Polysaccharide Lyase Family 35

Activities in Familychondroitin lyase / chondroitinase (EC 4.2.2.-)
Mechanism b-elimination
NoteThe endo-chondroitin lyase activity of the Victivallis vadensis ATCC BAA-548 protein was shown by Helbert in al., PNAS (2019) [PMID=30850540]
Statistics GenBank accession (228); Uniprot accession (5);
All (225) Bacteria (203) Eukaryota (22) Characterized (1)
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 SAMN04489717_4596   Actinopolymorpha singaporensis DSM 22024 SDS98549.1    
 Pan181_01270   Aeoliella mucimassa Pan181 QDU53948.1    
 AI2BBH_09490   Alistipes indistinctus 2BBH45 BCG53903.1    
 AI2BBH_14970   Alistipes indistinctus 2BBH45 BCG54451.1    
 AL1_00220   Alistipes shahii WAL 8301 CBK62761.1    
 GFH31_01470   Alistipes sp. dk3624 QGA22620.1    
 STSP2_00135   Anaerohalosphaera lusitana ST-NAGAB-D1 AQT66997.1    
 FRZ59_13730   Anseongella ginsenosidimutans Gsoil 524 QEC54287.1    
 E0W69_009485   Arachidicoccus sp. B3-10 QES88877.1    
 DJ013_19800   Arcticibacterium luteifluviistationis SM1504 AWW00294.1    
 CGK93_21970   Arthrobacter sp. YN ASN22032.1    
 C2I06_15955   Bacillus circulans PK3_109 AYV68237.1    
 CGC64_09420   Bacteroides caccae ATCC 43185 ASM66151.1    
 CGC64_04100   Bacteroides caccae ATCC 43185 ASM65217.1    
 C3V43_13875   Bacteroides heparinolyticus F0111 AVM58699.1    
 DXK01_010245   Bacteroides intestinalis APC919/174 QDO69279.1    
 DXK01_019590   Bacteroides intestinalis APC919/174 QDO70965.1    
 DYI28_18375   Bacteroides ovatus 3725 D1 iv QDM10507.1    
 DYI28_18380   Bacteroides ovatus 3725 D1 iv QDM10508.1    
 Bovatus_03246   Bacteroides ovatus ATCC 8483 ALJ47854.1    
 Bovatus_03245   Bacteroides ovatus ATCC 8483 ALJ47853.1    
 FOC41_23485   Bacteroides ovatus FDAARGOS_733 QGT73728.1    
 FOC41_17475   Bacteroides ovatus FDAARGOS_733 QGT72631.1    
 FOC41_17470   Bacteroides ovatus FDAARGOS_733 QGT72630.1    
 BACOV975_01019   Bacteroides ovatus V975 SCV07258.1    
 BACOV975_01020   Bacteroides ovatus V975 SCV07259.1    
 BacF7301_04335   Bacteroides sp. CBA7301 QIU93428.1    
 BacF7301_04900   Bacteroides sp. CBA7301 QIU93529.1    
 BacF7301_04895   Bacteroides sp. CBA7301 QIU93528.1    
 H8796_05500   Bacteroides sp. M10 QNL40059.1    
 H8796_05505   Bacteroides sp. M10 QNL40060.1    
 H8796_04905   Bacteroides sp. M10 QNL39945.1    
 FKZ68_04800   Bacteroides xylanisolvens H207 QDH53590.1    
 FKZ68_04805   Bacteroides xylanisolvens H207 QDH53591.1    
 BXY_22890   Bacteroides xylanisolvens XB1A CBK67360.1 D6CYV8  
 BXY_22900   Bacteroides xylanisolvens XB1A CBK67361.1 D6CYV9  
 C4H11_12355   Bacteroides zoogleoformans ATCC 33285 AVM53611.1    
 Bcav_3390   Beutenbergia cavernae DSM 12333 ACQ81632.1 C5C207  
 Bcav_3391   Beutenbergia cavernae DSM 12333 ACQ81633.1    
 DLD77_05085   Chitinophaga alhagiae T22 AWO02230.1    
 FW415_20940   Chitinophaga sp. XS-30 QEH43197.1    
 NIES4102_07860   Chondrocystis sp. NIES-4102 BAZ43784.1    
 D4L85_03570   Chryseolinea soli KIS68-18 AYB29714.1    
 BTM20_08950   Clostridium chauvoei 12S0467 ATD55359.1    
 BTM21_04090   Clostridium chauvoei DSM 7528 ATD56968.1    
 CCH01_16760   Clostridium chauvoei JF4335 SLK19471.1    
 C6H62_08185   Clostridium chauvoei SBP 07/09 QBJ75653.1    
 Clopa_0870   Clostridium pasteurianum BC1 AGK95892.1    
 CLPA_c06660   Clostridium pasteurianum DSM 525 = ATCC 6013 AJA50754.1

AOZ74160.1
   
 AQ984_03195   Clostridium pasteurianum M150B AOZ77957.1    
 CP523_14100   Clostridium septicum DSM 7534 AYE35469.1    
 EI377_09005   Clostridium septicum VAT12 QAS60856.1    
 Cop2CBH44_32130   Coprobacter sp. 2CBH44 BCI64860.1    
 Cop2CBH44_32080   Coprobacter sp. 2CBH44 BCI64855.1    
 Cop2CBH44_17110   Coprobacter sp. 2CBH44 BCI63358.1    
 Cop2CBH44_26790   Coprobacter sp. 2CBH44 BCI64326.1    
 Cop2CBH44_04100   Coprobacter sp. 2CBH44 BCI62057.1    
 Mal65_35730 (HepB)   Crateriforma conspicua Mal65 QDV64416.1    
 CA2015_2418   Cyclobacterium amurskyense KCTC 12363 AKP51834.1    
 CA2015_3840   Cyclobacterium amurskyense KCTC 12363 AKP53208.1    
 CA2015_3766   Cyclobacterium amurskyense KCTC 12363 AKP53139.1    
 CA2015_3293   Cyclobacterium amurskyense KCTC 12363 AKP52685.1    
 Cycma_2495   Cyclobacterium marinum DSM 745 AEL26235.1    
 Cycma_3426   Cyclobacterium marinum DSM 745 AEL27149.1    
 Cycma_3894   Cyclobacterium marinum DSM 745 AEL27603.1    
 SAMN06298216_3502   Cytophagales bacterium TFI 002 SOE23113.1    
 SAMN06298216_3370   Cytophagales bacterium TFI 002 SOE22974.1    
 Dfer_1685   Dyadobacter fermentans DSM 18053 ACT92927.1    
 FKX85_17825   Echinicola sp. LN3S3 QDH80798.1    
 DN752_02265   Echinicola strongylocentroti MEBiC08714 AWW29053.1    
 Echvi_3787   Echinicola vietnamensis DSM 17526 AGA79999.1    
 BBD28_12325   Elizabethkingia anophelis 0422 AQW91394.1    
 GJV56_04900   Elizabethkingia anophelis 296-96 QGN22011.1    
 BBD31_02850   Elizabethkingia anophelis 3375 AQW96890.1    
 EAAG1_007405   Elizabethkingia anophelis Ag1 ATC39687.1    
 CMV40_07405   Elizabethkingia anophelis AR4-6 ATC47042.1    
 CMV41_07405   Elizabethkingia anophelis AR6-8 ATC43366.1    
 A2T72_09175   Elizabethkingia anophelis CSID_3000521207 AMX51612.1    
 A2T74_09175   Elizabethkingia anophelis CSID_3015183678 AMR41512.1    
 A2T59_09175   Elizabethkingia anophelis CSID_3015183681 AMX55002.1    
 A4C56_09175   Elizabethkingia anophelis CSID_3015183684 AMX48153.1    
 AYC66_00130   Elizabethkingia anophelis E6809 AQX49186.1    
 AYC67_00130   Elizabethkingia anophelis F3543 AQX87526.1    
 AL491_08820   Elizabethkingia anophelis FDAARGOS_132 AVF48170.1    
 AL492_11230   Elizabethkingia anophelis FDAARGOS_134 AVF52164.1    
 A6J37_16580   Elizabethkingia anophelis FDAARGOS_198 ASV80098.1    
 M876_12940   Elizabethkingia anophelis FMS-007 AKH95473.1    
 JUNP353_0902   Elizabethkingia anophelis JUNP 353 BBQ06331.1    
 BD94_3097   Elizabethkingia anophelis NUHP1 AIL46872.1    
 BAZ09_007190   Elizabethkingia anophelis R26 ATC36010.1    
 EIY88_04875   Elizabethkingia anophelis SUE QNV08664.1    
 AYC65_01410   Elizabethkingia bruuniana G0146 AQX83757.1    
 BBD32_03495   Elizabethkingia endophytica F3201 AQX00592.1    
 BBD30_10785   Elizabethkingia endophytica JM-87 AQW94640.1    
 BBD33_07435   Elizabethkingia meningoseptica G4076 AQX05090.1    
 BBD35_09610   Elizabethkingia meningoseptica G4120 AQX12612.1    
 B5G46_07425   Elizabethkingia meningoseptica KC1913 AQX47133.1    
 NCTC10016_00925   Elizabethkingia meningoseptica NCTC10016 SQG06023.1    
 VO54_03461   Elizabethkingia miricola BM10 AJW64891.1    
 CQS02_10605   Elizabethkingia miricola EM798-26 ATL43718.1    
 FE632_05520   Elizabethkingia miricola FL160902 QHQ86269.1    
 FCS00_15310   Elizabethkingia sp. 2-6 QCO47672.1    
 FGE20_03115 (fragment)   Elizabethkingia sp. JS20170427COW QCX52803.1    
 BBD34_05300   Elizabethkingia ursingii G4123 AQX08094.1    
 Emtol_0416   Emticicia oligotrophica DSM 17448 AFK01570.1    
 CKA38_04060   Ereboglobus luteus Ho45 AWI08535.1    
 H9Q80_00695   Eubacterium sp. NSJ-61 QNM12507.1    
 D1013_12275   Euzebyella marina RN62 AYN68091.1    
 FAES_2404   Fibrella aestuarina BUZ 2 CCH00413.1    
 A6C57_20495   Fibrella sp. ES10-3-2-2 ARK12523.1    
 D770_06835   Flammeovirgaceae bacterium 311 AHM59630.1    
 FSB75_19265   Flavisolibacter ginsenosidimutans Gsoil 636 QEC57955.1    
 E1750_03305   Flavobacterium nackdongense QBN17868.1    
 E1750_03355   Flavobacterium nackdongense QBN17878.1    
 E1750_03300   Flavobacterium nackdongense QBN17867.1    
 E1750_03380   Flavobacterium nackdongense QBN17882.1    
 Halhy_1895   Haliscomenobacter hydrossis DSM 1100 AEE49780.1    
 Halhy_3573   Haliscomenobacter hydrossis DSM 1100 AEE51427.1    
 IM660_14765   Haloactinobacterium sp. RN3S43 QOR69898.1    
 AXW84_20290   Hymenobacter sp. PAMC 26628 AMJ67497.1    
 GT409_07585   Kiritimatiellaeota bacterium S-5007 QHI69317.1    
 HHL09_06645   Luteolibacter sp. G-1-1-1 QJE95471.1    
 HW566_11060   Microbacterium oleivorans I46 QLD12264.1    
 BO218_13520 (fragment)   Microbacterium paludicola CC3 APF35090.1    
 SAMN04489810_3488   Microbacterium pygmaeum DSM 23142 SDH62876.1    
 BJP65_06425   Microbacterium sp. BH-3-3-3 AOX45488.1    
 A8C56_05745   Niabella ginsenosidivorans BS26 ANH83725.1    
 NIASO_04790   Niabella soli DSM 19437 AHF14693.1    
 NIASO_06945   Niabella soli DSM 19437 AHF14965.1    
 OPIT5_14515   Opitutaceae bacterium TAV5 AHF91245.1    
 OPIT5_14565   Opitutaceae bacterium TAV5 AHF91254.1    
 OPIT5_15605   Opitutaceae bacterium TAV5 AHF91434.1    
 BBD41_21650   Paenibacillus ihbetae IHBB 9852 ANY74958.1    
 D5F53_17370   Paenibacillus lautus E7593-69 AYB44936.1    
 IJ21_17060   Paenibacillus sp. 32O-W ALS27107.1    
 JNUCC32_12850   Paenibacillus sp. JNUCC-32 QOT12851.1    
 EI981_27715   Paenibacillus sp. MBLB1234 AZS17848.1    
 H7F31_07015   Paenibacillus sp. PAMC21692 QNK58643.1    
 H7F31_29305   Paenibacillus sp. PAMC21692 QNK56587.1    
 GYMC10_2460   Paenibacillus sp. Y412MC10 ACX64738.1 D3E9T1  
 SY83_03070 (fragment)   Paenibacillus swuensis DY6 ANE45470.1    
 D3H65_05380   Paraflavitalea soli 5GH32-13 AXY73442.1    
 D3H65_03550   Paraflavitalea soli 5GH32-13 AXY73100.1    
 I2D83_01565   Pectobacterium aroidearum L6 QPI43361.1    
 EGD00_01505   Pectobacterium carotovorum subsp. carotovorum 67 QDX96126.1    
 PC1_3947   Pectobacterium carotovorum subsp. carotovorum PC1 ACT14962.1    
 ACU03673.1   Pedobacter heparinus DSM 2366 ACU03673.1    
 ACU04851.1   Pedobacter heparinus DSM 2366 ACU04851.1    
 ACU04855.1   Pedobacter heparinus DSM 2366 ACU04855.1    
 G7074_24895   Pedobacter sp. HDW13 QIL42746.1    
 H9N25_10065   Pedobacter sp. SW-16 QNR86692.1    
 PSMK_12810   Phycisphaera mikurensis NBRC 102666 BAM03440.1    
 IPV69_01395   Phycisphaerales bacterium M1803 QOV90056.1    
 IPV69_24315   Phycisphaerales bacterium M1803 QOV89295.1    
 Pla175_04030   Pirellulimonas nuda Pla175 QDU87048.1    
 HED60_11730   Planctomycetales bacterium zrk34 QNN22909.1    
 HED60_08045   Planctomycetales bacterium zrk34 QNN22226.1    
 KS4_34890   Planctomycetes bacterium KS4 QDU35408.1    
 Pan265_03740   Planctomycetes bacterium Pan265 QDU70546.1    
 Pan265_28960   Planctomycetes bacterium Pan265 QDU73018.1    
 Pan265_13210   Planctomycetes bacterium Pan265 QDU71471.1    
 TBK1r_31200   Planctomycetes bacterium TBK1r QDV84175.1    
 JD969_08365   Planctomycetes bacterium ZRK32 QQE13455.1    
 C1N53_00455   Pontibacter sp. SGAir0037 QCR20984.1    
 GM418_02645   Prolixibacteraceae bacterium WC007 QGY42587.1    
 GM418_02660   Prolixibacteraceae bacterium WC007 QGY42590.1    
 PSM36_3151   Proteiniphilum saccharofermentans SCD21940.1    
 HME7025_00777   Pseudarcicella sp. HME7025 AWL08648.1    
 FSB84_07305   Pseudobacter ginsenosidimutans Gsoil 221 QEC41511.1    
 Pedsa_2488   Pseudopedobacter saltans DSM 12145 ADY53033.1    
 Pedsa_3406   Pseudopedobacter saltans DSM 12145 ADY53940.1    
 Pedsa_2492   Pseudopedobacter saltans DSM 12145 ADY53037.1    
 C1I64_03225   Rathayibacter festucae DSM 15932 AZZ51149.1    
 C1O28_08270   Rathayibacter rathayi DSM 7485 AZZ49196.1    
 GXP67_03770   Rhodocytophaga rosea 172606-1 QHT65845.1    
 Runsl_0424   Runella slithyformis DSM 19594 AEI46874.1    
 Runsl_0433   Runella slithyformis DSM 19594 AEI46881.1    
 DR864_23345   Runella sp. HYN0085 AXE20463.1    
 DR864_23320   Runella sp. HYN0085 AXE20458.1    
 DTQ70_02775   Runella sp. SP2 AYQ31164.1    
 HH195_02025   Sarcina sp. JB2 QPJ84754.1    
 L21SP3_01572   Sedimentisphaera cyanobacteriorum L21-RPul-D3 AQQ09760.1    
 STSP1_01417   Sedimentisphaera salicampi ST-PulAB-D4 ARN57023.1    
 shn_23890 (fragment)   Shinella sp. HZN7 ANH07174.1    
 CA265_10165   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS39993.1    
 G8759_17905   Spirosoma aureum BT328 QIP14356.1    
 GJR95_00755   Spirosoma endbachense I-24 QHV93651.1    
 Slin_2455   Spirosoma linguale DSM 74 ADB38475.1 D2QGG7  
 AWR27_08550   Spirosoma montaniterrae DY10 AQG79364.1    
 CWM47_19545   Spirosoma pollinicola HA7 AUD03829.1    
 HH216_10825   Spirosoma sp. CJU-R4 QJD78869.1    
 EXU85_35050   Spirosoma sp. KCTC 42546 QDK83543.1    
 H3H32_29870   Spirosoma sp. PL0136 QMW02098.1    
 HNV11_16790   Spirosoma sp. TS118 QJW90915.1    
 TF3313_1245 (fragment)   Tannerella forsythia 3313 BAR48775.1    
 BFO_1362 (fragment)   Tannerella forsythia 92A2 ATCC 43037 AEW19984.1    
 THTE_2406   Thermogutta terrifontis R1 ASV75008.1    
 SAMN05444156_3206   Verrucomicrobium sp. GAS474 SDU30857.1    
 SAMN05444156_2046   Verrucomicrobium sp. GAS474 SDU11564.1    
 C5Q97_17765   Victivallales bacterium CCUG 44730 AVM46452.1    
 C5Q97_14210   Victivallales bacterium CCUG 44730 AVM45794.1    
 C5Q97_13330   Victivallales bacterium CCUG 44730 AVM45628.1    
 endo-chondroitin lyase (Vvad_PD2953) 4.2.2.- Victivallis vadensis WP_116885688.1
ZP_06241351.1
   
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3D
 A9K55_005460   Cordyceps militaris ATCC 34164 ATY60555.1    
 IBJ81_3374   Cryptococcus gattii VGII R265 KGB77536.1    
 CGB_C5230C   Cryptococcus gattii WM276 ADV21115.1    
 CNAG_01854   Cryptococcus neoformans var. grubii H99 AFR98049.1
AFR98049.2
   
 CKF44_001651   Cryptococcus neoformans var. grubii KN99 AUB28150.1    
 CNC03380   Cryptococcus neoformans var. neoformans JEC21 AAW42359.1    
 DNF11_0927   Malassezia restricta CBS 7877 AYO41877.1    
 MRET_1454   Malassezia restricta KCTC 27527 AXA48966.1    
 MSYG_3333   Malassezia sympodialis ATCC 42132 SHO78984.1    
 BN887_03514   Melanopsichium pennsylvanicum 4 CDI51641.1    
 PODANS_1_18320   Podospora anserina S mat+ CAP67961.1    
 ORF   Podospora anserina S mat+ CDP24220.1    
 RHTO0S_08e08856g   Rhodotorula toruloides CECT1137 CDR43972.1    
 PIIN_01528   Serendipita indica DSM 11827 CCA67701.1    
 PIIN_03024   Serendipita indica DSM 11827 CCA69124.1    
 SRS1_11995   Sporisorium reilianum f. sp. reilianum SRS1_H2-8 SJX60769.1    
 sr11995   Sporisorium reilianum SRZ2 CBQ68130.1    
 SPSC_01971   Sporisorium scitamineum SscI8 CDU23342.1    
 EYB26_007048   Talaromyces marneffei QGA19359.1    
 TRUGW13939_04010 (fragment)   Talaromyces rugulosus W13939 QKX56902.1    
 UBRO_01089   Ustilago bromivora UB2112 SAM59339.1    
 ORF   Xanthophyllomyces dendrorhous CDZ96694.1    
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