120.1
BF0596	n.d.	Bacteroides fragilis YCH46	AP006841	BAD47345.1
BT2524	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016936 NC_004663	AAO77631.1 NP_811437.1
BT2523	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016936 NC_004663	AAO77630.1 NP_811436.1
BT4076	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016943 NC_004663	AAO79181.1 NP_812987.1
BT1019	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016930 NC_004663	AAO76126.1 NP_809932.1
BT1001	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016930 NC_004663	AAO76108.1 NP_809914.1		3CIH	[A]
BT1013	n.d.	Bacteroides thetaiotaomicron VPI-5482	AE016930 NC_004663	AAO76120.1 NP_809926.1
BVU_2731	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR40381.1
BVU_2645	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR40297.1
BVU_0174	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR37902.1
BVU_2648	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR40300.1
BVU_1787	n.d.	Bacteroides vulgatus ATCC 8482	CP000139	ABR39463.1
BamMC406_1216	n.d.	Burkholderia ambifaria MC40-6	CP001025	ACB63707.1
Bcen2424_0168	n.d.	Burkholderia cenocepacia HI2424	CP000458	ABK06922.1
Csac_1105 + Csac_1107	n.d.	Caldicellulosiruptor saccharolyticus DSM 8903	CP000679 CP000679	ABP66717.1 ABP66719.1
CC0978	n.d.	Caulobacter crescentus CB15	AE005775 NC_002696	AAK22962.1 NP_419794.1	Q9A9K2
Caur_3572	n.d.	Chloroflexus aurantiacus J-10-fl	CP000909	ABY36756.1
Caur_0361	n.d.	Chloroflexus aurantiacus J-10-fl	CP000909	ABY33611.1
CMM_0105	n.d.	Clavibacter michiganensis subsp. michiganensis NCPPB 382	AM711867	CAN00125.1
-L-rhamnosidase RamA	3.2.1.40	Clostridium stercorarium	AJ238748	CAB53341.1	Q9S3L0
Dgeo_2783	n.d.	Deinococcus geothermalis DSM 11300	CP000358	ABF44215.1
Sequence 5806 from patent US 6583275	n.d.	Enterococcus faecium	-	AAQ45248.1
Fjoh_4105	n.d.	Flavobacterium johnsoniae UW101	CP000685	ABQ07113.1
Fjoh_4080	n.d.	Flavobacterium johnsoniae UW101	CP000685	ABQ07088.1
Fjoh_4085	n.d.	Flavobacterium johnsoniae UW101	CP000685	ABQ07093.1
Franean1_4669	n.d.	Frankia sp. EAN1pec	CP000820	ABW14036.1
Franean1_0430	n.d.	Frankia sp. EAN1pec	CP000820	ABW09895.1
Krad_0118	n.d.	Kineococcus radiotolerans SRS30216	CP000750	ABS01609.1
Krad_0119	n.d.	Kineococcus radiotolerans SRS30216	CP000750	ABS01610.1
Krad_2533	n.d.	Kineococcus radiotolerans SRS30216	CP000750	ABS04008.1
Sequence 9716 from patent US 6610836	n.d.	Klebsiella pneumoniae	-	AAR49999.1
KPN_01890	n.d.	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ATCC 700721	CP000647	ABR77321.1
LBA1473	n.d.	Lactobacillus acidophilus NCFM	CP000033	AAV43293.1
lp_3471 (Ram1)	n.d.	Lactobacillus plantarum WCFS1	AL935262	CAD65558.1
nfa34020	n.d.	Nocardia farcinica IFM 10152	AP006618	BAD58249.1
Oter_3716	n.d.	Opitutus terrae PB90-1	CP001032	ACB76991.1
Oter_2903	n.d.	Opitutus terrae PB90-1	CP001032	ACB76184.1
Oter_3063	n.d.	Opitutus terrae PB90-1	CP001032	ACB76343.1
BDI_2414	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR44139.1
BDI_1649	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR43401.1
BDI_3139	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR44845.1
BDI_1318	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR43078.1
BDI_1796	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR43536.1
BDI_1319	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR43079.1
BDI_1317	n.d.	Parabacteroides distasonis ATCC 8503	CP000140	ABR43077.1
RHE_PC00040	n.d.	Rhizobium etli CFN 42	CP000136	ABC93247.1
pRL100260	n.d.	Rhizobium leguminosarum bv. viciae 3841	AM236084	CAK10486.1
RHA1_ro03902	n.d.	Rhodococcus sp. RHA1	CP000431	ABG95702.1
RB700 (RamA)	n.d.	Rhodopirellula baltica SH 1	BX294134 NC_005027	CAD71707.1 NP_864033.1
RB736	n.d.	Rhodopirellula baltica SH 1	BX294134 NC_005027	CAD71725.1 NP_864051.1
Rcas_0921	n.d.	Roseiflexus castenholzii DSM 13941	CP000804	ABU57036.1
Rcas_1874	n.d.	Roseiflexus castenholzii DSM 13941	CP000804	ABU57965.1
RoseRS_2735	n.d.	Roseiflexus sp. RS-1	CP000686	ABQ91107.1
Acid_3742	n.d.	Solibacter usitatus Ellin6076	CP000473	ABJ84713.1
Acid_5559	n.d.	Solibacter usitatus Ellin6076	CP000473	ABJ86506.1
SAML0993	n.d.	Streptomyces ambofaciens ATCC 23877	AM238663	CAJ89979.1
SAV828	n.d.	Streptomyces avermitilis MA-4680	AP005024 NC_003155	BAC68538.1 NP_822003.1
SCO0369 or SCF41.28c	n.d.	Streptomyces coelicolor A3(2)	AL117387 NC_003888	CAB55731.1 NP_624692.1	Q9RJU1
SCO0488 or SCF34.07	n.d.	Streptomyces coelicolor A3(2)	AL109974 NC_003888	CAB53318.1 NP_624805.1	Q9RK18
-L-rhamnosidase B (RhmB)	3.2.1.40	Thermomicrobia bacterium PRI-1686	AY505014	AAR96047.1
-L-rhamnosidase A (RhmA)	3.2.1.40	Thermomicrobia bacterium PRI-1686	AY505013	AAR96046.1
Tpet_1682	n.d.	Thermotoga petrophila RKU-1	CP000702	ABQ47687.1


Eukaryota
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
-L-rhamnosidase B (RhaB)	3.2.1.40	Aspergillus aculeatus NW240	AF284762	AAG13964.1
-L-rhamnosidase A (RhaA)	3.2.1.40	Aspergillus aculeatus NW240	AF284761	AAK16249.1
-L-rhamnosidase (AkRhm78) - Rhm78	3.2.1.40	Aspergillus kawachii NBRC 4308	AB374267	BAF98236.1
AN3780.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000061	EAA59988.1
AN5306.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000093	EAA62466.1
AN6925.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000115	EAA57680.1
AN0711.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000011	EAA65188.1
AN7151.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000122	EAA61403.1
AN2631.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000045	EAA62978.1
-L-rhamnosidase (AN10277.3)	3.2.1.40	Aspergillus nidulans FGSC A4	DQ490476	ABF50852.1
AN8465.2	n.d.	Aspergillus nidulans FGSC A4	AACD01000153	EAA67087.1
An07g00240	n.d.	Aspergillus niger CBS 513.88	AM270119	CAK39248.1
An15g04530 (fragment)	n.d.	Aspergillus niger CBS 513.88	AM270343	CAK97320.1
An18g04800	n.d.	Aspergillus niger CBS 513.88	AM270408	CAK43282.1
An12g05700	n.d.	Aspergillus niger CBS 513.88	AM270272	CAK46278.1
An01g06620	n.d.	Aspergillus niger CBS 513.88	AM269971	CAK43781.1
An08g09140	n.d.	Aspergillus niger CBS 513.88	AM270178	CAK96693.1
An04g09070	n.d.	Aspergillus niger CBS 513.88	AM270093	CAK38995.1
An10g00290	n.d.	Aspergillus niger CBS 513.88	AM270213	CAK49119.1
AO090001000105	n.d.	Aspergillus oryzae RIB 40	AP007154	BAE56658.1
AO090003001016	n.d.	Aspergillus oryzae RIB 40	AP007155	BAE58123.1
AO090103000432 (fragment)	n.d.	Aspergillus oryzae RIB 40	AP007174	BAE65861.1
AO090012000058	n.d.	Aspergillus oryzae RIB 40	AP007161	BAE60295.1
AO090010000561	n.d.	Aspergillus oryzae RIB 40	AP007175	BAE66403.1
AO090009000471	n.d.	Aspergillus oryzae RIB 40	AP007150	BAE54925.1
AO090003001291	n.d.	Aspergillus oryzae RIB 40	AP007155	BAE58354.1
AO090113000149 + AO090113000150 (fragments)	n.d.	Aspergillus oryzae RIB 40	AP007166 AP007166	BAE63198.1 BAE63199.1
CNB05740	n.d.	Cryptococcus neoformans var. neoformans JEC21	AE017342	AAW42008.1
CNG00310	n.d.	Cryptococcus neoformans var. neoformans JEC21	AE017347	AAW44459.1
DEHA0E01276g	n.d.	Debaryomyces hansenii CBS767	CR382137	CAG87565.1
MG02192.4	n.d.	Magnaporthe grisea 70-15	XM_365490	XP_365490.1
-L-rhamnosidase-like (182J17)	n.d.	Philodina roseola	EU643490	ACD54790.1
Pa_2_3190	n.d.	Podospora anserina	CU640366	CAP72888.1
YALI0D19602g	n.d.	Yarrowia lipolytica CLIB99	CR382130	CAG81231.1


unclassified
Protein	EC#	Organism	GenBank/GenPept		UniProt	PDB/3D
R.34-4 (fragment)	n.d.	unidentified microorganism	AM050329	CAJ19119.1