Polysaccharide Lyase Family 9 / Subf 1

Activities in Sub FamilyPectin lyase (EC 4.2.2.10);
Pectate lyase (EC 4.2.2.2);
Rhamnogalacturonan endolyase (EC 4.2.2.23);
Exo-polygalacturonate lyase (EC 4.2.2.9);
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia;
Commercial Enzyme Provider(s)PROZOMIX;
Statistics GenBank accession (1); Uniprot accession (14); PDB accession (4); 3D entries (2); cryst (0)
Bacteria
Protein Name EC# OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
Subf
 rhamnogalacturonan lyase (BT4170;BT_4170) 4.2.2.23 Bacteroides thetaiotaomicron VPI-5482 AAO79275.1
NP_813081.1
Q8A051
5OLQ[A,B,C] 1.48
5OLR[A,B,C] α-L-Rhap-(1-4)-α-D-GalpA-(1-2)-α-L-Rhap
1.07
5OLS[A] α-D-4-deoxy-GlcpA-(1-2)-β-L-Rhap-(1-4)-β-D-GalpA
α-L-Rhap-(1-4)-α-D-GalpA-(1-2)-α-L-Rhap
2.20
1
 pectate lyase L (PelL; Dda3937_02794) (Pel9A) 4.2.2.2 Dickeya dadantii 3937 ADM99100.1
CAA57041.1
P0C1A7
Q47473
1RU4[A] 1.60
1
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