CAZy ~ Carbohydrate-Active enZymes


   
Glycoside Hydrolase Family 39
  
Known Activities-L-iduronidase (EC 3.2.1.76); -xylosidase (EC 3.2.1.37).
 
MechanismRetaining
 
Catalytic Nucleophile/BaseGlu (experimental)
 
Catalytic Proton DonorGlu (experimental)
 
3D Structure StatusFold: ( / ) 8
 
ClanGH-A
 
Relevant LinksInterPro   PFAM   PRINTS   PROSITE   
 
StatisticsCAZy Entries (130);  GenBank/GenPept (173);  Uniprot (17);  3D(3) : PDB(5); cryst(1);
 
TaxonomyArchaea(1);  Bacteria(119);  Eukaryota(10);  
 
3D DisplayGH39_3D
 
        
        Archaea          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
Mhun_0695 n.d.Methanospirillum hungatei JF-1CP000254
ABD40448.1
   
 
        
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
AM1_1890 (possible fragment) n.d.Acaryochloris marina MBIC11017CP000828
ABW26910.1
   
Acry_3134 n.d.Acidiphilium cryptum JF-5CP000689
ABQ28761.1
   
-1,4-xylosidase (XysA) 3.2.1.37
Aeromonas punctata ME-1AB042614
BAA95685.1
Q9LBF2
  
Clos_0056 n.d.Alkaliphilus oremlandii OhILAsCP000853
ABW17626.1
   
-xylosidase (XylBH39;BH1068) 3.2.1.37
Bacillus halodurans C-125AP001510
NC_002570
BAB04787.1
NP_241934.1
Q9KDZ3
  
Bind_2759 n.d.Beijerinckia indica subsp. indica ATCC 9039CP001016
ACB96331.1
   
Bll2378 n.d.Bradyrhizobium japonicum USDA110BA000040
BAC47643.1
   
BBta_1040 n.d.Bradyrhizobium sp. BTAi1CP000494
ABQ33295.1
   
BRADO7045 n.d.Bradyrhizobium sp. ORS278CU234118
CAL80629.1
   
Bcen_4164 n.d.Burkholderia cenocepacia AU 1054CP000379
ABF79053.1
   
Bcen2424_4202 n.d.Burkholderia cenocepacia HI2424CP000459
ABK10937.1
   
BMAA0086 n.d.Burkholderia mallei ATCC 23344CP000011
AAU46083.1
   
BMA1111 (possible fragment) n.d.Burkholderia mallei ATCC 23344CP000010
AAU49286.1
   
BMA10299_A0215 n.d.Burkholderia mallei NCTC 10229CP000546
ABN01279.1
   
BMA10299_1526 n.d.Burkholderia mallei NCTC 10229CP000545
ABN00455.1
   
BMA10247_A0102 n.d.Burkholderia mallei NCTC 10247CP000547
ABO02951.1
   
BMA10247_0947 n.d.Burkholderia mallei NCTC 10247CP000548
ABO06906.1
   
BMASAVP1_1246 n.d.Burkholderia mallei SAVP1CP000525
ABM49134.1
   
BMASAVP1_A1553 n.d.Burkholderia mallei SAVP1CP000526
ABM51302.1
   
Bphy_6730 n.d.Burkholderia phymatum STM815CP001045
ACC75753.1
   
Bphyt_0843 n.d.Burkholderia phytofirmans PsJNCP001052
ACD15265.1
   
BURPS1106A_1721 n.d.Burkholderia pseudomallei 1106aCP000572
ABN89017.1
   
BURPS1106A_A2688 n.d.Burkholderia pseudomallei 1106aCP000573
ABN94460.1
   
BURPS1710b_A1086 n.d.Burkholderia pseudomallei 1710bCP000125
ABA52499.1
   
BURPS1710b_1875 n.d.Burkholderia pseudomallei 1710bCP000124
ABA49656.1
   
BURPS668_1696 n.d.Burkholderia pseudomallei 668CP000570
ABN83662.1
   
BURPS668_A2839 n.d.Burkholderia pseudomallei 668CP000571
ABN88325.1
   
BPSL1957 n.d.Burkholderia pseudomallei K96243BX571965
CAH35956.1
   
BPSS1977 n.d.Burkholderia pseudomallei K96243BX571966
CAH39455.1
   
BTH_I2610 n.d.Burkholderia thailandensis E264; ATCC 700388CP000086
ABC36928.1
   
BTH_II0395 n.d.Burkholderia thailandensis E264; ATCC 700388CP000085
ABC35441.1
   
Bxe_A3853 n.d.Burkholderia xenovorans LB400CP000270
ABE29145.1
   
-xylosidase D (XynD) 3.2.1.37
Caldicellulosiruptor saccharolyticusAF005383
AAB87373.1
O30428
  
-xylosidase B (XynB) 3.2.1.37
Caldicellulosiruptor saccharolyticusM34459
AF005383
AAA23063.1
AAB87376.1
P23552
  
Csac_2409 n.d.Caldicellulosiruptor saccharolyticus DSM 8903CP000679
ABP67986.1
   
Csac_2404 n.d.Caldicellulosiruptor saccharolyticus DSM 8903CP000679
ABP67981.1
   
kustc0420 n.d.Candidatus Kuenenia stuttgartiensisCT573073
CAJ71165.1
   
CC2357 n.d.Caulobacter crescentus CB15AE005905
NC_002696
AAK24328.1
NP_421160.1
Q9A5U0
  
Caul_3132 n.d.Caulobacter sp. K31CP000927
ABZ72259.1
   
CJA_3008 - Xyl39An.d.Cellvibrio japonicus Ueda107CP000934
ACE85049.1
   
Caur_3072 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY36271.1
   
Caur_2353 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY35562.1
   
Caur_1679 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY34897.1
   
Caur_3540 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY36724.1
   
Caur_2461 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY35669.1
   
Caur_1680 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY34898.1
   
Caur_0949 n.d.Chloroflexus aurantiacus J-10-flCP000909
ABY34181.1
   
CAP0117 n.d.Clostridium acetobutylicum ATCC 824NC_001988
AE001438
NP_149280.1
AAK76862.1
Q97TI4
  
Cbei_3047 n.d.Clostridium beijerinckii NCIMB 8052CP000721
ABR35186.1
   
CLL_A0691 n.d.Clostridium botulinum B str. Eklund 17BCP001056
ACD24850.1
   
-xylosidase A (BxlA) - Bxl39A3.2.1.37
Clostridium stercorarium NCIMB 11745AJ508404
CAD48308.1
Q8GJ43
  
Cthe_2137 n.d.Clostridium thermocellum ATCC 27405CP000568
ABN53341.1
   
Glyco_10 n.d.Corynebacterium glutamicum RAB185495
BAD83880.1
   
Fjoh_0776 n.d.Flavobacterium johnsoniae UW101CP000685
ABQ03810.1
   
-xylosidase (XynB;XynB1) 3.2.1.37
Geobacillus stearothermophilus T-6; NCIMB 40222AF098273
DQ868502
AAC98129.1
ABI49941.1
Q9ZFM2
1W91
2BFG
2BS9
[A]
[A]
[A]
GTNG_1769 n.d.Geobacillus thermodenitrificans NG80-2CP000557
ABO67133.1
   
Haur_3384 n.d.Herpetosiphon aurantiacus ATCC 23779CP000875
ABX06020.1
   
Haur_0356 n.d.Herpetosiphon aurantiacus ATCC 23779CP000875
ABX03007.1
   
Haur_4299 n.d.Herpetosiphon aurantiacus ATCC 23779CP000875
ABX06931.1
   
Haur_3383 n.d.Herpetosiphon aurantiacus ATCC 23779CP000875
ABX06019.1
   
Haur_0064 n.d.Herpetosiphon aurantiacus ATCC 23779CP000875
ABX02716.1
   
Krad_1063 n.d.Kineococcus radiotolerans SRS30216CP000750
ABS02551.1
   
Sequence 8357 from patent US 6610836 n.d.Klebsiella pneumoniae-
AAR48640.1
   
Minf_1351 n.d.Methylokorus infernorum V4CP000975
ACD83405.1
   
Oter_1362 n.d.Opitutus terrae PB90-1CP001032
ACB74647.1
   
plu3935 n.d.Photorhabdus luminescens subsp. laumondii TTO1BX571872
NC_005126
CAE16307.1
NP_931135.1
   
plu3934 n.d.Photorhabdus luminescens subsp. laumondii TTO1BX571872
NC_005126
CAE16306.1
NP_931134.1
   
PSPA7_3004 n.d.Pseudomonas aeruginosa PA7CP000744
ABR81595.1
   
PA2237 n.d.Pseudomonas aeruginosa PAO1AE004649
NC_002516
AAG05625.1
NP_250927.1
Q9I1N2
  
PA14_35670 n.d.Pseudomonas aeruginosa UCBPP-PA14CP000438
ABJ11420.1
   
PFL_4213 n.d.Pseudomonas fluorescens Pf-5CP000076
AAY93469.1
   
Pmen_3268 n.d.Pseudomonas mendocina ympCP000680
ABP86021.1
   
Pmen_4282 n.d.Pseudomonas mendocina ympCP000680
ABP87029.1
   
PST_1754 n.d.Pseudomonas stutzeri A1501CP000304
ABP79432.1
   
PSPPH_3227 n.d.Pseudomonas syringae pv. phaseolicola 1448A; BAA-978CP000058
AAZ33385.1
   
Psyr_3306 n.d.Pseudomonas syringae pv. syringae B728aCP000075
AAY38338.1
   
PSPTO5546 n.d.Pseudomonas syringae pv. tomato str. DC3000AE016876
NC_004578
AAO58965.1
NP_795270.1
   
PSPTO3534 n.d.Pseudomonas syringae pv. tomato str. DC3000AE016868
NC_004578
AAO57009.1
NP_793314.1
   
pRL100282 n.d.Rhizobium leguminosarum bv. viciae 3841AM236084
CAK10507.1
   
RL4418 n.d.Rhizobium leguminosarum bv. viciae 3841AM236080
CAK09904.1
   
RPA3342 n.d.Rhodopseudomonas palustris CGA009BX572603
NC_005296
CAE28783.1
NP_948681.1
   
Rpal_3764 n.d.Rhodopseudomonas palustris TIE-1CP001096
ACF02263.1
   
Rcas_2723 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU58794.1
   
Rcas_3670 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59719.1
   
Rcas_3535 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59584.1
   
Rcas_3344 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59394.1
   
Rcas_3039 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59093.1
   
Rcas_3882 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59918.1
   
Rcas_0331 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU56463.1
   
Rcas_3536 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59585.1
   
Rcas_3520 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59570.1
   
Rcas_3314 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59365.1
   
Rcas_3938 n.d.Roseiflexus castenholzii DSM 13941CP000804
ABU59971.1
   
RoseRS_0857 n.d.Roseiflexus sp. RS-1CP000686
ABQ89270.1
   
RoseRS_3991 n.d.Roseiflexus sp. RS-1CP000686
ABQ92338.1
   
RoseRS_3713 n.d.Roseiflexus sp. RS-1CP000686
ABQ92067.1
   
RoseRS_2654 n.d.Roseiflexus sp. RS-1CP000686
ABQ91028.1
   
RoseRS_2152 n.d.Roseiflexus sp. RS-1CP000686
ABQ90532.1
   
RoseRS_4040 n.d.Roseiflexus sp. RS-1CP000686
ABQ92384.1
   
RoseRS_0740 n.d.Roseiflexus sp. RS-1CP000686
ABQ89156.1
   
RoseRS_3885 n.d.Roseiflexus sp. RS-1CP000686
ABQ92238.1
   
RoseRS_3712 n.d.Roseiflexus sp. RS-1CP000686
ABQ92066.1
   
RoseRS_2630 n.d.Roseiflexus sp. RS-1CP000686
ABQ91004.1
   
RoseRS_1096 n.d.Roseiflexus sp. RS-1CP000686
ABQ89504.1
   
Spro_1593 n.d.Serratia proteamaculans 568CP000826
ABV40697.1
   
Acid_3646 n.d.Solibacter usitatus Ellin6076CP000473
ABJ84618.1
   
SAV6569 (XynB3) n.d.Streptomyces avermitilis MA-4680AP005047
NC_003155
BAC74280.1
NP_827745.1
   
SAV1453 n.d.Streptomyces avermitilis MA-4680AP005026
NC_003155
BAC69163.1
NP_822628.1
   
-xylosidase (XynB) 3.2.1.37
Thermoanaerobacterium saccharolyticumM97883
AAA27369.1
P36906
1PX8
1UHV
[B]
[D]
-xylosidase (XylB) 3.2.1.37
Thermoanaerobacterium sp. JW/SL YS485AF001926
AAB68820.1
O30360
  
Tpet_0632 n.d.Thermotoga petrophila RKU-1CP000702
ABQ46652.1
   
TRQ2_0657 n.d.Thermotoga sp. RQ2CP000969
AJ440740
ACB09010.1
CAD29679.1
   
Xaut_4673 n.d.Xanthobacter autotrophicus Py2CP000781
ABS69893.1
   
Xaut_3558 n.d.Xanthobacter autotrophicus Py2CP000781
ABS68786.1
   
Xaut_3568 n.d.Xanthobacter autotrophicus Py2CP000781
ABS68796.1
   
XynB n.d.Xanthomonas axonopodis pv. citri str. 306AE012054
NC_003919
AAM38893.1
NP_644357.1
   
xcc-b100_4166 n.d.Xanthomonas campestris pv. campestris B100AM920689
CAP53535.1
   
XC_4065 n.d.Xanthomonas campestris pv. campestris str. 8004CP000050
AAY51104.1
   
XynB n.d.Xanthomonas campestris pv. campestris str. ATCC 33913AE012518
NC_003902
AAM43196.1
NP_639314.1
   
 
        
        Eukaryota          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
AN7117.2 n.d.Aspergillus nidulans FGSC A4AACD01000119
EAA61322.1
   
IduA (fragment) n.d.Balaenoptera musculusAY911304
AAX07735.1
   
-L-iduronidase (IduA)