CAZy ~ Carbohydrate-Active enZymes


   
Glycoside Hydrolase Family 104
  
Known Activitiespeptidoglycan lytic transglycosylase (EC 3.2.1.-)
 
MechanismRetaining
 
NoteCorresponds to family 4 of the peptidoglycan lytic transglycosylases described by N.T. Blackburn and A.J. Clarke (2001) J. Mol. Evol. 52, 78-84
 
Relevant LinksInterPro   PFAM   
 
StatisticsCAZy Entries (87);  GenBank/GenPept (93);  Uniprot (2);  3D(1) : PDB(3);
 
TaxonomyBacteria(70);  Viruses(17);  
 
3D DisplayGH104_3D
 
       
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
AM1_4119  

Acaryochloris marina MBIC11017 ABW29100.1
   
ASA_3842  

Aeromonas salmonicida subsp. salmonicida A449 ABO91797.1
   
ASA_1579  

Aeromonas salmonicida subsp. salmonicida A449 ABO89664.1
   
Ava_C0209  

Anabaena variabilis ATCC 29413 ABA25294.1
   
AZC_3581  

Azorhizobium caulinodans ORS 571 BAF89579.1
   
Bamb_1852 (probable fragment)  

Burkholderia ambifaria AMMD ABI87408.1
   
BCAL2476c  

Burkholderia cenocepacia J2315 CAR52779.1
   
Bcep1808_1314  

Burkholderia vietnamiensis G4 ABO54324.1
   
cce_0006  

Cyanothece sp. ATCC 51142 ACB49358.1
   
E2348_C_2517  

Escherichia coli 0127:H6 E2348/69 CAS10065.1
   
APECO1_4196  

Escherichia coli APEC O1 ABJ01758.1
   
APECO1_3886  

Escherichia coli APEC O1 ABJ02069.1
   
APECO1_4473  

Escherichia coli APEC O1 ABJ00298.1
   
EcHS_A0304  

Escherichia coli HS ABV04693.1
   
ECs1622  

Escherichia coli O157:H7 BAB35045.1
   
Z1876  

Escherichia coli O157:H7 EDL933 AAG55973.1
   
ECH74115_1613  

Escherichia coli O157:H7 str. EC4115 ACI36196.1
   
ECH74115_3045  

Escherichia coli O157:H7 str. EC4115 ACI38938.1
   
ECRS218_0027  

Escherichia coli RS218 ABQ88407.1
   
EcSMS35_4330  

Escherichia coli SMS-3-5 ACB17505.1
   
UTI89_C2990  

Escherichia coli UTI89 ABE08446.1
   
UTI89_C2660  

Escherichia coli UTI89 ABE08126.1
   
KPK_2846  

Klebsiella pneumoniae 342 ACI07627.1
   
KPN_04875  

Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ATCC 700721ABR80218.1
   
Mpe_A1848  

Methylibium petroleiphilum PM1 ABM94806.1
   
M446_4117  

Methylobacterium sp. 4-46 ACA18474.1
   
MAE_54690  

Microcystis aeruginosa NIES-843 BAG05291.1
   
peptidoglycan lytic transglycosylase (AtlA) 3.2.1.-
Neisseria gonorrhoeae MS11AAC45714.1
AAK77140.1
AAW83081.1
   
autolysin A-like protein  

Neisseria gonorrhoeae AAQ03236.1
   
autolysin A (AtlA) (fragment)  

Neisseria gonorrhoeae JC1AAK61534.1
   
NGK_1066 (fragment)  

Neisseria gonorrhoeae NCCP11945 ACF29743.1
   
Npun_F0087  

Nostoc punctiforme PCC 73102 ACC78888.1
   
all7671  

Nostoc sp. PCC 7120 BAB77314.1
   
P9303_15601  

Prochlorococcus marinus str. MIT 9303 ABM78304.1
   
P9303_18641  

Prochlorococcus marinus str. MIT 9303 ABM78606.1
   
PMT0423  

Prochlorococcus marinus str. MIT 9313 CAE20598.1
   
PMT0664  

Prochlorococcus marinus str. MIT 9313 CAE20839.1
   
PP3854  

Pseudomonas putida KT2440 AAN69448.1
   
H16_B1313  

Ralstonia eutropha H16 CAJ96103.1
   
Reut_A2416  

Ralstonia eutropha JMP134 AAZ61778.1
   
RSc1700  

Ralstonia solanacearum GMI1000 CAD15402.1
   
RSMK01628  

Ralstonia solanacearum MolK2 CAQ36282.1
   
SC0349 (LycV)  

Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 AAX64255.1
   
SeD_A2276  

Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 ACH76827.1
   
STY2044  

Salmonella enterica subsp. enterica serovar Typhi str. CT18 CAD05587.1
   
SbBS512_E0252 (fragment)  

Shigella boydii CDC 3083-94 ACD08040.1
   
SFV_0279 (fragment)  

Shigella flexneri 5 str. 8401 ABF02555.1
   
Smlt1054  

Stenotrophomonas maltophilia K279a CAQ44615.1
   
Smal_0896  

Stenotrophomonas maltophilia R551-3 ACF50601.1
   
Smal_2511  

Stenotrophomonas maltophilia R551-3 ACF52212.1
   
sync_1864  

Synechococcus sp. CC9311 ABI45324.1
   
sync_1433  

Synechococcus sp. CC9311 ABI46176.1
   
Syncc9605_1453  

Synechococcus sp. CC9605 ABB35207.1
   
Syncc9605_1036  

Synechococcus sp. CC9605 ABB34794.1
   
Syncc9902_0937  

Synechococcus sp. CC9902 ABB25903.1
   
Syncc9902_1047  

Synechococcus sp. CC9902 ABB26011.1
   
SynRCC307_1446  

Synechococcus sp. RCC307 CAK28349.1
   
SynRCC307_1425  

Synechococcus sp. RCC307 CAK28328.1
   
SynWH7803_0779  

Synechococcus sp. WH 7803 CAK23205.1
   
SynWH7803_1201  

Synechococcus sp. WH 7803 CAK23627.1
   
SYNW1313  

Synechococcus sp. WH 8102 CAE07828.1
   
SYNW1476  

Synechococcus sp. WH 8102 CAE07991.1
   
slr0795  

Synechocystis sp. PCC 6803 BAA10701.1
   
tll1028  

Thermosynechococcus elongatus BP-1 BAC08581.1
   
Tery_3944  

Trichodesmium erythraeum IMS101 ABG52973.1
   
Tery_1004  

Trichodesmium erythraeum IMS101 ABG50382.1
   
XOO2935 + XOO2934  

Xanthomonas oryzae pv. oryzae KACC10331 AAW76188.1
AAW76189.1
   
XOO2786 + XOO2785  

Xanthomonas oryzae pv. oryzae MAFF 311018 BAE69540.1
BAE69541.1
   
PXO_00141 + PXO_00139  

Xanthomonas oryzae pv. oryzae PXO99A ACD58328.1
ACD58330.1
   
YpsIP31758_2206  

Yersinia pseudotuberculosis IP 31758 ABS45940.1
   
       
        Viruses          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
phiO18_34 (LyS)  

Aeromonas phage phiO18P ABG73185.1
   
gp22  

Burkholderia phage BcepC6B AAT38381.1
   
gp18  

Burkholderia phage BcepNazgul AAQ63338.1
AAQ63338.2
   
P  

Enterobacteria phage 186 AAC34155.1
   
lysin  

Enterobacteria phage HK022 AAF30387.1
   
R  

Enterobacteria phage HK620 AAK28884.1
   
gp71  

Enterobacteria phage HK97 AAF31145.1
   
lytic transglycosylase (R;158) 3.2.1.-
Enterobacteria phage lambda AAA96598.1
P03706
1AM7
1D9U
3D3D
A
A
A
gpK  

Enterobacteria phage P2 AAD03276.1
P51771
  
gp10  

Enterobacteria phage PsP3 AAN08372.1
   
orf62  

Enterobacteria phage Sf6 AAQ12247.1
   
R  

Enterobacteria phage SfV AAL89452.1
   
gpK  

Enterobacteria phage WPhi AAN28227.1
   
lysozyme  

Escherichia phage rv5 ABI79155.1
   
Orf31  

Pseudomonas phage D3 AAF80791.1
   
VIP0007  

Salmonella phage E1 CAM33112.1
   
gpK  

Yersinia phage L-413C AAP04446.1
   


  Last update: 2008 Dec 17   © Copyright 1998-2008 AFMB - CNRS - Universités Aix-Marseille I & II