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Polysaccharide Lyase Family 38

Activities in FamilyExo-β-1,4-glucuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Endo-β-1,4-glucuronan lyase (EC 4.2.2.14);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 7 barrel
NoteFamily created after Kikuchi & Konno et al., 2019 [PMID= 31546007] who have shown that the endo-b-1,4-glucuronan lyase activity of the SH203_01541 protein in Brevundimonas sp. SH203; very distant relatedness to PL5
Statistics GenBank accession (1876); Uniprot accession (2); PDB accession (3); 3D entries (2); cryst (0)
Summary
Download PL38 (2482) Taxonomic display Structure (2) Characterized (4)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 18 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 SI90_11055   Akkermansia muciniphila H2 QAR50866.1    
 AKMU_09090 (fragment)   Akkermansia muciniphila JCM 30893 BBP48163.1    
 GXM23_04900 (fragment)   Akkermansia muciniphila JCM30893 QIA35781.1    
 J4Z34_04270 (fragment)   Akkermansia muciniphila KGMB01988 QTF06068.1    
 J4Z33_04270 (fragment)   Akkermansia muciniphila KGMB01989 QTF01445.1    
 J4Z36_04270 (fragment)   Akkermansia muciniphila KGMB01990 QTF03756.1    
 J4027_04270 (fragment)   Akkermansia muciniphila KGMB02009 QTE99131.1    
 A4V05_11260   Akkermansia muciniphila YL44 ANU61961.1
QIG73295.1
QQR32901.1		    
 ADH72_06995   Akkermansia muciniphila YL44 ASB35452.1    
 RGQ01_05095   Akkermansia sp. EB-AMDK43 WMX39122.1    
 O5O44_04790   Algibacter luteus HNIBRBA226 WJJ97702.1    
 NZD89_15830 (fragment)   Alicyclobacillus fastidiosus DSM 17978 WAH39869.1    
 NZD89_24855 (fragment)   Alicyclobacillus fastidiosus DSM 17978 WAH41436.1    
 AWOD_II_1137   Aliivibrio wodanis CED57752.1    
 NQ519_13940   Alistipes senegalensis JC50 UWN66811.1    
 ORF   Alteromonas sp. LOR WP_032096201.1    
 AV939_17525   Alteromonas sp. Mac1 AMJ88211.1    
 AV940_17225   Alteromonas sp. Mac2 AMJ92068.1    
 ISP_006156   Amycolatopsis mediterranei ISP5501 UZF72771.1    
 ISP_000322 (fragment)   Amycolatopsis mediterranei ISP5501 UZF75977.1    
 ISP_000323 (fragment)   Amycolatopsis mediterranei ISP5501 UZF67327.1    
 B737_5935   Amycolatopsis mediterranei RB AGT86599.1    
 B737_0327   Amycolatopsis mediterranei RB AGT80991.1    
 RAM_30865   Amycolatopsis mediterranei S699 AEK44648.1    
 AMES_5935   Amycolatopsis mediterranei S699 AFO79471.1    
 RAM_01675   Amycolatopsis mediterranei S699 AEK38830.1    
 AMES_0326   Amycolatopsis mediterranei S699 AFO73862.1    
 AMED_6019   Amycolatopsis mediterranei U32 ADJ47760.1    
 AMED_0331   Amycolatopsis mediterranei U32 ADJ42154.1    
 QRX60_09555   Amycolatopsis mongoliensis 4-36 WIY04071.1    
 QRX60_46925   Amycolatopsis mongoliensis 4-36 WIY01481.1    
 MUY14_05795   Amycolatopsis pretoriensis FBCC-B4732 UOX90141.1    
 MUY14_34865   Amycolatopsis pretoriensis FBCC-B4732 UOX86885.1    
 VSH64_16870   Amycolatopsis rhabdoformis NCIMB 14900 WSE33760.1    
 VSH64_17600   Amycolatopsis rhabdoformis NCIMB 14900 WSE33896.1    
 QRX50_27635   Amycolatopsis sp. 2-15 WIX75299.1    
 QRX50_28240   Amycolatopsis sp. 2-15 WIX75407.1    
 QP939_32680   Amycolatopsis sp. 2-2 WIV53620.1    
 QP939_10990   Amycolatopsis sp. 2-2 WIV59108.1    
 CU254_21930   Amycolatopsis sp. AA4 ATY12817.1    
 HUW46_07273   Amycolatopsis sp. CA-230715 QWF83830.1    
 QRY02_21260   Amycolatopsis sp. DG1A-15b WIX92827.1    
 QRY02_39315   Amycolatopsis sp. DG1A-15b WIX87150.1    
 K1T34_50175   Amycolatopsis sp. DSM 110486 QYN20559.1    
 K1T34_50920   Amycolatopsis sp. DSM 110486 QYN20695.1    
 L3Q65_16985   Amycolatopsis sp. FU40 UKD58351.1    
 HUT10_12085   Amycolatopsis sp. Hca4 QKV74425.1    
 HUT10_25765   Amycolatopsis sp. Hca4 QKV76806.1    
 HKG02Y_51870   Amycolatopsis sp. TUA-HKG02Y BCV13794.1    
 MUY22_47485   Amycolatopsis sp. WQ 127309 UOZ06362.1    
 MUY22_44960   Amycolatopsis sp. WQ 127309 UOZ05902.1    
 Anae109_3266   Anaeromyxobacter sp. Fw109-5 ABS27459.1    
 FF099_03700   Aquisalinus flavus D11M-2 UNE47223.1    
 FSB73_05535   Arachidicoccus ginsenosidivorans Gsoil 809 QEC74197.1    
 K9M52_06210   Arachidicoccus terrestris 5GH13-10 UAY57306.1    
 Astex_3552   Asticcacaulis excentricus CB 48 ADU15182.1    
 EM6_3366 (fragment)   Asticcacaulis excentricus M6 BBF82725.1    
 EM6_3365 (fragment)   Asticcacaulis excentricus M6 BBF82724.1    
 LH365_18230   Asticcacaulis sp. AND118 UDF05692.1    
 OVA03_16655   Asticcacaulis sp. SL142 WAC48296.1    
 K6V21_04335   Bacteroides cellulosilyticus BFG-250 UBD70665.1    
 K6V21_24185   Bacteroides cellulosilyticus BFG-250 UBD69429.1    
 NXW88_04835   Bacteroides cellulosilyticus BFG-371 UVP52259.1    
 NXW88_26275   Bacteroides cellulosilyticus BFG-371 UVP51009.1    
 INE78_01156   Bacteroides cellulosilyticus CL06T03C01 QUT89187.1    
 INE78_02430   Bacteroides cellulosilyticus CL06T03C01 QUT90438.1    
 NWT25_04465   Bacteroides cellulosilyticus PL2022 UWZ90492.1    
 NWT25_23515   Bacteroides cellulosilyticus PL2022 UWZ89271.1    
 BcellWH2_02542 (Ugl_3)   Bacteroides cellulosilyticus WH2 ALJ59781.1    
 BcellWH2_01187   Bacteroides cellulosilyticus WH2 ALJ58449.1    
 BacF7301_07715   Bacteroides faecium CBA7301 QIU94039.1    
 BacF7301_04385   Bacteroides faecium CBA7301 QIU93437.1    
 BacF7301_15330   Bacteroides faecium CBA7301 QIU95436.1    
 BacF7301_15335   Bacteroides faecium CBA7301 QIU95437.1    
 BacF7301_11890   Bacteroides faecium CBA7301 QIU94800.1    
 Bache_0602   Bacteroides helcogenes P 36-108 ADV42627.1    
 DXK01_003865   Bacteroides intestinalis APC919/174 QDO68113.1    
 DXK01_020465   Bacteroides intestinalis APC919/174 QDO71121.1    
 I1225_03870   Bacteroides intestinalis APC919/174 substr. 8T UCB36344.1    
 I1225_20315   Bacteroides intestinalis APC919/174 substr. 8T UCB35311.1    
 I1224_03870   Bacteroides intestinalis APC919/174 substr. 8W UCB40586.1    
 I1224_20330   Bacteroides intestinalis APC919/174 substr. 8W UCB39554.1    
 KQP55_14235   Bacteroides nordii WAL7935 UYU47828.1    
 KQP55_12460   Bacteroides nordii WAL7935 UYU47497.1    
 KQP55_13765   Bacteroides nordii WAL7935 UYU47736.1    
 Bovatus_00165   Bacteroides ovatus ATCC 8483 ALJ44837.1    
 Bovatus_00170   Bacteroides ovatus ATCC 8483 ALJ44842.1   3NFV[A]
3NNB[A]
 Bovatus_00171   Bacteroides ovatus ATCC 8483 ALJ44843.1    
 NQ517_14505   Bacteroides ovatus ATCC 8483 UWN90162.1    
 NQ517_14530   Bacteroides ovatus ATCC 8483 UWN90167.1    
 NXW52_09145   Bacteroides ovatus BFG-464 UVP12769.1    
 NXW19_05105   Bacteroides ovatus BFG-465 UVP78242.1    
 INE80_02430   Bacteroides ovatus CL06T03C20 QUT80426.1    
 MG-specific alginate lyase (BoPL38; OU990_24705) 4.2.2.- Bacteroides ovatus CP926 WII03607.1   8BDQ[A,B,C,D]
 I6J65_23735   Bacteroides ovatus FDAARGOS_1235 QRQ56512.1    
 I6J65_23745   Bacteroides ovatus FDAARGOS_1235 QRQ56514.1    
 I6J65_23710   Bacteroides ovatus FDAARGOS_1235 QRQ56508.1    
 RJT06_16410   Bacteroides ovatus H-1813 MDV3118127.1    
 BACOV975_02965   Bacteroides ovatus V975 SCV09171.1    
 BACOV975_02970   Bacteroides ovatus V975 SCV09176.1    
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