Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1876); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 18 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BACOV975_02972   Bacteroides ovatus V975 SCV09178.1    
 BOVAC1_1971   Bacteroides ovatus VPIC145 CAG9867616.1    
 BOVAC1_5303   Bacteroides ovatus VPIC145 CAG9870948.1    
 BOVAC1_1972   Bacteroides ovatus VPIC145 CAG9867617.1    
 INE81_00635 (fragment)   Bacteroides salyersiae CL06T03C19 QUT74216.1    
 RB604_04730 (fragment)   Bacteroides salyersiae CSP6 WMS11040.1    
 KQP70_17405 (fragment)   Bacteroides salyersiae WAL7960 UYU44314.1    
 KQP71_20545 (fragment)   Bacteroides salyersiae WAL9166 UYU40701.1    
 NXV86_25245   Bacteroides sp. BFG-257 UVO98082.1    
 NXV86_04530   Bacteroides sp. BFG-257 UVO99289.1    
 NQ505_14920   Bacteroides sp. D2 UWN97733.1    
 NQ505_14915   Bacteroides sp. D2 UWN97732.1    
 NQ505_05570   Bacteroides sp. D2 UWO00904.1    
 NQ505_14890   Bacteroides sp. D2 UWN97727.1    
 NQ505_05245   Bacteroides sp. D2 UWO00840.1    
 ITJ87_17675   Bacteroides sp. HF-162 QPH57878.1    
 H8796_15320   Bacteroides sp. M10 QNL37216.1    
 H8796_15345   Bacteroides sp. M10 QNL37220.1    
 H8796_15350   Bacteroides sp. M10 QNL37221.1    
 H8796_05290   Bacteroides sp. M10 QNL40020.1    
 H8796_04960   Bacteroides sp. M10 QNL39956.1    
 NQ510_05400   Bacteroides uniformis ATCC 8492 UWO08380.1    
 NXX72_04970   Bacteroides uniformis BFG-227 UVS18309.1    
 INE75_03653   Bacteroides uniformis CL03T12C37 QUU01289.1    
 INE83_01298   Bacteroides uniformis CL06T03C05 QUT65853.1    
 INE84_01114   Bacteroides uniformis CL06T06C18 QUT61445.1    
 INE90_04080   Bacteroides uniformis CL11T00C07 QUT37272.1    
 I6G58_18455   Bacteroides uniformis FDAARGOS_901 QQA29935.1    
 QWU49_05390   Bacteroides uniformis JCM5828 WNG10528.1    
 Bun01g_09340   Bacteroides uniformis NBRC 113350 BBK86564.1    
 KQP54_10745   Bacteroides uniformis VPI-3537 UYU51291.1    
 P2T61_10455   Bacteroides xylanisolvens AY11-1 WET88058.1    
 NXW81_04725   Bacteroides xylanisolvens BFG-319 UVQ12022.1    
 NXX95_04725   Bacteroides xylanisolvens BFG-514 UVP25203.1    
 INE93_03752   Bacteroides xylanisolvens CL11T00C41 QUT26274.1    
 E2K80_14655   Boseongicola sp. CCM32 QBY01811.1    
 HC231_21830   Brenneria izadpanahii Ir50 QTF10267.1    
 IFJ75_09095   Brevundimonas goettingensis LVF2 QTC92976.1    
 KWG63_15075   Brevundimonas nasdae A30 QYC13512.1    
 KWG56_01520   Brevundimonas nasdae Au29 QYC10725.1    
 KKHFBJBL_02175   Brevundimonas sp. NIBR11 WGM31924.1    
 endo-β-1,4-glucuronan lyase / cellouronate lyase (CUL-I; SH203_01541) 4.2.2.14 Brevundimonas sp. SH203 GAW41138.1
WP_087120298.1
A0A1V1UZ54  
 BADSM9389_16820   Buttiauxella agrestis DSM 9389 BCG09016.1    
 BADSM9389_16870   Buttiauxella agrestis DSM 9389 BCG09021.1    
 MNO13_10440   Buttiauxella ferragutiae H4-C11 UNK63274.1    
 MNO13_10465   Buttiauxella ferragutiae H4-C11 UNK63278.1    
 D8682_05435   Buttiauxella sp. 3AFRM03 AYN26491.1    
 D8682_05410   Buttiauxella sp. 3AFRM03 AYN26487.1    
 RHD99_09500   Buttiauxella sp. R73 WMY76137.1    
 RHD99_09475   Buttiauxella sp. R73 WMY76132.1    
 OH773_08505   Buttiauxella sp. WJP83 WBM72262.1    
 OH773_08480   Buttiauxella sp. WJP83 WBM72257.1    
 Acid_0269   Candidatus Solibacter usitatus Ellin6076 ABJ81281.1    
 Acid_4530   Candidatus Solibacter usitatus Ellin6076 ABJ85491.1    
 Acid_4017   Candidatus Solibacter usitatus Ellin6076 ABJ84983.1    
 PZB72_05850   Catalinimonas niigatensis NBRC 109829 WPP51910.1    
 OLW01_15005   Catenovulum sp. TS8 WAJ72023.1    
 OLW01_16100   Catenovulum sp. TS8 WAJ72263.1    
 Caci_5170   Catenulispora acidiphila DSM 44928 ACU74029.1    
 K8940_05075   Caulobacter segnis CBR1 UAL11661.1    
 MZV50_07160   Caulobacter segnis RL271 USQ97312.1    
 CSW63_17865   Caulobacter sp. FWC26 AZS22335.1    
 CA606_10535   Caulobacter vibrioides CB13b1a ATC32744.1    
 NCTC11466_00817   Cedecea lapagei NCTC11466 VEB95691.1    
 RI049_04065   Cedecea neteri A1 WPU23941.1    
 RJE46_04060   Cedecea neteri A2 WNJ80435.1    
 CO704_03955   Cedecea neteri FDAARGOS_392 ATF91299.1    
 LH23_00735   Cedecea neteri M006 AIR59232.1    
 LH86_00720   Cedecea neteri ND14a AIR63647.1    
 JT31_16955   Cedecea neteri SSMD04 AIR06239.1    
 FOC35_13110   Cedecea sp. FDAARGOS_727 QIX96563.1    
 H0I23_06015 (fragment)   Cellulophaga sp. HaHaR_3_176 QWX85683.1    
 H0I23_06005 (fragment)   Cellulophaga sp. HaHaR_3_176 QWX85682.1    
 Z042_01955   Chania multitudinisentens RB-25 AHG18536.1    
 Z042_01930   Chania multitudinisentens RB-25 AHG18531.1    
 GWR21_16280   Chitinophaga agri H33E-04 QHS61100.1    
 GWR21_02395   Chitinophaga agri H33E-04 QHS58483.1    
 DLD77_03220   Chitinophaga alhagiae T22 AWO00778.1    
 MYF79_00575   Chitinophaga filiformis YT5 UPK69782.1    
 MYF79_17095   Chitinophaga filiformis YT5 UPK66657.1    
 MKQ68_14260   Chitinophaga horti R8 UYQ91254.1    
 HF324_21520   Chitinophaga oryzae 1303 QJB40299.1    
 KTO58_19605   Chitinophaga pendula MD30B UCJ05879.1    
 Cpin_4528   Chitinophaga pinensis DSM 2588 ACU61970.1    
 Cpin_0086   Chitinophaga pinensis DSM 2588 ACU57592.1    
 HF329_21630   Chitinophaga sp. 1310 QJB33775.1    
 CK934_09195   Chitinophaga sp. MD30 ASZ11124.1    
 FW415_20945   Chitinophaga sp. XS-30 QEH43198.1    
 SR908_15895   Chromohalobacter canadensis ATCC 43984 WQH08929.1    
 D4L85_25055   Chryseolinea soli KIS68-18 AYB35698.1    
 R1016_15980   Citrobacter koseri K1018 WOI93173.1    
 R1015_20660   Citrobacter koseri K1118 WOJ21560.1    
 R1019_15860   Citrobacter koseri K118 WOJ06263.1    
 R0291_15930   Citrobacter koseri K1219 WOP81796.1    
 R1157_16080   Citrobacter koseri K4022 WOJ01855.1    
 R1018_15890   Citrobacter koseri K616 WOJ16424.1    
 TUM13189_31750   Citrobacter koseri TUM13189 BDG85615.1    
 TUM20903_31530   Citrobacter koseri TUM20903 BDG90415.1    
 CA2015_3760   Cyclobacterium amurskyense KCTC 12363 AKP53134.1    
 Cycma_3828   Cyclobacterium marinum DSM 745 AEL27539.1    
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