Polysaccharide Lyase Family 5

Activities in FamilyEndo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 6 barrel
Statistics GenBank accession (1766); Uniprot accession (11); PDB accession (32); 3D entries (4); cryst (0)
Bacteria
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
Subf
 poly(β-mannuronate) lyase / M-specific alginate lyase (PanPL; SG18_20430) 4.2.2.3 Pandoraea apista TF81F4 AJE99968.1  
7WXJ[A] 2.10
7WXK[A] 1.68
7WXL[A] 1.45
7WXM[A] 1.23
7WXN[A] 2.40
7WXO[A] 1.96
7WXP[A] β-D-ManpA-(1-4)-β-D-ManpA
2.20
7WXQ[A] 2.03
7WXR[A] 1.88
7XTE[A] 2.30
7XTF[A] 1.73
 alginate lyase (AlgL;PA3547) 4.2.2.3 Pseudomonas aeruginosa PAO1 AAG06935.1
NP_252237.1
Q06749
4OZV[A] β-D-ManpA
1.64
4OZW[A] 1.64
7SA8[A] 2.50
1
 bifunctional alginate lyase (aly;A1-I;A1-II_PolyG_PL7;A1-III_PolyM_PL5) 4.2.2.3 Sphingomonas sp. A1 BAB03312.1
2009330A
Q9KWU1
1HV6[A] β-D-4-deoxy-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.00
1QAZ[A] 1.78
3EVH[A,B] 2.00
3EVL[A,B] β-D-4-deoxy-ManpA-(1-4)-α-L-GulpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.20
3EW4[A,B] α-L-4-deoxy-AllpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.20
4E1Y[A,B] 2.10
4E23[A,B] α-L-4-deoxy-AllpA-(1-4)-α-L-GulpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.20
4E25[A,B] α-L-4-deoxy-AllpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.21
4F10[A,B] α-L-4-deoxy-AllpA-(1-4)-α-L-GulpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
α-L-GulpA-(1-4)-β-D-ManpA
2.20
4F13[A,B] α-L-4-deoxy-AllpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
β-D-ManpA-(1-4)-β-D-ManpA
2.21
 polysaccharide lyase (Smlt1473) 4.2.2.14 Stenotrophomonas maltophilia K279a CAQ45011.1 B2FHL8
7FHU[A,B] 2.43
7FHW[A,B] 2.06
7FHX[A,B] 2.63
7FHY[A,B] 2.20
7FHZ[A] 2.50
7FI0[A] β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.31
7FI1[A] β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA
2.43
7FI2[A] 2.60
Top


Last update: 2024-03-18 © Copyright 1998-2024
AFMB - CNRS - Université d'Aix-Marseille