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Polysaccharide Lyase Family 9

Activities in FamilyThiopeptidoglycan lyase (EC 4.2.2.-);
Pectin lyase (EC 4.2.2.10);
Pectate lyase (EC 4.2.2.2);
Rhamnogalacturonan endolyase (EC 4.2.2.23);
Exo-polygalacturonate lyase (EC 4.2.2.9);
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia;
Commercial Enzyme Provider(s)PROZOMIX;
Statistics GenBank accession (4045); Uniprot accession (15); PDB accession (4); 3D entries (2); cryst (0)
Summary
Download PL9 (4284) Taxonomic display Structure (2) Characterized (17)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 psyc5s11_17480   Clostridium gelidum C5S11 BCZ45681.1    
 psyc5s11_17610 (fragment)   Clostridium gelidum C5S11 BCZ45694.1    
 psyc5s11_39310 (PelL)   Clostridium gelidum C5S11 BCZ47864.1    
 C1I91_04500 (fragment)   Clostridium manihotivorum CT4 QAA30980.1    
 CLROS_045440   Clostridium roseum DSM 6424 URZ09128.1    
 CLROS_039330   Clostridium roseum DSM 6424 URZ08551.1     1
 CLROS_045430 (Pell_2)   Clostridium roseum DSM 6424 URZ09127.1    
 CLROS_039010   Clostridium roseum DSM 6424 URZ08519.1     1
 CLROS_009310   Clostridium roseum DSM 6424 URZ05605.1    
 CLROS_013450   Clostridium roseum DSM 6424 URZ06013.1    
 CLROS_006180 (Pell_1)   Clostridium roseum DSM 6424 URZ05294.1     1
 CROST_017660   Clostridium roseum DSM 7320 URZ11050.1    
 CROST_013540   Clostridium roseum DSM 7320 URZ10644.1    
 CROST_010430 (Pell_1)   Clostridium roseum DSM 7320 URZ10335.1     1
 CROST_045930   Clostridium roseum DSM 7320 URZ13815.1    
 CROST_043160   Clostridium roseum DSM 7320 URZ13550.1     1
 CROST_045920 (Pell_2)   Clostridium roseum DSM 7320 URZ13814.1    
 CROST_043480   Clostridium roseum DSM 7320 URZ13582.1     1
 CSACC_20930 (fragment)   Clostridium saccharobutylicum BAS/B3/SW/136 AQS00275.1    
 CSACC_19760 (PelL)   Clostridium saccharobutylicum BAS/B3/SW/136 AQS00160.1    
 CLSA_c19770   Clostridium saccharobutylicum DSM 13864 AGX42961.1    
 CLSA_c20940 (fragment)   Clostridium saccharobutylicum DSM 13864 AGX43075.1    
 CLOSACC_19760 (PelL)   Clostridium saccharobutylicum NCP 195 AQS14143.1    
 CLOSACC_20930 (fragment)   Clostridium saccharobutylicum NCP 195 AQS14258.1    
 CLOSC_19690 (PelL)   Clostridium saccharobutylicum NCP 200 AQR90254.1    
 CLOSC_20860 (fragment)   Clostridium saccharobutylicum NCP 200 AQR90369.1    
 CLOBY_20980 (PelL)   Clostridium saccharobutylicum NCP 258 AQS09959.1    
 Cspa_c05460   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF54340.1    
 Cspa_c28790   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF56642.1     1
 Cspa_c44020 (PelX)   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF58155.1     1
 Cspa_c49330   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF58686.1     1
 Cspa_c16130   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF55383.1    
 CLSAP_47030 (Pell_4)   Clostridium saccharoperbutylacetonicum N1-504 AQR97379.1     1
 CLSAP_15860 (Pell_2)   Clostridium saccharoperbutylacetonicum N1-504 AQR94279.1    
 CLSAP_26320 (Pell_3)   Clostridium saccharoperbutylacetonicum N1-504 AQR95316.1     1
 CLSAP_41660 (PelX)   Clostridium saccharoperbutylacetonicum N1-504 AQR96842.1     1
 CLSAP_05520 (Pell_1)   Clostridium saccharoperbutylacetonicum N1-504 AQR93258.1    
 Clo1100_2686   Clostridium sp. BNL1100 AEY66847.1     1
 ONV75_18555   Clostridium sp. LQ25 UZT08605.1     1
 ONV75_11155   Clostridium sp. LQ25 UZT05144.1    
 SAMN02745906_3046   [Clostridium] sphenoides JCM 1415 ATCC 19403 SET92437.1     1
 KCTCHS21_08200 (YwoF)   Cohnella abietis HS21 BBI31421.1     2
 J4772_19185   Cohnella sp. LGH QTH46355.1     2
 CFU_0291 (YwoF)   Collimonas fungivorans Ter331 AEK60129.1     2
 Cfast33896_21860   Coprobacter fastidiosus JCM 33896 BEG63231.1     1
 MYMAC_005976   Corallococcus macrosporus DSM 14697 ATB50321.1     4
 F0U63_40225   Cystobacter fuscus Cbf 10 WNG20236.1     1
 F0U62_12440   Cystobacter fuscus Cbf 8 WNG24730.1    
 F0U62_41500   Cystobacter fuscus Cbf 8 WNG29770.1     1
 CYFUS_008188   Cystobacter fuscus DSM 52655 ATB42709.1     1
 J1899_21975 (fragment)   Cytobacillus gottheilii 1839 QVY61566.1     2
 RCC89_02330   Cytophagaceae bacterium ABcell3 WMJ72013.1     1
 Daura_23960   Dactylosporangium aurantiacum NRRL B-8018 UWZ58949.1     1
 Daura_17195 (fragment)   Dactylosporangium aurantiacum NRRL B-8018 UWZ59599.1     3
 Dfulv_15185   Dactylosporangium fulvum NRRL B-16292 UWP85504.1    
 Dmats_17610   Dactylosporangium matsuzakiense NRRL B-16293 UWZ48049.1     1
 GCM10020063_051370   Dactylosporangium thailandense JCM 3084 BFE60611.1     1
 GCM10020063_026590   Dactylosporangium thailandense JCM 3084 BFE58133.1     3
 Dvina_21995   Dactylosporangium vinaceum NRRL B-16297 UAC00484.1     1
 Dvina_29020   Dactylosporangium vinaceum NRRL B-16297 UAB92403.1     3
 Dvina_33210   Dactylosporangium vinaceum NRRL B-16297 UAB93135.1     3
 TOL2_C36600 (fragment)   Desulfobacula toluolica Tol2 CCK81816.1     2
 Dtox_2850   Desulfofarcimen acetoxidans DSM 771 ACV63615.1    
 DSCOOX_08960 (fragment)   Desulfosarcina ovata oXyS1 BBO87716.1     2
 DAQ1742_02117 (PelN)   Dickeya aquatica 174/2 SLM63028.1     1
 DAQ1742_04477 (PelX)   Dickeya aquatica 174/2 SLM65220.1     1
 DAQ1742_01421 (PelL)   Dickeya aquatica 174/2 SLM62404.1     1
 QUF31_06305   Dickeya chrysanthemi BRR1 WJM86717.1     1
 QUF31_00890   Dickeya chrysanthemi BRR1 WJM85726.1     1
 QUF31_02835   Dickeya chrysanthemi BRR1 WJM86077.1     1
 exopolygalacturonate lyase (PelX) 4.2.2.9 Dickeya chrysanthemi EC16 AAA24850.1 P22751   1
 pectate lyase (PelL) 4.2.2.2 Dickeya chrysanthemi EC16 AAA99476.1 P0C1A6   1
 Dd1591_2305   Dickeya chrysanthemi Ech1591 ACT07147.1     1
 Dd1591_1528   Dickeya chrysanthemi Ech1591 ACT06383.1     1
 Dd1591_4196   Dickeya chrysanthemi Ech1591 ACT08992.1     1
 pectate lyase (PelL1; PelLI) 4.2.2.2 Dickeya chrysanthemi PY35 AAF05308.1 Q9RP65   1
 exo-polygalacturonate lyase (PelX;Dda3937_00143) 4.2.2.9 Dickeya dadantii 3937 CAB39324.1
ADN00761.1		 E0SDR9
Q9Z5P8		   1
 pectate lyase (PelN; Dda3937_03201) 4.2.2.2 Dickeya dadantii 3937 ADM98300.1     1
 pectate lyase L (PelL; Dda3937_02794) (Pel9A) 4.2.2.2 Dickeya dadantii 3937 ADM99100.1
CAA57041.1		 P0C1A7
Q47473		 1RU4[A] 1
 pectate lyase, partial (PeL)   Dickeya dadantii BTC105 ASV63913.1     1
 KTF62_21645   Dickeya dadantii M2-3 UAY96322.1     1
 KTF62_10070   Dickeya dadantii M2-3 UAY98157.1     1
 KTF62_13925   Dickeya dadantii M2-3 UAY94947.1     1
 KNV89_09835   Dickeya dadantii S3-1 QWT42736.1     1
 KNV89_20420   Dickeya dadantii S3-1 QWT40645.1     1
 KNV89_01950   Dickeya dadantii S3-1 QWT41333.1     1
 JRZ92_13825   Dickeya dianthicola 16JP03 QVH78763.1     1
 JRZ92_09965   Dickeya dianthicola 16JP03 QVH81968.1     1
 JRZ92_21925   Dickeya dianthicola 16JP03 QVH80164.1     1
 JRZ84_21910   Dickeya dianthicola 16JP05 QVH75967.1     1
 JRZ84_09945   Dickeya dianthicola 16JP05 QVH77765.1     1
 JRZ84_13805   Dickeya dianthicola 16JP05 QVH74565.1     1
 JRZ91_13820   Dickeya dianthicola 16LI01 QVH70365.1     1
 JRZ91_21920   Dickeya dianthicola 16LI01 QVH71766.1     1
 JRZ91_09960   Dickeya dianthicola 16LI01 QVH73570.1     1
 JRZ85_09945   Dickeya dianthicola 16LI02 QVH69367.1     1
 JRZ85_21910   Dickeya dianthicola 16LI02 QVH67569.1     1
 JRZ85_13805   Dickeya dianthicola 16LI02 QVH66167.1     1
 JRZ89_13805   Dickeya dianthicola 16LI04 QVH61969.1     1
 JRZ89_09945   Dickeya dianthicola 16LI04 QVH65169.1     1
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