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Polysaccharide Lyase Family 7

Known Activitiespoly(b-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3); a-L-guluronate lyase / G-specific alginate lyase (EC 4.2.2.11); poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-)
3D Structure Statusb-jelly roll
Statistics GenBank accession (202); Uniprot accession (86); PDB accession (8); 3D entries (3); cryst (0)
Summary
All (181) Bacteria (177) Eukaryota (4) Structure (3 ) Characterized (22) Subfamilies (144)
Bacteria
Protein Name EC#OrganismGenBankUniprotPDB/3D Subf
 L083_6325   Actinoplanes sp. N902-109 AGL19835.1     4
 alginate lyase (A1m;AlgL) 4.2.2.11
4.2.2.-		 Agarivorans sp. JAM-A1m BAG70358.1 B5BSV2   5
 alginate lyase (A1mU;Alg)   Agarivorans sp. JAM-A1m BAH70324.1 C4TIN8  
 MASE_04170   Alteromonas macleodii ATCC 27126 AFS36383.1     5
 MASE_04185   Alteromonas macleodii ATCC 27126 AFS36386.1     5
 AMBAS45_04450   Alteromonas macleodii str. 'Balearic Sea AD45' AFT94368.1     5
 AMBAS45_04435   Alteromonas macleodii str. 'Balearic Sea AD45' AFT94365.1     5
 MADE_01238   Alteromonas macleodii 'Deep ecotype' ACG65552.1
AEA98482.1		 B4RUU2   5
 ambt_02000   Alteromonas sp. SN2 AEF01954.1     5
 ambt_09835   Alteromonas sp. SN2 AEF03493.1     5
 AMES_4056   Amycolatopsis mediterranei S699 AEK42663.1
AFO77592.1		     4
 AMED_4104   Amycolatopsis mediterranei U32 ADJ45881.1 D8HQ59   4
 AvCA_23960 (Alya2)   Azotobacter vinelandii CA AGK13250.1     1
 AvCA_31810 (Alya1)   Azotobacter vinelandii CA AGK13249.1     1
 AvCA_13810 (Alya3) (fragment)   Azotobacter vinelandii CA AGK13251.1     5
 AvCA6_31810 (Alya1)   Azotobacter vinelandii CA6 AGK17538.1     1
 AvCA6_23960 (Alya2)   Azotobacter vinelandii CA6 AGK17539.1     1
 AvCA6_13810 (Alya3) (fragment)   Azotobacter vinelandii CA6 AGK17540.1     5
 poly-MG alginate lyase (AlyA1;Avin_31810) 4.2.2.- Azotobacter vinelandii DJ ATCC BAA-1303 ACO79344.1 C1DNZ1   1
 poly-MG alginate lyase (AlyA3;Avin_13810) (fragment) 4.2.2.- Azotobacter vinelandii DJ ATCC BAA-1303 ACO77598.1 C1DQS5   5
 poly-MG alginate lyase (AlyA2;Avin_23960) 4.2.2.- Azotobacter vinelandii DJ ATCC BAA-1303 ACO78583.1 C1DHI8   1
 bgla_2g25850   Burkholderia gladioli BSR3 AEA65013.1     4
 bgla_1g21950   Burkholderia gladioli BSR3 AEA60823.1    
 bgla_2g05120   Burkholderia gladioli BSR3 AEA62988.1     4
 Bcep18194_B2401   Burkholderia sp. 383 ABB12512.1 Q392V4   4
 Caci_1606   Catenulispora acidiphila DSM 44928 ACU70527.1 C7QBF0   4
 Caci_7491   Catenulispora acidiphila DSM 44928 ACU76316.1 C7QB25   4
 Celal_2916   Cellulophaga algicola DSM 14237 ADV50194.1     3
 Celal_3580   Cellulophaga algicola DSM 14237 ADV50841.1     5
 Celal_4215   Cellulophaga algicola DSM 14237 ADV51457.1    
 Celal_2915   Cellulophaga algicola DSM 14237 ADV50193.1     3
 Celly_0299   Cellulophaga lytica DSM 7489 ADY28134.1    
 Celly_3050   Cellulophaga lytica DSM 7489 ADY30867.1     5
 Cphy_0492   Clostridium phytofermentans ISDg ABX40879.1 A9KI45  
 guluronate lyase (alyPG) 4.2.2.11 Corynebacterium sp. ALY-1 ACK10589.1
BAA83339.1		 Q9RB42 1UAI[A] 3
 CA2559_11483   Croceibacter atlanticus HTCC2559 EAP86655.1
EAP86655.1		 A3UA19  
 CA2559_11513   Croceibacter atlanticus HTCC2559 EAP86661.1
EAP86661.1		 A3UA25   5
 CA2559_11528   Croceibacter atlanticus HTCC2559 EAP86664.1
EAP86664.1		 A3UA28  
 alginate lyase 2A (Alg2A) 4.2.2.11 Flavobacterium sp. S20 AEB69783.1    
 FraEuI1c_0158   Frankia sp. EuI1c ADP78246.1 E3J4S7   3
 Glaag_3638   Glaciecola agarilytica 4H-3-7+YE-5 AEE24568.1     5
 Glaag_0816   Glaciecola agarilytica 4H-3-7+YE-5 AEE21779.1     5
 Glaag_3632   Glaciecola agarilytica 4H-3-7+YE-5 AEE24562.1     5
 B932_3538   Gluconobacter oxydans H24 AFW03077.1    
 orf1132   Gramella forsetii KT0803 CAL66119.1 A0M0H4   5
 orf1135   Gramella forsetii KT0803 CAL66122.1 A0M0H7   5
 orf1143   Gramella forsetii KT0803 CAL66130.1 A0M0I5  
 orf1144   Gramella forsetii KT0803 CAL66131.1 A0M0I6  
 AciX8_1881   Granulicella mallensis MP5ACTX8 AEU36217.1     4
 poly(α-L-guluronate) lyase (AlyA) 4.2.2.11 Klebsiella pneumoniae subsp. aerogenes AAA25049.1
ACK10577.1		 Q59478   5
 Kfla_1504   Kribbella flavida DSM 17836 ADB30602.1 D2PLH3   3
 Krodi_0310   Krokinobacter diaphorus 4H-3-7-5 AEE18296.1    
 Lacal_1745   Lacinutrix sp. 5H-3-7-4 AEH01593.1    
 Lacal_1747   Lacinutrix sp. 5H-3-7-4 AEH01595.1     5
 Lacal_1753   Lacinutrix sp. 5H-3-7-4 AEH01601.1    
 Lacal_2207   Lacinutrix sp. 5H-3-7-4 AEH02053.1     5
 alginate lyase (AlgMsp)   Microbulbifer sp. 6532A BAJ62034.1     5
 Niako_5220   Niastella koreensis GR20-10 AEW01457.1     3
 NIS_0185   Nitratiruptor sp. SB155-2 BAF69299.1 A6Q1E0  
 DDD_0347   Nonlabens dokdonensis DSW-6 AGC75474.1    
 AlgM   Paenibacillus sp. 8-5 AFF61390.1     5
 GYMC10_5367   Paenibacillus sp. Y412MC10 ACX67576.1 D3EHA3   5
 alginate lyase / poly-mannuronate lyase (AlxM) 4.2.2.3 Photobacterium sp. ATCC 43367 CAA49630.1 P39049  
 MED152_06195 (Alya3)   Polaribacter sp. MED152 EAQ42287.1     5
 MED152_09785 (Alya7)   Polaribacter sp. MED152 EAQ43005.2     5
 MED152_09805 (Alya9)   Polaribacter sp. MED152 EAQ43009.1     5
 Patl_3639   Pseudoalteromonas atlantica T6c ABG42141.1 Q15PP7   5
 Patl_3645   Pseudoalteromonas atlantica T6c ABG42147.1 Q15PP1   5
 PSHAa0571   Pseudoalteromonas haloplanktis TAC125 CAI85658.1 Q3ILH5   5
 alginate lyase (AlyPI) 4.2.2.11
4.2.2.3		 Pseudoalteromonas sp. CY24 ACM89454.1 D0QMJ7   5
 alginate lyase (AlgL)   Pseudoalteromonas sp. Y-4 AEV45766.1     5
 G655_19415   Pseudomonas aeruginosa B136-33 AGI82798.1     1
 G655_16245   Pseudomonas aeruginosa B136-33 AGI82165.1     1
 PADK2_16760   Pseudomonas aeruginosa DK2 AFM65631.1     1
 PADK2_19810   Pseudomonas aeruginosa DK2 AFM66233.1     1
 PLES_35451   Pseudomonas aeruginosa LESB58 CAW28272.1 B7VB95   1
 PLES_41541   Pseudomonas aeruginosa LESB58 CAW28909.1 B7UX22   1
 PAM18_3262   Pseudomonas aeruginosa M18 AEO75745.1     1
 PAM18_3866   Pseudomonas aeruginosa M18 AEO76347.1     1
 NCGM2_2687   Pseudomonas aeruginosa NCGM2.S1 BAK89544.1     1
 NCGM2_2040   Pseudomonas aeruginosa NCGM2.S1 BAK88899.1     1
 PSPA7_4213   Pseudomonas aeruginosa PA7 ABR82951.1 A6V932   1
 PSPA7_2458   Pseudomonas aeruginosa PA7 ABR82406.1 A6V439   2
 PSPA7_3520   Pseudomonas aeruginosa PA7 ABR80770.1 A6V739   1
 PA1784   Pseudomonas aeruginosa PAO1 AAG05173.1
NP_250475.1		 Q9I2V8   1
 poly-MG alginate lyase (PA1167) 4.2.2.- Pseudomonas aeruginosa PAO1 AAG04556.1
NP_249858.1		 Q9I4H0 1VAV[A,B] 1
 PA14_49320   Pseudomonas aeruginosa UCBPP-PA14 ABJ10335.1 Q02IY7   1
 PA14_41500   Pseudomonas aeruginosa UCBPP-PA14 ABJ10968.1 Q02KS5   1
 PSEBR_a5260   Pseudomonas brassicacearum subsp. brassicacearum NFM421 AEA71750.1     1
 PSEBR_a5261   Pseudomonas brassicacearum subsp. brassicacearum NFM421 AEA71751.1     1
 PSEBR_a5262   Pseudomonas brassicacearum subsp. brassicacearum NFM421 AEA71752.1     1
 PSEBR_a3533   Pseudomonas brassicacearum subsp. brassicacearum NFM421 AEA69871.1     1
 H681_09415   Pseudomonas denitrificans ATCC 13867 AGI23757.1     1
 H681_10710   Pseudomonas denitrificans ATCC 13867 AGI24014.1     1
 H681_12685   Pseudomonas denitrificans ATCC 13867 AGI24407.1     2
 PflA506_4995   Pseudomonas fluorescens A506 AFJ55899.1     1
 PSF113_5479   Pseudomonas fluorescens F113 AEV65451.1     1
 PSF113_5480   Pseudomonas fluorescens F113 AEV65452.1     1
 PSF113_2209   Pseudomonas fluorescens F113 AEV62220.1     1
 Pfl_5256   Pseudomonas fluorescens Pf0-1 ABA76993.1 Q3K5G1   1
 MDS_2620   Pseudomonas mendocina NK-01 AEB58651.1     1
 MDS_0498   Pseudomonas mendocina NK-01 AEB56529.1     1
 Pmen_0463   Pseudomonas mendocina ymp ABP83233.1 A4XPG7   1
 Pmen_1666   Pseudomonas mendocina ymp ABP84430.1 A4XSW4   1
 Pmen_2102   Pseudomonas mendocina ymp ABP84863.1 A4XU47   1
 Pmen_2582   Pseudomonas mendocina ymp ABP85338.1 A4XVH2  
 Pmen_3057   Pseudomonas mendocina ymp ABP85811.1 A4XWU5   1
 H045_18810   Pseudomonas poae RE*1-1-14 AGE27824.1     1
 PFLCHA0_c34530   Pseudomonas protegens CHA0 AGL85223.1     2
 PFLCHA0_c57340   Pseudomonas protegens CHA0 AGL87462.1     1
 PFL_3421   Pseudomonas fluorescens Pf-5 AAY92690.1 Q4KB57   2
 PFL_4740   Pseudomonas fluorescens Pf-5 AAY93971.1 Q4K7G1   2
 PFL_5780   Pseudomonas fluorescens Pf-5 AAY94970.1
AAY94970.2		 Q4K4J5   1
 PPUBIRD1_1988   Pseudomonas putida BIRD-1 ADR59636.1 E4RH24   2
 T1E_3903   Pseudomonas putida DOT-T1E AFO49733.1     2
 Pput_1989   Pseudomonas putida F1 ABQ78129.1 A5W1W9   2
 PputGB1_2129   Pseudomonas putida GB-1 ABY98030.1 B0KMH4   2
 B479_16135   Pseudomonas putida HB3267 PC9 AGA74119.1     2
 PP3774   Pseudomonas putida KT2440 AAN69368.1
NP_745904.1		 Q88GF0   2
 YSA_09341   Pseudomonas putida ND6 AFK71821.1     2
 PPS_3245   Pseudomonas putida S16 AEJ13792.1     2
 PputW619_3207   Pseudomonas putida W619 ACA73697.1 B1JA51   2
 PputUW4_05060   Pseudomonas sp. UW4 AFY22250.1     1
 PSPPH_3296   Pseudomonas syringae pv. phaseolicola 1448A BAA-978 AAZ33537.1 Q48GM8   1
 PSPPH_0498   Pseudomonas syringae pv. phaseolicola 1448A BAA-978 AAZ36046.1 Q48P69   1
 Psyr_0508   Pseudomonas syringae pv. syringae B728a AAY35578.1 Q4ZZ44   1
 Psyr_3376   Pseudomonas syringae pv. syringae B728a AAY38408.1 Q4ZR14   1
 PSPTO3605   Pseudomonas syringae pv. tomato str. DC3000 AAO57079.1
NP_793384.1		 Q87Z26   1
 PSPTO5015   Pseudomonas syringae pv. tomato str. DC3000 AAO58443.1
NP_794748.1		 Q87VC4   1
 RB3601   Rhodopirellula baltica SH 1 CAD73288.1
NP_865604.1		 Q7UTZ6   3
 Sde_1507 (Alg7G)   Saccharophagus degradans 2-40 ABD80769.1 Q21KL0   3
 Sde_2478 (Alg7E)   Saccharophagus degradans 2-40 ABD81738.1
ACK10571.1		 Q21HU1   5
 alginate lyase / poly(β-mannuronate) lyase (Sde_2547) (Alg7D) 4.2.2.3 Saccharophagus degradans 2-40 ABD81807.1
ACK10570.1		 Q21HM2   5
 Sde_2839 (Alg7K)   Saccharophagus degradans 2-40 ABD82096.1
ACK10569.1		 Q21GT3   5
 Sde_2873   Saccharophagus degradans 2-40 ABD82130.1
ACK10574.1		 Q21GP9   5
 Sde_3286 (Alg7A)   Saccharophagus degradans 2-40 ABD82541.1
ACK10572.1
ACK10576.1		 Q21FI8   5
 alginate lyase (AlgMytB)   Saccharophagus sp. Myt-1 BAK40155.1     5
 alginate lyase (AlgMytA)   Saccharophagus sp. Myt-1 BAK53380.1     5
 alginate lyase (AlgMytC)   Saccharophagus sp. Myt-1 BAM76722.1     5
 M5M_00770   Simiduia agarivorans SA1 = DSM 21679 AFU97389.1
AFU97389.2		     3
 M5M_10405   Simiduia agarivorans SA1 = DSM 21679 AFU99262.1
AFU99262.2		    
 M5M_10405   Simiduia agarivorans SA1 = DSM 21679 AFU99262.1
AFU99262.2		    
 M5M_10415   Simiduia agarivorans SA1 = DSM 21679 AFU99264.1     5
 M5M_10420   Simiduia agarivorans SA1 = DSM 21679 AFU99265.1     5
 alginate lyase (A1-II';Aly) 4.2.2.- Sphingomonas sp. A1 BAD16656.1 Q75WP3 2CWS[A]
2Z42[A]
2ZA9[A]
2ZAA[A]
2ZAB[A]
2ZAC[A]
 alginate lyase (aly;A1-I/PolyG+PolyM;A1-II/PolyG;A1-III/PolyM) 4.2.2.3 Sphingomonas sp. A1 2009330A
BAB03312.1		 Q9KWU1  
 alginate lyase (partial)   Sphingomonas sp. ZH0 AGA84517.1    
 Spith_1751   Spirochaeta thermophila DSM 6578 AEJ62011.1    
 Snas_3336   Stackebrandtia nassauensis DSM 44728 ADD43002.1 D3PUI9   3
 STAUR_7643   Stigmatella aurantiaca DW4/3-1 ADO75398.1 Q094P5  
 SAV802   Streptomyces avermitilis MA-4680 BAC68512.1
NP_821977.1		     4
 SBI_01601   Streptomyces bingchenggensis BCW-1 ADI04722.1 D7CFI6   3
 SCO3497 (SCE65.33c)   Streptomyces coelicolor A3(2) CAB61821.1
NP_627698.1		 Q9RKE1   3
 SHJG_8239   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY93505.1     4
 SHJGH_8000   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF67662.1     4
 alginate lyase (Alg) 4.2.2.11 Streptomyces sp. ALG5 ABS59291.1 A7LFP7   3
 alginate lyase (Alg) 4.2.2.11 Streptomyces sp. M3(2009) / M3 ACN56743.1 C0KWY1   3
 alginate lyase (Aly1) (fragment) 4.2.2.- Streptomyces sp. MET0515 AAP47162.1 Q7X4L0   3
 Strvi_4946   Streptomyces violaceusniger Tu 4113 AEM84498.1     3
 Strvi_7598   Streptomyces violaceusniger Tu 4113 AEM86942.1     4
 Tola_1406   Tolumonas auensis DSM 9187 ACQ93021.1 C4LEK4  
 Orf1 (fragment)   uncultured bacterium CAR66215.1 C3W7J9  
 alginate lyase (AlyDW11) 4.2.2.3 uncultured bacterium AEO50363.1     5
 alginate lyase (AlyVGII;AlyVG2)   Vibrio halioticoli IAM14596T AAF22510.1 Q9RGQ5  
 poly(α-L-guluronate) lyase (AlyVGI;AlyVG1) 4.2.2.11 Vibrio halioticoli IAM14596T AAF22512.1 Q9RGQ3   5
 alginate lyase IV (AlyVMIV)   Vibrio midae SY9 ADW41663.1     5
 alginate lyase III (AlyVMIII) (fragment)   Vibrio midae SY9 ADW41662.1    
 alginate lyase III (AlyVMIII) (fragment)   Vibrio midae SY9 ADW41662.1    
 alginate lyase (A9mL;Alg)   Vibrio sp. A9m BAH79133.1 C4TJD4   5
 alginate lyase (A9mC;Alg) (fragment)   Vibrio sp. A9m BAH79132.1 C4TJD3  
 alginate lyase / poly-mannuronate lyase (A9mT;Alg) 4.2.2.3 Vibrio sp. A9m BAH79131.1 C4TJD2  
 alginate lyase / poly-mannuronate lyase (AlyVOB) 4.2.2.3 Vibrio sp. O2 ABB36772.1 Q308B3  
 alginate lyase / poly-mannuronate lyase (AlyVOA) 4.2.2.3 Vibrio sp. O2 ABB36771.1 Q308B4  
 alginate lyase (AlyVI) 4.2.2.11
4.2.2.3		 Vibrio sp. QY101 AAP45155.1 Q53EJ1  
 zobellia_2618 (Alya2)   Zobellia galactanivorans DsiJT CAZ96768.1    
 zobellia_4131 (Alya5)   Zobellia galactanivorans DsiJT CAZ98266.1     5
 zobellia_1182 (Alya1)   Zobellia galactanivorans DsiJT CAZ95239.1     3
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