CAZy ~ Carbohydrate-Active enZymes


   
Glycoside Hydrolase Family 53
  
Known Activitiesendo-1,4--galactanase (EC 3.2.1.89).
 
MechanismRetaining
 
Catalytic Nucleophile/BaseGlu (experimental)
 
Catalytic Proton DonorGlu (experimental)
 
3D Structure StatusFold: ( / ) 8
 
ClanGH-A
 
StatisticsCAZy Entries (87);  GenBank/GenPept (115);  Uniprot (14);  3D(4) : PDB(11);
 
TaxonomyBacteria(74);  Eukaryota(13);  
 
3D DisplayGH53_3D
 
        
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
ASA_2387 n.d.Aeromonas salmonicida subsp. salmonicida A449CP000644
ABO90433.1
   
ASA_2379 n.d.Aeromonas salmonicida subsp. salmonicida A449CP000644
ABO90427.1
   
ASA_2386 n.d.Aeromonas salmonicida subsp. salmonicida A449CP000644
ABO90432.1
   
galactanase (fragment) n.d.Bacillus agaradhaerens AC13 (DSM 8721)
AAO31372.1
   
RBAM_012120 n.d.Bacillus amyloliquefaciens FZB42CP000560
ABS73575.1
   
ORF1 n.d.Bacillus circulans G1L03425
AAO31371
AAA22259.1
AAO31371.1
P48843
  
ABC3517 n.d.Bacillus clausii KSM-K16AP006627
BAD66050.1
   
BH2023 n.d.Bacillus halodurans C-125NC_002570
AP001514
NP_242889.1
BAB05742.1
Q9KBA5
  
endo--1,4-galactanase (YvfO;BL00263;BLi04276) 3.2.1.89
Bacillus licheniformis DSM 13 ATCC 14580-
CP000002
AE017333
AAO31370.1
AAU25711.1
AAU43089.1
 1R8L
1UR0
1UR4
2CCR
2GFT
2J74
[A]
[A]
[A]
[A]
[A]
[B]
unnamed protein product n.d.Bacillus plakortiensisCS546202
CAN36315.1
   
BPUM_3616 n.d.Bacillus pumilus SAFR-032CP000813
ABV64260.1
   
galactanase (GalA;YvfO;BSU34120) 3.2.1.89
Bacillus subtilis subsp. subtilis str. 168-
Z94043
Z99121
NC_000964
AAO31373.1
CAB08009.1
CAB15417.2
NP_391292.1
O07013
O32260
  
BT4668 n.d.Bacteroides thetaiotaomicron VPI-5482AE016946
NC_004663
AAO79773.1
NP_813579.1
   
BLD_1003 n.d.Bifidobacterium longum DJO10ACP000605.1
ACD98449.1
   
endogalactanase (BL0257;YvfO) 3.2.1.89
Bifidobacterium longum NCC2705AE014643
NC_004307
AAN24099.1
NP_695463.1
   
BamMC406_6029 n.d.Burkholderia ambifaria MC40-6CP001027
ACB68465.1
   
Bcen_4875 n.d.Burkholderia cenocepacia AU 1054CP000379
ABF79752.1
   
Bcen2424_3290 n.d.Burkholderia cenocepacia HI2424CP000459
ABK10034.1
   
Bamb_6329 n.d.Burkholderia cepacia AMMDCP000442
ABI91873.1
   
Caul_4081 (fragment) n.d.Caulobacter sp. K31CP000927
ABZ73205.1
   
endo--1,4-galactanase (GalA;GanA) 3.2.1.89
Cellvibrio japonicus (formerly Pseudomonas cellulosa)X91885
CAA62990.1
P48841
  
CJA_0492 - Gal53Bn.d.Cellvibrio japonicus Ueda107CP000934
ACE86078.1
   
CJA_0497 (endo--1,4-galactanase) - Gal53A-23.2.1.89
Cellvibrio japonicus Ueda107CP000934.1
ACE83887.1
   
CJA_0491 - gal53A-1n.d.Cellvibrio japonicus Ueda107CP000934
ACE85511.1
   
CAC2570 n.d.Clostridium acetobutylicum ATCC 824AE007755
NC_003030
AAK80519.1
NP_349179.1
Q97G04
  
Cphy_3586 n.d.Clostridium phytofermentans ISDgCP000885
ABX43935.1
   
Cthe_1400 n.d.Clostridium thermocellum ATCC 27405CP000568
ABN52631.1
   
ESA_03418 n.d.Enterobacter sakazakii ATCC BAA-894CP000783
ABU78636.1
   
Sequence 4865 from patent US 6583275 n.d.Enterococcus faecium-
AAQ44307.1
   
ECA3178 n.d.Erwinia carotovora subsp. atroseptica SCRI1043BX950851
CAG76076.1
   
ECA0852 n.d.Erwinia carotovora subsp. atroseptica SCRI1043BX950851
CAG73765.1
   
endo--1,4-galactanase (GanA;ABF-0018196) 3.2.1.89
Erwinia chrysanthemi str. 3937     
Franean1_2256 n.d.Frankia sp. EAN1pecCP000820
ABW11691.1
   
orf33 n.d.Gramella forsetii KT0803CU207366
CAL65023.1
   
Sequence 13552 from patent US 6610836 n.d.Klebsiella pneumoniae-
AAR53835.1
   
KPN_00430 n.d.Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ATCC 700721CP000647
ABR75882.1
   
LAR_1264 n.d.Lactobacillus reuteri F275CP000705
AP007281
ABQ83591.1
BAG25780.1
   
LEUM_1066 n.d.Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293CP000414
ABJ62166.1
   
MYPE6320 n.d.Mycoplasma penetrans HF-2AP004172
NC_004432
BAC44423.1
NP_758019.1
Q8EVD3
  
Oter_1159 n.d.Opitutus terrae PB90-1CP001032
ACB74447.1
   
Oter_2047 n.d.Opitutus terrae PB90-1CP001032
ACB75330.1
   
Sde_0683 - Arg53An.d.Saccharophagus degradans 2-40CP000282
ABD79945.1
   
Sde_2827 - Arg53Cn.d.Saccharophagus degradans 2-40CP000282
ABD82084.1
   
Sde_3710 - Arg53Bn.d.Saccharophagus degradans 2-40CP000282
ABD82965.1
   
sce6753 n.d.Sorangium cellulosum So ce56AM746676
CAN96922.1
   
SAV1324 n.d.Streptomyces avermitilis MA-4680AP005026
NC_003155
BAC69034.1
NP_822499.1
   
Tlet_0913 n.d.Thermotoga lettingae TMOCP000812
ABV33479.1
   
endo--1,4-galactanase (TM1201) 3.2.1.89
Thermotoga maritima MSB8AE001777
NC_000853
AAD36276.1
NP_229006.1
Q9X0S8
  
Tpet_1555 n.d.Thermotoga petrophila RKU-1CP000702
ABQ47562.1
   
TRQ2_1617 n.d.Thermotoga sp. RQ2CP000969
ACB09953.1
   
XAC0575 n.d.Xanthomonas axonopodis pv. citri str. 306AE011684
NC_003919
AAM35464.1
NP_640928.1
   
GalA n.d.Xanthomonas axonopodis pv. citri str. 306AE011762
NC_003919
AAM36180.1
NP_641644.1
   
xcc-b100_3046 (GalA2) n.d.Xanthomonas campestris pv. campestris B100AM920689
CAP52409.1
   
xcc-b100_0604 n.d.Xanthomonas campestris pv. campestris B100AM920689
CAP49939.1
   
XC_0587 n.d.Xanthomonas campestris pv. campestris str. 8004CP000050
AAY47668.1
   
XC_2984 n.d.Xanthomonas campestris pv. campestris str. 8004CP000050
AAY50032.1
   
GalA n.d.Xanthomonas campestris pv. campestris str. ATCC 33913AE012224
NC_003902
AAM40555.1
NP_636631.1
   
GalA n.d.Xanthomonas campestris pv. campestris str. ATCC 33913AE012483
NC_003902
AAM42894.1
NP_638970.1
   
XCV1360 n.d.Xanthomonas campestris pv. vesicatoria str. 85-10AM039952
CAJ22991.1
   
XCV0610 (GanA) n.d.Xanthomonas campestris pv. vesicatoria str. 85-10AM039952
CAJ22241.1
   
XOO4251 (fragment) n.d.Xanthomonas oryzae pv. oryzae KACC10331AE013598
AAW77505.1
   
XOO4012 (fragment) n.d.Xanthomonas oryzae pv. oryzae MAFF 311018AP008229
BAE70767.1
   
PXO_03928 (fragment) n.d.Xanthomonas oryzae pv. oryzae PXO99ACP000967
ACD57205.1
   
YpAngola_A3886 n.d.Yersinia pestis AngolaCP000901
ABX85109.1
   
YPA_0417 n.d.Yersinia pestis AntiquaCP000308
ABG12385.1
   
YP3550 n.d.Yersinia pestis biovar Medievalis str. 91001AE017140
NC_005810
AAS63702.1
NP_994825.1
   
YPO0853 n.d.Yersinia pestis CO92AJ414145
AL590842
NC_003143
CAC89700.1
CAL19523.1
NP_404474.1
Q8ZHN7
  
Y3238 n.d.Yersinia pestis KIMNC_004088
AE013925
NP_670537.1
AAM86788.1
   
YPN_3055 n.d.Yersinia pestis Nepal516CP000305
ABG19382.1
   
YPDSF_0660 n.d.Yersinia pestis Pestoides FCP000668
ABP39069.1
   
YpsIP31758_0917 n.d.Yersinia pseudotuberculosis IP 31758CP000720
ABS49427.1
   
YPTB3098 n.d.Yersinia pseudotuberculosis IP 32953BX936398
CAH22336.1
   
YPTS_3220 n.d.Yersinia pseudotuberculosis PB1/+CP001048.1
ACC90175.1
   
YPK_0972 n.d.Yersinia pseudotuberculosis YPIIICP000950
ACA67273.1
   
 
        
        Eukaryota          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
endo--1,4-galactanase 1 (Gal1) 3.2.1.89
Aspergillus aculeatusL34599
AAA32692.1
P48842
1FHL
1FOB
[A]
[A]
endo--1,4-galactanase (AN5727.2) 3.2.1.89
Aspergillus nidulans FGSC A4DQ490498
AACD01000098
ABF50874.1
EAA62820.1
   
An18g05940 3.2.1.89
Aspergillus niger CBS 513.88AM270410
CAK43317.1
   
An16g06590 n.d.Aspergillus niger CBS 513.88AM270372
CAK46993.1
   
endo--1,4-galactanase A (GalA) 3.2.1.89
Aspergillus niger CBS120.49AJ305303
CAC83735.1
Q8X168
  
AO090001000492 n.d.Aspergillus oryzae RIB 40AP007154
BAE57004.1
   
endo--1,4-galactanase (GalA) 3.2.1.89
Aspergillus tubingensisAJ012316
CAB40555.1
Q9Y7F8
  
endo--1,4-galactanase 3.2.1.89
Corynascus heterothallicus

AAE73520.1
AAN99814.1
P83692
1HJS
1HJU
[B]
[B]
endo--1,4-galactanase 3.2.1.89
Humicola insolens-
-
CQ826771
AAE73521.1
AAN99815.1
CAG44583.1
P83691
1HJQ
[A]
MG09726.4 n.d.Magnaporthe grisea 70-15AACU01001292
XM_364881
EAA49735.1
XP_364881.1
   
endo--1,4-galactanase 3.2.1.89
Meripilus giganteus-
AAQ77827.1
   
NCU00972.1 (B20J13.230) n.d.Neurospora crassa OR74ABX842629
AABX01000010
XM_325151
CAE76342.1
EAA35929.1
XP_325152.1
Q7SGF0
  
unnamed protein product n.d.Podospora anserinaCU633899
CAP67782.1
   
 


  Last update: 2008 Sep 26   © Copyright 1998-2008 AFMB - CNRS - Universités Aix-Marseille I & II