CAZy ~ Carbohydrate-Active enZymes


   
Glycoside Hydrolase Family 42
  
Known Activities-galactosidase (EC 3.2.1.23).
 
MechanismRetaining
 
Catalytic Nucleophile/BaseGlu (experimental)
 
Catalytic Proton DonorGlu (experimental)
 
3D Structure StatusFold: ( / ) 8
 
ClanGH-A
 
NoteIdentification of the catalytic residues in doi:10.1016/j.febslet.2007.04.053
 
Relevant LinksInterPro   PFAM   
 
StatisticsCAZy Entries (155);  GenBank/GenPept (188);  Uniprot (32);  3D(1) : PDB(2);
 
TaxonomyArchaea(2);  Bacteria(152);  Eukaryota(1);  
 
3D DisplayGH42_3D
 
        
        Archaea          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
Cmaq_0080 n.d.Caldivirga maquilingensis IC-167CP000852
ABW00934.1
   
-galactosidase (BgaH) 3.2.1.23
Haloferax alicanteiU70664
AAB40123.2
P94804
  
 
        
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
Acid345_0901 n.d.Acidobacteria bacterium Ellin345CP000360
ABF39904.1
   
tellurium-resistant protein (fragment) n.d.Acinetobacter lwoffiiEF468462
ABO64441.1
   
ASA_2378 n.d.Aeromonas salmonicida subsp. salmonicida A449CP000644
ABO90426.1
   
-galactosidase (GalB) 3.2.1.23
Alicyclobacillus acidocaldarius ATCC27009DQ092440
AAZ81841.1
   
-galactosidase 3.2.1.23
Alicyclobacillus acidocaldarius ATCC27009DQ887754
ABI84370.1
   
AAur_3310 n.d.Arthrobacter aurescens TC1CP000474
ABM06369.1
   
AAur_4082 n.d.Arthrobacter aurescens TC1CP000474
ABM08683.1
   
AAur_1127 n.d.Arthrobacter aurescens TC1CP000474
ABM10119.1
   
-galactosidase 3.2.1.23
Arthrobacter sp. B7U17417
AAA75601.1
Q44233
  
Arth_3325 n.d.Arthrobacter sp. FB24CP000454
ABK04700.1
   
-galactosidase (BgaA) n.d.Bacillus circulans G1L03424
AAA22258.1
Q45092
  
-galactosidase (BgaB) n.d.Bacillus circulans G1L03425
AAA22260.1
Q45093
  
ABC3516 n.d.Bacillus clausii KSM-K16AP006627
BAD66049.1
   
ABC1405 n.d.Bacillus clausii KSM-K16AP006627
BAD63941.1
   
LacA (BH2022) n.d.Bacillus halodurans C-125AP001514
NC_002570
BAB05741.1
NP_242888.1
Q9KBA6
  
BH3701 n.d.Bacillus halodurans C-125AP001519
NC_002570
BAB07420.1
NP_244568.1
Q9K6M7
  
LacBl (fragment) n.d.Bacillus licheniformisU89996
AAB49721.1
P97026
  
BLi04277 or BL00264 (LacA) n.d.Bacillus licheniformis DSM 13 ATCC 14580CP000002
AE017333
AAU25712.1
AAU43090.1
   
BLi00447 or BL01749 n.d.Bacillus licheniformis DSM 13 ATCC 14580CP000002
AE017333
AAU22047.1
AAU39403.1
   
BLi01382 / BL03780 (YesZ) n.d.Bacillus licheniformis DSM 13 ATCC 14580CP000002
AE017333
AAU22933.1
AAU40286.1
   
BPUM_3617 n.d.Bacillus pumilus SAFR-032CP000813
ABV64261.1
   
-galactosidase n.d.Bacillus subtilis G1EU585783.1
ACB72733.1
   
-galactosidase (YesZ;BSU07080) 3.2.1.23
Bacillus subtilis subsp. subtilis str. 168Z99107
NC_000964
CAB12527.1
NP_388589.1
O31529
  
-galactosidase (LacA;YvfN;BSU34130) 3.2.1.23
Bacillus subtilis subsp. subtilis str. 168Z94043
Z99121
NC_000964
CAB08008.1
CAB15418.1
NP_391293.1
O07012
  
BT4152 n.d.Bacteroides thetaiotaomicron VPI-5482AE016944
NC_004663
AAO79257.1
NP_813063.1
   
BVU_0179 n.d.Bacteroides vulgatus ATCC 8482CP000139
ABR37907.1
   
BAD_1603 n.d.Bifidobacterium adolescentis ATCC 15703AP009256
BAF40384.1
   
BAD_1211 n.d.Bifidobacterium adolescentis ATCC 15703AP009256
BAF39992.1
   
BAD_1401 n.d.Bifidobacterium adolescentis ATCC 15703AP009256
BAF40182.1
   
BAD_0435 (fragment) n.d.Bifidobacterium adolescentis ATCC 15703AP009256
BAF39216.1
   
-galactosidase (BgalII) 3.2.1.23
Bifidobacterium adolescentis DSM 20083AY359872
AAR24113.1
   
-galactosidase P2 (BbgII) 3.2.1.23
Bifidobacterium bifidum NCIMB 41171EF520729
ABP87597.1
   
-galactosidase (Bgal) n.d.Bifidobacterium breve ATCC 15698AY691690
AAU00556.1
   
-galactosidase (INF1) 3.2.1.23
Bifidobacterium infantisAJ224436
CAC14567.1
Q9F4C8
  
-galactosidase III 3.2.1.23
Bifidobacterium infantis HL96AF192266
AAL02053.1
Q93GI5
  
BLD_1005 (LacA2) n.d.Bifidobacterium longum DJO10ACP000605.1
ACD98451.1
   
BLD_0926 (LacA1) n.d.Bifidobacterium longum DJO10ACP000605.1
ACD98372.1
   
BL0259 (BgaB) n.d.Bifidobacterium longum NCC2705AE014644
NC_004307
AAN24101.1
NP_695465.1
   
BL1168 (BgA) n.d.Bifidobacterium longum NCC2705AE014741
NC_004307
AAN24973.1
NP_696337.1
Q8G552
  
BamMC406_6027 n.d.Burkholderia ambifaria MC40-6CP001027.1
ACB68463.1
   
BamMC406_5486 n.d.Burkholderia ambifaria MC40-6CP001026.1
ACB67930.1
   
Bcen_5202 n.d.Burkholderia cenocepacia AU 1054CP000379
ABF80076.1
   
Bcen_4877 n.d.Burkholderia cenocepacia AU 1054CP000379
ABF79754.1
   
Bcen2424_3288 n.d.Burkholderia cenocepacia HI2424CP000459
ABK10032.1
   
Bcen2424_5657 n.d.Burkholderia cenocepacia HI2424CP000459
ABK12390.1
   
Bamb_6327 n.d.Burkholderia cepacia AMMDCP000442
ABI91871.1
   
Bamb_4931 n.d.Burkholderia cepacia AMMDCP000441
ABI90480.1
   
Bmul_3197 n.d.Burkholderia multivorans ATCC 17616CP000869
AP009386.1
ABX16881.1
BAG47166.1
   
Bphy_2352 n.d.Burkholderia phymatum STM815CP001043.1
ACC71527.1
   
Bphyt_4585 n.d.Burkholderia phytofirmans PsJNCP001053
ACD18958.1
   
Bcep1808_3827 n.d.Burkholderia vietnamiensis G4CP000615
ABO56810.1
   
Csac_1018 n.d.Caldicellulosiruptor saccharolyticus DSM 8903CP000679
ABP66632.1
   
-galactosidase (BgaA) 3.2.1.23
Caldicellulosiruptor sp. 14BAJ131399
CAA10365.1
   
-galactosidase (BgaA) 3.2.1.23
Caldicellulosiruptor sp. YI5DQ142921
ABA18805.1
   
-galactosidase BgaB 3.2.1.23
Carnobacterium piscicola BAAF184246
AAF16519.1
Q9RFN0
  
CMS2571 n.d.Clavibacter michiganensis subsp. sepedonicus ATCC33113AM849034
CAQ02652.1
   
Cbei_1232 n.d.Clostridium beijerinckii NCIMB 8052CP000721
ABR33414.1
   
-galactosidase/-L-arabinopyranosidase (BgaA) 3.2.1.23

3.2.1.-
Clostridium cellulovoransAY128945
AAN05452.1
Q8GEE3
  
-galactosidase (Pbg) 3.2.1.23
Clostridium perfringensD49537
X97684
BAA08485.1
CAA66274.1
Q59312
Q46253
  
-galactosidase (Pbg;CPE0167) n.d.Clostridium perfringens 13AP003185
NC_003366
BAB79873.1
NP_561083.1
Q8XP01
  
CPF_0160 n.d.Clostridium perfringens ATCC 13124CP000246
ABG83924.1
   
CPR_0156 n.d.Clostridium perfringens SM101CP000312
ABG86644.1
   
Bgal (fragment) n.d.Clostridium septicum ATCC 12464AJ539085
CAD62164.1
Q84F08
  
Dgeo_2829 n.d.Deinococcus geothermalis DSM 11300CP000358
ABF44258.1
   
Dshi_1239 n.d.Dinoroseobacter shibae DFL 12CP000830
ABV92981.1
   
ESA_03417 n.d.Enterobacter sakazakii ATCC BAA-894CP000783
ABU78635.1
   
ECA3179 (Pbg) n.d.Erwinia carotovora subsp. atroseptica SCRI1043BX950851
CAG76077.1
   
-galactosidase (GanB;ABF-0018198) 3.2.1.23
Erwinia chrysanthemi str. 3937     
ELI_03710 n.d.Erythrobacter litoralis HTCC2594CP000157
ABC62834.1
   
Exig_0375 n.d.Exiguobacterium sibiricum 255-15CP001022
ACB59859.1
   
Exig_1655 n.d.Exiguobacterium sibiricum 255-15CP001022
ACB61110.1
   
Fnod_0419 n.d.Fervidobacterium nodosum Rt17-B1CP000771
ABS60284.1
   
Fphi_0309 n.d.Francisella philomiragia subsp. philomiragia ATCC 25017CP000937
ABZ86525.1
   
-galactosidase I (BgaB) 3.2.1.23
Geobacillus stearothermophilusM13466
AAA22262.1
P19668
  
-galactosidase (thermostable) 3.2.1.23
Geobacillus thermocatenulatus KNOUC105AY863103
AAW56416.1
   
Haur_3638 n.d.Herpetosiphon aurantiacus ATCC 23779CP000875
ABX06274.1
   
Jann_3830 n.d.Jannaschia sp. CCS1CP000264
ABD56747.1
   
Krad_0412 n.d.Kineococcus radiotolerans SRS30216CP000750
ABS01902.1
   
Krad_3970 n.d.Kineococcus radiotolerans SRS30216CP000750
ABS05433.1
   
Sequence 9046 from patent US 6610836 n.d.Klebsiella pneumoniae-
AAR49329.1
   
Sequence 13463 from patent US 6610836 n.d.Klebsiella pneumoniae-
AAR53746.1
   
KPN_04612 n.d.Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ATCC 700721CP000647
ABR79963.1
   
KPN_00431 n.d.Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ATCC 700721CP000647
ABR75883.1
   
-galactosidase (LacZ) 3.2.1.23
Lactobacillus acidophilus ATCC 4356EU590652
ACC38288.1
   
LBA1364 (LacA) n.d.Lactobacillus acidophilus NCFMCP000033
AAV43189.1
   
LBA1462 3.2.1.23
Lactobacillus acidophilus NCFMCP000033
CS582968
AAV43283.1
CAN87410.1
   
LAF_0780 n.d.Lactobacillus fermentum IFO 3956AP008937
BAG27116.1
   
lhv_1542 (LacA) (fragment) n.d.Lactobacillus helveticus DPC 4571AY616518
CP000517
AAU11511.1
ABX27481.1
   
LJ0738 n.d.Lactobacillus johnsonii NCC 533AE017202
NC_005362
AAS08556.1
NP_964590.1
   
LJ0858 n.d.Lactobacillus johnsonii NCC 533AE017202
NC_005362
AAS08679.1
NP_964713.1
   
LacA n.d.Lactobacillus plantarum WCFS1AL935262
NC_004567
CAD65556.1
NP_786678.1
   
Lreu_1085 n.d.Lactobacillus reuteri F275CP000705
AP007281.1
ABQ83342.1
BAG25548.1
   
LBF_0026 n.d.Leptospira biflexa Patoc 1 (Ames)CP000777
ABZ92573.1
   
LEPBI_I0024 n.d.Leptospira biflexa Patoc 1 (Paris)CP000786
ABZ96171.1
   
LIC10031 (LacZ) n.d.Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130AE017287
AAS68668.1
   
LA0035 n.d.Leptospira interrogans serovar lai str. 56601AE011195
NC_004342
AAN47234.1
NP_710216.1
   
Lcho_3245 n.d.Leptothrix cholodnii SP-6CP001013
ACB35503.1
   
LacZ (fragment) n.d.Leuconostoc lactisU47655
AAC44112.1
Q48623
  
LEUM_0845 n.d.Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293CP000414
ABJ61953.1
   
LEUM_1064 n.d.Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293CP000414
ABJ62164.1
   
Mmwyl1_2015 n.d.Marinomonas sp. MWYL1CP000749
ABR70937.1
   
OEOE_1831 n.d.Oenococcus oeni PSU-1CP000411
ABJ57666.1
   
Oter_2209 n.d.Opitutus terrae PB90-1CP001032
ACB75492.1
   
-galactosidase (BgaP1) n.d.Paenibacillus sp. K1EU728830
ACE62913.1
   
Plav_1938 n.d.Parvibaculum lavamentivorans DS-1CP000774
ABS63553.1
   
Pmob_0829 n.d.Petrotoga mobilis SJ95CP000879
ABX31553.1
   
-galactosidase (BgaP) 3.2.1.23
Planococcus sp. L4DQ899950
ABI64125.1
   
-galactosidase (BgaA) 3.2.1.23
Planococcus sp. SOS OrangeAF242542
AAF75984.1
Q9KI47
  
Patl_2144 n.d.Pseudoalteromonas atlantica T6cCP000388
ABG40662.1
   
RHE_CH02656 (probable fragment) n.d.Rhizobium etli CFN 42CP000133
ABC91427.1
   
RHECIAT_CH0002793 (probable fragment) n.d.Rhizobium etli CIAT 652CP001074
ACE91744.1
   
RL3801 n.d.Rhizobium leguminosarum bv. viciae 3841AM236080
CAK09291.1
   
RL3107 n.d.Rhizobium leguminosarum bv. viciae 3841AM236080
CAK08593.1
   
RD1_2869 n.d.Roseobacter denitrificans OCh 114CP000362
ABG32395.1
   
SACE_5154 n.d.Saccharopolyspora erythraea NRRL 2338AM420293
CAM04398.1
   
TM1040_3492 n.d.Silicibacter sp. TM1040CP000376
ABF62464.1