CAZy ~ Carbohydrate-Active enZymes


   
Carbohydrate-Binding Module Family 50
  
Known ActivitiesModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
 
NoteAlso known as LysM domains
 
Relevant LinksInterPro   PFAM   
 
StatisticsCAZy Entries (330);  GenBank/GenPept (899);  Uniprot (98);  3D(1) : PDB(1);
 
TaxonomyBacteria(286);  Eukaryota(28);  Viruses(16);  
 
3D DisplayCBM50_3D
 
        
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
Acid345_0549 n.d.Acidobacteria bacterium Ellin345CP000360
ABF39554.1
   
ACICU_01095 n.d.Acinetobacter baumannii ACICUCP000863.1
ACC56407.1
   
A1S_1055 n.d.Acinetobacter baumannii ATCC 17978CP000521
CP000521
ABO11487.1
ABO11487.2
   
ABAYE2663 n.d.Acinetobacter baumannii AYECU459141
CAM87495.1
   
ABSDF1362 n.d.Acinetobacter baumannii SDFCU468230
CAP00708.1
   
ACIAD1138 n.d.Acinetobacter sp. ADP1CR543861
CAG68020.1
   
AHA_1566 n.d.Aeromonas hydrophila subsp. hydrophila ATCC 7966CP000462
ABK38776.1
   
ASA_2791 n.d.Aeromonas salmonicida subsp. salmonicida A449CP000644
ABO90809.1
   
ABO_1221 n.d.Alcanivorax borkumensis SK2AM286690
CAL16669.1
   
Mlg_1995 n.d.Alkalilimnicola ehrlichei MLHE-1CP000453
ABI57337.1
   
Clos_0408 n.d.Alkaliphilus oremlandii OhILAsCP000853
ABW17970.1
   
Anae109_3908 n.d.Anaeromyxobacter sp. Fw109-5CP000769
ABS28087.1
   
Abu_0975 n.d.Arcobacter butzleri RM4018CP000361
ABV67235.1
   
RBAM_013100 n.d.Bacillus amyloliquefaciens FZB42CP000560
ABS73673.1
   
RBAM_000210 n.d.Bacillus amyloliquefaciens FZB42CP000560
ABS72465.1
   
BA_4156 n.d.Bacillus anthracis str. A2012NC_003995
NP_657516.1
   
BA3668 n.d.Bacillus anthracis str. AmesAE017035
NC_003997
AAP27417.1
NP_845931.1
Q81Y89
  
GBAA3668 n.d.Bacillus anthracis str. Ames 0581AE017334
AAT32777.1
   
BAS3402 n.d.Bacillus anthracis str. SterneAE017225
AAT55709.1
   
BCE3627 n.d.Bacillus cereus ATCC 10987AE017275
NC_003909
AAS42532.1
NP_979924.1
   
BC3607 n.d.Bacillus cereus ATCC 14579AE017009
NC_004722
AAP10540.1
NP_833339.1
Q81AG3
  
cortical fragment-lytic enzyme (CFLE;SleL) n.d.Bacillus cereus IFO13579AB029921
BAA92376.1
   
Bcer98_2256 n.d.Bacillus cereus subsp. cytotoxis NVH 391-98CP000764
ABS22505.1
   
BTZK3314 n.d.Bacillus cereus ZKCP000001
AAU16950.1
   
ABC3113 n.d.Bacillus clausii KSM-K16AP006627
BAD65647.1
   
BH2292 n.d.Bacillus halodurans C-125AP001515
BAB06011.1
   
unnamed protein product n.d.Bacillus licheniformisAX930154
CAF03885.1
   
BLi01486 or BL03524 n.d.Bacillus licheniformis DSM 13 ATCC 14580CP000002
AE017333
CS576244
AAU23032.1
AAU40387.1
CAN86543.1
   
BLi01952 or BL00455 (YdhD) n.d.Bacillus licheniformis DSM 13 ATCC 14580CP000002
AE017333
AAU23483.1
AAU40846.1
   
BLi00025 or BL02368 (YdhD) n.d.Bacillus licheniformis DSM 13 ATCC 14580CP000002
AE017333
AAU21664.1
AAU39010.1
   
SleL n.d.Bacillus megaterium QM B1551EU008333
ABS32202.1
   
BPUM_0513 n.d.Bacillus pumilus SAFR-032CP000813
ABV61208.1
   
BSU05710 (YdhD) n.d.Bacillus subtilis subsp. subtilis str. 168Z99107
NC_000964
CAB12390.1
NP_388452.1
   
BSU00160 (YaaH) n.d.Bacillus subtilis subsp. subtilis str. 168Z99104
NC_000964
CAB11792.1
NP_387897.1
   
BT9727_3364 n.d.Bacillus thuringiensis serovar konkukian str. 97-27AE017355
AAT60495.1
   
BALH_3248 n.d.Bacillus thuringiensis str. Al HakamCP000485
ABK86494.1
   
BVU_1912 n.d.Bacteroides vulgatus ATCC 8482CP000139
ABR39586.1
   
Bd1125 (Mltd) n.d.Bdellovibrio bacteriovorus HD100BX842649
CAE79046.1
   
BAV2937 (MltD) n.d.Bordetella avium 197NAM167904
CAJ50547.1
   
BB4281 n.d.Bordetella bronchiseptica RB50BX640450
NC_002927
CAE34645.1
NP_890816.1
Q7WFJ1
  
BPP3837 n.d.Bordetella parapertussis 12822BX640434
NC_002928
CAE39120.1
NP_885989.1
Q7W434
  
BP3214 n.d.Bordetella pertussis Tohama IBX640420
NC_002929
CAE43480.1
NP_881765.1
Q7VUA4
  
Bpet0629 n.d.Bordetella petrii DSM 12804AM902716
CAP40961.1
   
Bcen_0807 n.d.Burkholderia cenocepacia AU 1054CP000378
ABF75717.1
   
Bcenmc03_1259 n.d.Burkholderia cenocepacia MC0-3CP000958
ACA90434.1
   
BMA0766 n.d.Burkholderia mallei ATCC 23344CP000010
AAU49599.1
   
BMASAVP1_A1276 n.d.Burkholderia mallei SAVP1CP000526
ABM52002.1
   
Bphy_0871 n.d.Burkholderia phymatum STM815CP001043
ACC70060.1
   
Bphyt_2870 n.d.Burkholderia phytofirmans PsJNCP001052
ACD17264.1
   
BURPS1106A_1499 n.d.Burkholderia pseudomallei 1106aCP000572
ABN88742.1
   
BURPS668_1469 n.d.Burkholderia pseudomallei 668CP000570
ABN83069.1
   
BTH_I2787 n.d.Burkholderia thailandensis E264; ATCC 700388CP000086
ABC37085.1
   
CJE0748 n.d.Campylobacter jejuni RM1221CP000025
AAW34541.1
   
JJD26997_1354 n.d.Campylobacter jejuni subsp. doylei 269.97CP000768
ABS43134.1
   
C8J_0604 n.d.Campylobacter jejuni subsp. jejuni 81116CP000814
ABV52203.1
   
Cj0645 n.d.Campylobacter jejuni subsp. jejuni NCTC 11168AL139075
AL111168
NC_002163
CAB75281.1
CAL34790.1
NP_281828.1
Q9PHM2
  
Aasi_0565 n.d.Candidatus Amoebophilus asiaticus 5a2CP001102
ACE05966.1
   
CLOAM0740 n.d.Candidatus Cloacamonas acidaminovoransCU466930
CAO80623.1
   
Daud_0480 n.d.Candidatus Desulforudis audaxviator MP104CCP000860
ACA59026.1
   
Daud_0053 n.d.Candidatus Desulforudis audaxviator MP104CCP000860
ACA58622.1
   
CJA_2053 - Lmt23Bn.d.Cellvibrio japonicus Ueda107CP000934
ACE85097.1
   
Cpar_1232 n.d.Chlorobaculum parvum NCIB 8327CP001099
ACF11637.1
   
Clim_0965 n.d.Chlorobium limicola DSM 245CP001097
ACD90041.1
   
Cphamn1_1124 n.d.Chlorobium phaeobacteroides BS1CP001101
ACE04062.1
   
Cpha266_1087 n.d.Chlorobium phaeobacteroides DSM 266CP000492
ABL65128.1
   
Ctha_1869 n.d.Chloroherpeton thalassium ATCC 35110CP001100
ACF14326.1
   
Ctha_0293 n.d.Chloroherpeton thalassium ATCC 35110CP001100
ACF12764.1
   
CV1253 (MltD) n.d.Chromobacterium violaceum ATCC 12472AE016914
NC_005085
AAQ58928.1
NP_900923.1
   
CKO_02972 n.d.Citrobacter koseri ATCC BAA-895CP000822
ABV14076.1
   
CMS1360 n.d.Clavibacter michiganensis subsp. sepedonicus ATCC33113AM849034
CAQ01471.1
   
CAC2747 n.d.Clostridium acetobutylicum ATCC 824AE007772
AAK80693.1
   
CLB_1241 n.d.Clostridium botulinum A str. ATCC 19397CP000726
ABS34925.1
   
CBO1212 n.d.Clostridium botulinum A str. ATCC 3502AM412317
CAL82759.1
   
CLC_1253 n.d.Clostridium botulinum A str. HallCP000727
ABS36498.1
   
CLK_0816 n.d.Clostridium botulinum A3 str. Loch MareeCP000962
ACA55617.1
   
CLK_0655 n.d.Clostridium botulinum A3 str. Loch MareeCP000962
ACA55280.1
   
CLD_3356 n.d.Clostridium botulinum B1 str. OkraCP000939
ACA46835.1
   
CLI_1294 n.d.Clostridium botulinum F str. LangelandCP000728
ABS42075.1
   
NT01CX_1510 n.d.Clostridium novyi NTCP000382
ABK60508.1
   
Cphy_0492 n.d.Clostridium phytofermentans ISDgCP000885
ABX40879.1
   
Cphy_1652 n.d.Clostridium phytofermentans ISDgCP000885
ABX42024.1
   
CTC01180 n.d.Clostridium tetani E88 MassachusettsAE015940
NC_004557
AAO35753.1
NP_781816.1
   
Cthe_1800 n.d.Clostridium thermocellum ATCC 27405CP000568
ABN53021.1
   
COXBU7E912_1767 n.d.Coxiella burnetii Dugway 7E9-12CP000733
ABS77045.1
   
COXBURSA331_A0420 n.d.Coxiella burnetii RSA 331CP000890
ABX78341.1
   
CBU0313 n.d.Coxiella burnetii RSA 493AE016960
NC_002971
AAO89870.1
NP_819356.1
   
RALTA_A1994 n.d.Cupriavidus taiwanensis LMG 19424CU633749
CAQ69935.1
   
CHU_0026 n.d.Cytophaga hutchinsonii ATCC 33406CP000383
ABG57320.1
   
DET1070 n.d.Dehalococcoides ethenogenes 195CP000027
AAW39696.1
   
DSY4848 n.d.Desulfitobacterium hafniense Y51AP008230
BAE86637.1
   
Dole_0694 n.d.Desulfococcus oleovorans Hxd3CP000859
ABW66504.1
   
DP1676 n.d.Desulfotalea psychrophila LSv54CR522870
CAG36405.1
   
Dde_3580 n.d.Desulfovibrio desulfuricans G20CP000112
ABB40373.1
   
Dvul_2920 n.d.Desulfovibrio vulgaris subsp. vulgaris DP4CP000527
ABM29931.1
   
DVU0041 n.d.Desulfovibrio vulgaris subsp. vulgaris str. HildenboroughAE017309
AAS94525.1
   
Sequence 6539 from patent US 7041814 n.d.Enterobacter cloacae 15842-
ABH76696.1
   
ESA_03128 n.d.Enterobacter sakazakii ATCC BAA-894CP000783
ABU78355.1
   
Ent638_0745 n.d.Enterobacter sp. 638CP000653
ABP59431.1
   
muramidase-2 (mur-2) (fragment) n.d.Enterococcus duransAF346783
AAL83820.1
Q8RPZ1
  
autolysin n.d.Enterococcus faecalisM58002
AAA67325.1
P37710
  
N-acetylglucosaminidase (AtlA;EF0799) 3.2.1.-
Enterococcus faecalis V583AE016949
NC_004668
-
AAO80613.1
NP_814543.1
AAR60023.1
   
Sequence 314 from patent US 6913907 n.d.Enterococcus faecalis V586-
ABA13206.1
   
N-acetylglucosaminidase / -1,4-N-acetylmuramoylhydrolase (Mur2;Mur-2) 3.2.1.96

3.2.1.17
Enterococcus hirae ATCC 9790M77639
AAA24776.1
P39046
  
ECA3343 (MltD) n.d.Erwinia carotovora subsp. atroseptica SCRI1043BX950851
CAG76241.1
   
ETA_26380 n.d.Erwinia tasmaniensis Et1/99CU468135
CAO97684.1
   
ECP_0217 n.d.Escherichia coli 536CP000247
ABG68255.1
   
APECO1_1779 n.d.Escherichia coli APEC O1CP000468
ABI99691.1
   
EcolC_3454 n.d.Escherichia coli C str. ATCC 8739CP000946
ACA79068.1
   
DniR n.d.Escherichia coli CFT073AE016755
NC_004431
AAN78738.1
NP_752194.1
   
EcE24377A_0216 n.d.Escherichia coli E24377ACP000800
ABV18938.1
   
EcHS_A0215 n.d.Escherichia coli HSCP000802
ABV04607.1
   
b0211 (MltD) n.d.Escherichia coli K12U00096
NC_000913
U70214
AAC73316.1
NP_414747.1
AAB08633.1
P23931
P32982
P77350
1E0G
[A]
DniR (ECs0207) n.d.Escherichia coli O157:H7 EDL933AE005196
NC_002655
AAG54507.1
NP_285899.1
   
ECs0207 n.d.Escherichia coli O157:H7 str. SakaiAP002550
NC_002695
BAB33630.1
NP_308234.1
Q8X7Z2
  
EcSMS35_0225 n.d.Escherichia coli SECEC SMS-3-5CP000970
ACB17154.1
   
ECDH10B_0192 n.d.Escherichia coli str. K12 substr. DH10BCP000948
ACB01384.1
   
UTI89_C0230 n.d.Escherichia coli UTI89CP000243
ABE05734.1
   
MltD n.d.Escherichia coli W3110AP009048
BAA77882.2
   
Exig_0493 n.d.Exiguobacterium sibiricum 255-15CP001022
ACB59975.1
   
Fjoh_1913 n.d.Flavobacterium johnsoniae UW101CP000685
ABQ04945.1
   
Fjoh_0976 n.d.Flavobacterium johnsoniae UW101CP000685
ABQ04009.1
   
FP0019 n.d.Flavobacterium psychrophilum JIP02-86AM398681
CAL42138.1
   
FP1205 n.d.Flavobacterium psychrophilum JIP02-86AM398681
CAL43288.1
   
GK2418 n.d.Geobacillus kaustophilus HTA426BA000043
BAD76703.1
   
GK0014 n.d.Geobacillus kaustophilus HTA426BA000043
BAD74299.1
   
GK2077 n.d.Geobacillus kaustophilus HTA426BA000043
BAD76362.1
   
GTNG_2352 n.d.Geobacillus thermodenitrificans NG80-2CP000557
ABO67699.1
   
GTNG_0014 n.d.Geobacillus thermodenitrificans NG80-2CP000557
ABO65401.1
   
GTNG_0363 n.d.Geobacillus thermodenitrificans NG80-2