CAZy ~ Carbohydrate-Active enZymes


   
Carbohydrate-Binding Module Family 40
  
Known ActivitiesModules of approx. 200 residues, found at the N-terminus of GH33 sialidases. Can also be found inserted in the -propeller of GH33 sialidases. The sialic acid binding function has been demonstrated for the N-terminal CBM40 of Vibrio cholerae sialidase.
 
3D Structure StatusFold: lectin-like
 
Relevant LinksHOMSTRAD   InterPro   PFAM   
 
StatisticsCAZy Entries (40);  GenBank/GenPept (61);  Swissprot (10);  3D(4) : PDB(12);
 
TaxonomyBacteria(39);  Eukaryota(1);  
 
3D DisplayCBM40_3D
 
        
        Bacteria          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
exo--sialidase (NanJ;CPE0553) 3.2.1.18
Clostridium perfringens 13AP003187
NC_003366
BAB80259.1
NP_561469.1
Q8XMY5
2V73
[B]
exo--sialidase (NanI;CPE0725) n.d.Clostridium perfringens 13AP003187
NC_003366
BAB80431.1
NP_561641.1
Q8XMG4
  
exo--sialidase (NanH) 3.2.1.18
Clostridium perfringens A99X87369
CAA60796.1
   
CPF_0532 n.d.Clostridium perfringens ATCC 13124CP000246
ABG84247.1
   
CPF_0721 n.d.Clostridium perfringens ATCC 13124CP000246
ABG83208.1
   
sialidase 3.2.1.18
Clostridium tertiumY08695
CAA69951.1
P77848
  
sialidase (NanH) n.d.Erysipelothrix rhusiopathiae FujisawaAB019122
BAB40435.1
Q9AJR8
  
Spea_1515 n.d.Shewanella pealeana ATCC 700345CP000851
ABV86840.1
   
Sequence 3172 from patent US 7074914 n.d.Streptococcus pneumoniae-
-
-
-
-
ABI03133.1
ABI08174.1
ABJ31690.1
ABJ49303.1
ABL17046.1
   
sialidase B (NanB) 3.2.1.18
Streptococcus pneumoniae 6U43526
-
AAC44396.1
AAW08718.1
Q54727
  
SPCG_0853 (NanC) n.d.Streptococcus pneumoniae CGSP14CP001033.1
ACB90105.1
   
SPCG_1660 (NanB) n.d.Streptococcus pneumoniae CGSP14CP001033.1
ACB90912.1
   
SPCG_1665 n.d.Streptococcus pneumoniae CGSP14CP001033
ACB90917.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cl25 = 340 132217AJ968997
CAI94554.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cl37 = 162 GM123AJ969001
CAI94567.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cl50 = 352- E/208AJ968992
CAI94551.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cl54 = 145 GM92AJ968995
CAI94566.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cl56 = 381 110K/70AJ969002
CAI94568.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cl57 = 398AJ969000
CAI94571.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cr13 = 884 141926AJ968998
CAI94555.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cr33 = 910 13B-15FAJ968993
CAI94565.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cr50 = 967 12B-5LAJ968994
CAI94552.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cr51 = 946 12B-21HAJ968999
CAI94556.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae Cr8 = 956 12B-11FAJ968996
CAI94553.1
   
SPD_1499 n.d.Streptococcus pneumoniae D39CP000410
ABJ55283.1
   
SPD_1504 n.d.Streptococcus pneumoniae D39CP000410
ABJ55437.1
   
neuraminidase (NanC) n.d.Streptococcus pneumoniae G54CP001015.1
ACF56230.1
   
neuraminidase (NanA) n.d.Streptococcus pneumoniae G54CP001015.1
ACF55470.1
   
neuraminidase (NanB) n.d.Streptococcus pneumoniae G54CP001015.1
ACF54964.1
   
SPH_1797 (NanA) n.d.Streptococcus pneumoniae Hungary19A-6CP000936
ACA36706.1
   
SPH_1468 n.d.Streptococcus pneumoniae Hungary19A-6CP000936
ACA36743.1
   
neuraminidase (NanA) (fragment) n.d.Streptococcus pneumoniae pn13AJ969003
CAI94569.1
   
NanB n.d.Streptococcus pneumoniae R6AE008521
NC_003098
AAL00335.1
NP_359124.1
Q8CWP8
  
SP1687 (NanB) n.d.Streptococcus pneumoniae TIGR4AE007461
NC_003028
AAK75766.1
NP_346126.1
 2VW0
2VW1
2VW2
[A]
[A]
[A]
SP1326 n.d.Streptococcus pneumoniae TIGR4AE007431
NC_003028
-
AAK75424.1
NP_345784.1
ABA35893.1
Q97Q99
  
sialidase 3.2.1.18
Vibrio cholera 395M83562
M19268
AAA27546.1
AAA27547.1
P37060
1KIT
1W0O
1W0P
 
[A]
[A]
NanH n.d.Vibrio cholerae Amazonia 3509AY825932
AAW31751.2
   
VC1784 n.d.Vibrio cholerae N16961AE004255
NC_002505
AAF94933.1
NP_231419.1
   
VC0395_A1381 n.d.Vibrio cholerae O395CP000627
ABQ19703.1
   
 
        
        Eukaryota          
ProteinEC#OrganismGenBank/GenPeptUniProtPDB/3D
sialidase L 3.2.1.18
Macrobdella decoraU46666
AAC47263.1
Q27701
1SLI
1SLL
2SLI
3SLI
4SLI
 
 
 
 
 
 


  Last update: 2008 Aug 01   © Copyright 1998-2008 AFMB - CNRS - Universités Aix-Marseille I & II