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Polysaccharide Lyase Family 3

Known Activitiespectate lyase (EC 4.2.2.2).
3D Structure Statusparallel β-helix
External resourcesInterPro; PFAM;
Statistics GenBank accession (460); Uniprot accession (243); PDB accession (4); 3D entries (2); cryst (0)
Summary
All (395) Bacteria (214) Eukaryota (181) Structure (2 ) Characterized (20) Subfamilies (382)
Eukaryota
Protein Name EC#OrganismGenBankUniprotPDB/3D Subf
 pectate lyase (Aα-Pel-2)   Aphelenchus avenae BAI44499.1
BAI44500.1		 C9K4V8   2
 pectate lyase (Aα-Pel-1)   Aphelenchus avenae BAI44497.1 C9K4V6   2
 AN6748.2   Aspergillus nidulans FGSC A4 EAA58566.1 C8V1Y8   2
 AN2542.2   Aspergillus nidulans FGSC A4 EAA64647.1 C8VPS6   2
 AN6106.2   Aspergillus nidulans FGSC A4 EAA58081.1 C8V2J8   2
 pectate lyase (AN3337.2) 4.2.2.2 Aspergillus nidulans FGSC A4 ABF50862.1
EAA63305.1		 C8VHV4   2
 pectate lyase (AN8453.2) 4.2.2.2 Aspergillus nidulans FGSC A4 ABF50894.1
EAA67075.1		 C8VEG5   2
 AO090005000472   Aspergillus oryzae RIB40 BAE55530.1     2
 AO090038000502 (fragment)   Aspergillus oryzae RIB40 BAE64286.1     2
 AO090010000706   Aspergillus oryzae RIB40 BAE66524.1     2
 Polysaccharide Lyase family 3 protein (Bofut4_p086630.1)   Botryotinia fuckeliana CCD50884.1     2
 Polysaccharide Lyase family 3 protein (Bofut4_p085130.1)   Botryotinia fuckeliana CCD51151.1     2
 pectate lyase (BmPel1)   Bursaphelenchus mucronatus BAE48373.1
BAE48374.1		 Q33CQ1   2
 pectate lyase (BmPel2)   Bursaphelenchus mucronatus BAE48375.1 Q33CQ0   2
 pectate lyase (Pel1;BxPel1) 4.2.2.2 Bursaphelenchus xylophilus BAE48369.1
BAE48371.1		 Q33CQ4   2
 pectate lyase (Pel2;BxPel2) 4.2.2.2 Bursaphelenchus xylophilus BAE48370.1
BAE48372.1		 Q33CQ3   2
 pectate lyase (PL)   Fusarium oxysporum f. cubense ACS78056.1 C6KF40   2
 pectate lyase (PL)   Fusarium oxysporum f. cubense ACS78057.1 C6KF41   2
 pectate lyase (fragment)   Fusarium oxysporum f. sp. lactucae ABR67243.1 B2BE50  
 pectate lyase (Pl1) 4.2.2.2 Fusarium oxysporum f. sp. lycopersici 42-87 AAC64368.1 O93877   2
 Xyl16   Gibberella zeae AAV66343.1 Q49S24   2
 Sequence 123239 from patent US 7214786   Gibberella zeae ABT35769.1     2
 pectate lyase 1 (Pel1) (fragment)   Globodera mexicana Popocatepetl AEA08869.1     3
 pectate lyase 1 (Pel1) (fragment)   Globodera mexicana Popocatepetl AEA08870.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Ballo ballo ACU64853.1 C8CML3   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Ballo ballo ACU64852.1 C8CML2   2
 pectate lyase 1 (Pel1)   Globodera pallida Ballo ballo AEA08860.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Ballo ballo AEA08861.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Ballo ballo AEA08862.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chamancalla ACU64844.1 C8CMK4   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chamancalla ACU64843.1 C8CMK3   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chamancalla ACU64845.1
ACU64846.1
ACU64847.1
ACU64848.1		 C8CMK5   2
 pectate lyase 1 (Pel1)   Globodera pallida Chamancalla AEA08857.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Chamancalla AEA08855.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Chamancalla AEA08856.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chavornay ACU64829.1
ACU64830.1		 C8CMI9   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chavornay ACU64831.1 C8CMJ1   2
 pectate lyase 1 (Pel1)   Globodera pallida Chavornay AEA08843.1
AEA08844.1		     3
 pectate lyase 1 (Pel1)   Globodera pallida Chavornay AEA08845.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chocon ACU64850.1 C8CML0   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chocon ACU64849.1 C8CMK9   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Chocon ACU64851.1 C8CML1   2
 pectate lyase 1 (Pel1)   Globodera pallida Chocon AEA08864.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Chocon AEA08863.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Colque cachi ACU64837.1
ACU64841.1		 C8CMJ7   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Colque cachi ACU64838.1 C8CMJ8   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Colque cachi ACU64835.1
ACU64836.1
ACU64839.1		 C8CMJ5   2
 pectate lyase 1 (Pel1)   Globodera pallida Colque cachi AEA08851.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Colque cachi AEA08849.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Colque cachi AEA08850.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Duddingston ACU64832.1 C8CMJ2   2
 pectate lyase 1 (Pel1)   Globodera pallida Duddingston AEA08848.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Duddingston AEA08847.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Huamacucho AEA08868.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Lacaya ACU64842.1 C8CMK2   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Lacaya ACU64840.1 C8CMK0   2
 pectate lyase 1 (Pel1)   Globodera pallida Lacaya AEA08852.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Lacaya AEA08854.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Lacaya AEA08853.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Otuzco ACU64856.1 C8CML6   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Otuzco ACU64855.1 C8CML5   2
 pectate lyase 1 (Pel1)   Globodera pallida Otuzco AEA08866.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Otuzco AEA08867.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Otuzco AEA08865.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Pukekoe ACU64827.1 C8CMI7   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Pukekoe ACU64825.1
ACU64826.1
ACU64833.1
ACU64834.1		 C8CMI5   2
 pectate lyase 2 (Pel2) (fragment)   Globodera pallida Pukekoe ACU64828.1 C8CMI8   2
 pectate lyase 1 (Pel1)   Globodera pallida Pukekoe AEA08846.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Yana yacu AEA08859.1     3
 pectate lyase 1 (Pel1)   Globodera pallida Yana yacu AEA08858.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis ACO37142.1 C1KBM3   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis ACO37143.1 C1KBM4   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis ACO37144.1 C1KBM5   2
 pectate lyase (Pel1) (fragment)   Globodera rostochiensis ACZ02402.1 D5FPD7   3
 pectate lyase (Pel1) (fragment)   Globodera rostochiensis ACZ02403.1 D5FPD8   3
 pectate lyase 1 (Pel1) (fragment)   Globodera rostochiensis AEA08789.1
AEA08794.1
AEA08797.1
AEA08798.1
AEA08799.1
AEA08800.1
AEA08801.1
AEA08803.1
AEA08804.1
AEA08805.1		     3
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis B1 ACO37146.1 C1KBM7   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis B1 ACO37147.1 C1KBM8   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis B2 ACO37149.1 C1KBN0   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis B4/A ACO37151.1 C1KBN2   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis B4/A ACO37152.1 C1KBN3   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis Hannover ACO37136.1 C1KBL7   2
 Pel1 (fragment)   Globodera rostochiensis Hannover AEA08779.1    
 Pel1 (fragment)   Globodera rostochiensis Hannover AEA08780.1    
 Pel1 (fragment)   Globodera rostochiensis Hannover AEA08781.1    
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis Hermerz ACO37139.1 C1KBM0   2
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis Hermerz ACO37140.1 C1KBM1   2
 pectate lyase 1 (Pel1) (fragment)   Globodera rostochiensis Libelice AEA08809.1     3
 pectate lyase 1 (Pel1) (fragment)   Globodera rostochiensis Libelice AEA08811.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis Obersteibach ACO37138.1 C1KBL9   2
 Pel1 (fragment)   Globodera rostochiensis Obersteibach AEA08784.1    
 Pel1 (fragment)   Globodera rostochiensis Obersteibach AEA08785.1    
 Pel1 (fragment)   Globodera rostochiensis Obersteibach AEA08786.1    
 pectate lyase 2 (Pel2) 4.2.2.2 Globodera rostochiensis RO-1 AAM21970.1 Q53EK1   2
 pectate lyase 1 (Pel1;Pel-1) 4.2.2.2 Globodera rostochiensis RO-1 AAF80746.1
AAF80747.1		 Q9N6M3   3
 pectate lyase 2 (Pel2) (fragment)   Globodera rostochiensis Trenta ACO37135.1 C1KBL6   2
 pectate lyase 1 (Pel1) (fragment)   Globodera rostochiensis Trenta AEA08775.1    
 pectate lyase 1 (Pel1) (fragment)   Globodera rostochiensis Trenta AEA08776.1    
 Pel1 (fragment)   Globodera rostochiensis Trenta AEA08777.1    
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum 'azteca' 75128 ACU64873.1 C8CMN3   2
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum 'azteca' 75128 ACU64874.1 C8CMN4   2
 pectate lyase 1 (Pel1)   Globodera tabacum 'azteca' 75128 AEA08840.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum 'azteca' 75128 AEA08842.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum 'azteca' 75128 AEA08841.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum 'azteca' 75181 ACU64871.1 C8CMN1   2
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum 'azteca' 75181 ACU64872.1 C8CMN2   2
 pectate lyase 1 (Pel1)   Globodera tabacum 'azteca' 75181 AEA08837.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum 'azteca' 75181 AEA08839.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum 'azteca' 75181 AEA08838.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum solanacearum 75140 ACU64869.1 C8CMM9   2
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum solanacearum 75140 ACU64870.1 C8CMN0   2
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum 75140 AEA08835.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum 75140 AEA08836.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum solanacearum GS1 ACU64867.1 C8CMM7   2
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum GS1 AEA08829.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum GS1 AEA08830.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum GS1 AEA08831.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum solanacearum GS2 ACU64868.1 C8CMM8   2
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum GS2 AEA08832.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum GS2 AEA08833.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum solanacearum GS2 AEA08834.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum tabacum Agen ACU64859.1 C8CML9   2
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum tabacum Agen ACU64860.1 C8CMM0   2
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Agen AEA08815.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Agen AEA08816.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Agen AEA08817.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Gt3 AEA08820.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Gt3 AEA08818.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Gt3 AEA08819.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum tabacum Landes ACU64862.1 C8CMM2   2
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Landes AEA08821.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Landes AEA08822.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum tabacum Miller Connecticut ACU64857.1 C8CML7   2
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum tabacum Miller Connecticut ACU64858.1 C8CML8   2
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Miller Connecticut AEA08814.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Miller Connecticut AEA08813.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum tabacum Miller Connecticut AEA08812.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum virginiae 75117 ACU64865.1 C8CMM5   2
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum virginiae 75117 ACU64866.1 C8CMM6   2
 pectate lyase 1 (Pel1)   Globodera tabacum virginiae 75117 AEA08828.1     3
 pectate lyase 2 (Pel2) (fragment)   Globodera tabacum virginiae GV2 ACU64864.1 C8CMM4   2
 pectate lyase 1 (Pel1)   Globodera tabacum virginiae GV2 AEA08823.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum virginiae GV2 AEA08825.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum virginiae GV2 AEA08824.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum virginiae GV3 AEA08826.1     3
 pectate lyase 1 (Pel1)   Globodera tabacum virginiae GV3 AEA08827.1     3
 ORF (fragment)   Glomerella graminicola M2 CAQ16191.1 B5WY51  
 pectate lyase 1 (Pel1)   Heterodera avenae ADD82848.1 E5D240   3
 Pel2 (fragment)   Heterodera avenae ADD73447.1 E5D4D9  
 pectinase (Pel-1)   Heterodera glycines AAK08974.1 Q8T5G7   3
 pectate lyase 2 (Pel2;HsPel2)   Heterodera glycines AAM74954.1 Q8MUK4   3
 pectate lyase (Pel2;Hssp3/4) 4.2.2.2 Heterodera schachtii ABN14272.1 A3F5B9   2
 pectate lyase (Pel1)   Heterodera schachtii ABN14273.1 A3F5C0   3
 KLTH0F00132g (fragment)   Lachancea thermotolerans CBS 6340 CAR23781.1     2
 ORF   Leptosphaeria maculans v23.1.3 CBX92557.1 E4ZMV4   2
 ORF   Leptosphaeria maculans v23.1.3 CBX97807.1 E5A2L1   2
 ORF   Leptosphaeria maculans v23.1.3 CBX99900.1 E5A8F5   2
 ORF   Leptosphaeria maculans v23.1.3 CBY00371.1 E5A9N0   2
 ORF (fragment)   Leptosphaeria maculans v23.1.3 CBX91396.1 E4ZJW1  
 ORF (fragment)   Leptosphaeria maculans v23.1.3 CBY01376.1 E5ADT7   2
 MG05875.4   Magnaporthe grisea 70-15 XP_369589.1     2
 pectate lyase   Meloidogyne enterolobii ADN87334.1 E2JE18   2
 pectate lyase (Pel1;Pel-1)   Meloidogyne incognita AAQ09004.1
AAS88579.1		 Q7YW99   2
 pectate lyase 2 (Pel2;Pel-2)   Meloidogyne incognita AAQ97032.1
AAS88580.1		 Q5QJR1   3
 pectate lyase 3 (Pel3)   Meloidogyne incognita AAW56829.1 Q5I2A6   3
 pectate lyase 1 (Pel1;Pel-1) 4.2.2.2 Meloidogyne javanica AAL66022.1 Q8WR49   2
 MYCTH_102322   Myceliophthora thermophila ATCC 42464 AEO59334.1     2
 pectate lyase A (PelA) 4.2.2.2 Nectria haematococca mpVI AAA33338.1
AAA33339.1
ABH65322.1		 Q04701   2
 pectate lyase B (PelB) 4.2.2.2 Nectria haematococca mpVI AAA87383.1
ABH65323.1		 Q00851   2
 pectate lyase C (PelC) 4.2.2.2 Nectria haematococca mpVI AAA87382.1
ABH65324.1		 Q00843   2
 pectate lyase D (PelD) 4.2.2.2 Nectria haematococca mpVI AAC49420.1
ABH65325.1		 Q00845   2
 NCU08176.1   Neurospora crassa OR74A XP_328882.1     2
 Pc22g05880   Penicillium chrysogenum Wisconsin 54-1255 CAP97876.1 B6HV77   2
 PIIN_04664   Piriformospora indica CCA70730.1     2
 PIIN_06977   Piriformospora indica CCA73022.1     2
 PIIN_06978   Piriformospora indica CCA73023.1     2
 PIIN_09750   Piriformospora indica CCA75760.1     2
 PIIN_02164   Piriformospora indica CCA68300.1     2
 PIIN_08713 (fragment)   Piriformospora indica CCA74755.1     2
 unnamed protein product   Podospora anserina S mat+ CAP61540.1 B2ADM5   2
 unnamed protein product   Podospora anserina S mat+ CAP65892.1 B2APR3   2




Last update: 2012-01-31 © Copyright 1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II