CAZy ~ Carbohydrate-Active enZymes


   
Glycoside Hydrolase Family 108
  
Known ActivitiesN-acetylmuramidase (EC 3.2.1.17)
 
MechanismNot known
 
Catalytic Nucleophile/BaseNot known
 
Catalytic Proton DonorGlu
 
NoteCreated after Emina A. Stojkoviae and Lucia B. Rothman-Denes (2007) J. Mol. Biol. 366:406-419. PMID:17174325
 
StatisticsCAZy Entries (132);  GenBank/GenPept (134);  Uniprot (0);  3D(2) : PDB(3);
 
TaxonomyBacteria(126);  Viruses(6);  
 
3D DisplayGH108_3D
 
       
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
ABAYE2537  

Acinetobacter baumannii CAM87378.1
   
ABAYE1274  

Acinetobacter baumannii CAM86195.1
   
ABSDF1449  

Acinetobacter baumannii CAP00795.1
   
ABAYE2689  

Acinetobacter baumannii CAM87520.1
   
ABAYE2499 (probable fragment)  

Acinetobacter baumannii CAM87341.1
   
ABSDF2454  

Acinetobacter baumannii CAP01764.1
   
ABSDF1053  

Acinetobacter baumannii CAP00405.1
   
ABBFA_002348  

Acinetobacter baumannii AB307-0294 ACJ57450.1
   
ABBFA_002315 (probable fragment)  

Acinetobacter baumannii AB307-0294 ACJ56406.1
   
ABBFA_002523  

Acinetobacter baumannii AB307-0294 ACJ58761.1
   
AB57_3191  

Acinetobacter baumannii AB0057 ACJ41774.1
   
AB57_1402 (fragment)  

Acinetobacter baumannii AB0057 ACJ40422.1
   
AB57_1365 (frameshift)  

Acinetobacter baumannii AB0057 ACJ40385.1
   
AB57_1401 (fragment)  

Acinetobacter baumannii AB0057 ACJ40421.1
   
ACICU_02712  

Acinetobacter baumannii ACICU ACC58024.1
   
ACICU_01068  

Acinetobacter baumannii ACICU ACC56380.1
   
ACICU_01208  

Acinetobacter baumannii ACICU ACC56520.1
   
A1S_1226 (fragment)  

Acinetobacter baumannii ATCC 17978 ABO11655.1
   
A1S_1171  

Acinetobacter baumannii ATCC 17978 ABO11601.1
ABO11601.2
   
Bind_3374  

Beijerinckia indica subsp. indica ATCC 9039 ACB96931.1
   
BBta_3868  

Bradyrhizobium sp. BTAi1 ABQ35943.1
   
BruAb1_0868  

Brucella abortus bv. 1 str. 9-941 AAX74234.1
   
BruAb1_0990  

Brucella abortus bv. 1 str. 9-941 AAX74341.1
   
BAbS19_I08160  

Brucella abortus S19 ACD72337.1
   
BAbS19_I09320  

Brucella abortus S19 ACD72447.1
   
BCAN_A1001  

Brucella canis ATCC 23365 ABX62054.1
   
BCAN_A0869  

Brucella canis ATCC 23365 ABX61934.1
   
BMEI0995  

Brucella melitensis 16M AAL52176.1
   
BMEI1110  

Brucella melitensis 16M AAL52291.1
   
BAB1_0875  

Brucella melitensis biovar Abortus 2308 CAJ10831.1
   
BAB1_1002 (probable fragment)  

Brucella melitensis biovar Abortus 2308 CAJ10958.1
   
BOV_0848  

Brucella ovis ATCC 25840 ABQ61231.1
   
BR0856  

Brucella suis 1330 AAN29785.1
   
BR0984 (probable fragment)  

Brucella suis 1330 AAN29907.1
   
BSUIS_A0894  

Brucella suis ATCC 23445 ABY37961.1
   
BSUIS_A1028  

Brucella suis ATCC 23445 ABY38087.1
   
Bphy_6144  

Burkholderia phymatum STM815 ACC75197.1
   
Bphy_7163 (possible fragment)  

Burkholderia phymatum STM815 ACC76164.1
   
Bphyt_4030  

Burkholderia phytofirmans PsJN ACD18416.1
   
Bcep1808_2272  

Burkholderia vietnamiensis G4 ABO55271.1
   
Bcep1808_1188  

Burkholderia vietnamiensis G4 ABO54199.1
   
Bxe_B0491  

Burkholderia xenovorans LB400 ABE35456.1
   
Daci_1652  

Delftia acidovorans SPH-1 ABX34295.1
   
Daci_4077  

Delftia acidovorans SPH-1 ABX36708.1
   
Daci_1963  

Delftia acidovorans SPH-1 ABX34603.1
   
DVU_0203  

Desulfovibrio vulgaris str. Hildenborough AAS94687.1
   
DVU_2866  

Desulfovibrio vulgaris str. Hildenborough AAS97338.1
   
DNO_0739  

Dichelobacter nodosus VCS1703A ABQ14181.1
   
Dshi_1757  

Dinoroseobacter shibae DFL 12 ABV93499.1
   
ESA_03320  

Enterobacter sakazakii ATCC BAA-894 ABU78541.1
   
Ent638_1027  

Enterobacter sp. 638 ABP59709.1
   
Eb25  

Escherichia blattae DSM4481AAX12931.1
   
E2348_C_2654  

Escherichia coli 0127:H6 E2348/69 CAS10202.1
   
ECSE_2598  

Escherichia coli SE11 BAG78122.1
   
GbCGDNIH1_1548  

Granulibacter bethesdensis CGDNIH1 ABI62446.1
   
Jann_2334  

Jannaschia sp. CCS1 ABD55251.1
   
Lcho_0570  

Leptothrix cholodnii SP-6 ACB32845.1
   
MS0108  

Mannheimia succiniciproducens MBEL55E AAU36715.1
   
mlr8035  

Mesorhizobium loti MAFF303099 BAB53682.1
   
mll2266  

Mesorhizobium loti MAFF303099 BAB49437.1
   
mlr8547  

Mesorhizobium loti MAFF303099 BAB54407.1
   
Msil_3063  

Methylocella silvestris BL2 ACK51973.1
   
NMCC_0954  

Neisseria meningitidis 053442 ABX73135.1
   
NMC1002  

Neisseria meningitidis FAM18 CAM10269.1
   
NMB1012  

Neisseria meningitidis MC58 AAF41413.1
 2IKB
2IS5
A
A
NMA1230  

Neisseria meningitidis Z2491 CAB84490.1
CAM08426.1
   
Saro_0666  

Novosphingobium aromaticivorans DSM 12444 ABD25113.1
   
Saro_2985  

Novosphingobium aromaticivorans DSM 12444 ABD27420.1
   
Oant_2370  

Ochrobactrum anthropi ATCC 49188 ABS15084.1
   
OCAR_4847  

Oligotropha carboxidovorans OM5 OM5, ATCC 49405ACI91984.1
   
Pden_4087  

Paracoccus denitrificans PD1222 ABL72153.1
   
Pden_3975  

Paracoccus denitrificans PD1222 ABL72041.1
   
ECA2616  

Pectobacterium atrosepticum SCRI1043 CAG75517.1
   
PGN_1670  

Porphyromonas gingivalis ATCC 33277 BAG34189.1
   
PG_0293  

Porphyromonas gingivalis W83 AAQ65511.1
 2NR7
A
Rpic_2285  

Ralstonia pickettii 12J ACD27419.1
   
ORF (fragment)  

Rhodobacter capsulatus MT1131AAF26222.1
   
RSP_2944  

Rhodobacter sphaeroides 2.4.1 ABA79105.1
   
Rsph17025_0900  

Rhodobacter sphaeroides ATCC 17025 ABP69803.1
   
Rsph17029_1590  

Rhodobacter sphaeroides ATCC 17029 ABN76700.1
   
Rpal_3382  

Rhodopseudomonas palustris TIE-1 ACF01884.1
   
RC1_1106  

Rhodospirillum centenum SW SW, ATCC 51521ACI98522.1
   
Rru_A2137  

Rhodospirillum rubrum ATCC 11170 ABC22937.1
   
RD1_3225 (probable fragment)  

Roseobacter denitrificans OCh 114 ABG32727.1
   
Sde_3784  

Saccharophagus degradans 2-40 ABD83039.1
   
SARI_02976  

Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RSK2980ABX22821.1
   
SARI_02388  

Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RSK2980ABX22251.1
   
SeAg_B0018  

Salmonella enterica subsp. enterica serovar Agona str. SL483 ACH51123.1
   
SCH_0016  

Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 AAX63922.1
   
SeD_A0017  

Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 ACH75549.1
   
SEN0015  

Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 CAR31606.1
   
SEN1395  

Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 CAR32974.1
   
SG0016  

Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 CAR35926.1
   
SeHA_C0018  

Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 ACF67320.1
   
SNSL254_A0018  

Salmonella enterica subsp. enterica serovar Newport str. SL254 ACF65205.1
   
SSPA0015  

Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 AKU12601CAR58123.1
   
SSPA1492  

Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 AKU12601CAR59675.1
   
SPA1608  

Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 AAV77535.1
   
SPA0016  

Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 AAV76054.1
   
SPAB_00019  

Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 ABX65463.1
   
SeSA_A0018  

Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 ACF89065.1
   
SeSA_A1323  

Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 ACF92873.1
   
STY0016  

Salmonella enterica subsp. enterica serovar Typhi str. CT18 CAD01169.1
   
STY1889  

Salmonella enterica subsp. enterica serovar Typhi str. CT18 CAD02122.1
   
t1109  

Salmonella enterica subsp. enterica serovar Typhi str. Ty2 AAO68772.1
   
t0016  

Salmonella enterica subsp. enterica serovar Typhi str. Ty2 AAO67750.1
   
STM0016  

Salmonella typhimurium LT2 AAL18980.1
   
Shal_1331  

Shewanella halifaxensis HAW-EB4 ABZ75899.1
   
Sputw3181_2889  

Shewanella sp. W3-18-1 ABM25706.1
   
SPO1878  

Silicibacter pomeroyi DSS-3 AAV95157.1
   
TM1040_1125  

Silicibacter sp. TM1040 ABF63858.1
   
TM1040_0826  

Silicibacter sp. TM1040 ABF63559.1
   
TM1040_1604  

Silicibacter sp. TM1040 ABF64337.1
   
TM1040_1650  

Silicibacter sp. TM1040 ABF64383.1
   
Sala_1717  

Sphingopyxis alaskensis RB2256 ABF53430.1
   
Sfum_1871  

Syntrophobacter fumaroxidans MPOB ABK17556.1
   
Tcr_0674  

Thiomicrospira crunogena XCL-2 ABB41270.1
   
Tery_4946  

Trichodesmium erythraeum IMS101 ABG53860.1
   
VC0395_A0666  

Vibrio cholerae O395 ABQ21837.1
   
VC0395_A0771  

Vibrio cholerae O395 ABQ21574.1
   
VV1_0124  

Vibrio vulnificus CMCP6 AAO08662.1
   
VVA0851  

Vibrio vulnificus YJ016 BAC96877.1
   
Xaut_3175  

Xanthobacter autotrophicus Py2 ABS68405.1
   
XAC1605  

Xanthomonas axonopodis pv. citri str. 306 AAM36473.1
   
XCV1647  

Xanthomonas campestris pv. vesicatoria str. 85-10 CAJ23324.1
   
YE1815  

Yersinia enterocolitica subsp. enterocolitica 8081 CAL11886.1
   
       
        Viruses          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
Bbp2  

Bordetella phage BPP-1 AAR97669.1
   
N-acetylmuramidase (Gp61) 3.2.1.17
Enterobacteria phage N4 ABK54422.1
   
HAPgp45  

Halomonas phage phiHAP-1 ABY90413.1
   
ORF19  

Vibrio phage VHML AAN12317.1
   
ORF26T  

Vibrio phage VP16T AAQ96493.1
   
ORF  

Vibrio phage VP882 ABM73431.1
   


  Last update: 2008 Dec 17   © Copyright 1998-2008 AFMB - CNRS - Universités Aix-Marseille I & II