Polysaccharide Lyase Family 27

Activities in FamilyL-rhamnose-α-1,4-D-glucuronate lyase (EC 4.2.2.28);
Mechanism b-elimination
3D Structure Status( α / α ) 6 barrel
NoteCreated after Munoz-Munoz et al. (2017) (PMID=28637865) who have shown that the B. thetaiotaomicron BT0263 gene encodes a lyase that removes rhamnose capping in complex arabinogalactan proteins.
Statistics GenBank accession (166); Uniprot accession (3); PDB accession (2); 3D entries (1); cryst (0)
| 1 | 2 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 GCM10025877_13650   Agromyces mangrovi NBRC 112812 BDZ64427.1    
 SAMN04489747_3198   Auraticoccus monumenti MON 2.2 SDE35664.1    
 K6V21_00180   Bacteroides cellulosilyticus BFG-250 UBD69892.1    
 NXW88_00135   Bacteroides cellulosilyticus BFG-371 UVP51415.1    
 INE78_01978   Bacteroides cellulosilyticus CL06T03C01 QUT89995.1    
 L-rhamnose-α-1,4-D-glucuronate lyase (BACCELL_00875) 4.2.2.28 Bacteroides cellulosilyticus DSM 14838 EEF91483.1 E2N9D0 5NO8[A,B]
5NOK[A,B]
 BcellWH2_01635   Bacteroides cellulosilyticus WH2 ALJ58888.1    
 L-rhamnose-α-1,4-D-glucuronate lyase (BACFIN_07013) 4.2.2.28 Bacteroides finegoldii DSM 17565 EEX45220.1 C9KXG7  
 DYI28_08620   Bacteroides ovatus 3725 D1 iv QDM08778.1    
 NXW52_26680   Bacteroides ovatus BFG-464 UVP11093.1    
 NXW19_16085 (fragment)   Bacteroides ovatus BFG-465 UVP75526.1    
 FOC41_00770   Bacteroides ovatus FDAARGOS_733 QGT69587.1    
 RJT06_25395   Bacteroides ovatus H-1813 MDV3119852.1    
 BOVAC1_1912   Bacteroides ovatus VPIC145 CAG9867557.1    
 K6V19_10150   Bacteroides salyersiae BFG-288 UBD14535.1    
 RB604_11110   Bacteroides salyersiae CSP6 WMS08270.1    
 KQP70_01390   Bacteroides salyersiae WAL7960 UYU45192.1    
 KQP71_15650   Bacteroides salyersiae WAL9166 UYU39784.1    
 NXV86_00180   Bacteroides sp. BFG-257 UVO98528.1    
 NQ505_14535   Bacteroides sp. D2 UWN97658.1    
 Btheta7330_03112   Bacteroides thetaiotaomicron 7330 ALJ42648.1    
 NFE52_13970   Bacteroides thetaiotaomicron B2 WWE57005.1    
 NXV79_19055   Bacteroides thetaiotaomicron BFG-109 UVP60106.1    
 NXX00_14665   Bacteroides thetaiotaomicron BFG-116 UVV82812.1    
 NXY23_20050   Bacteroides thetaiotaomicron BFG-119 UVS52733.1    
 NXX57_14110   Bacteroides thetaiotaomicron BFG-129 UVP58532.1    
 NXV61_14900   Bacteroides thetaiotaomicron BFG-130 UVR93831.1    
 NXX60_07980 (fragment)   Bacteroides thetaiotaomicron BFG-148 UVQ23895.1    
 NXX60_07975 (fragment)   Bacteroides thetaiotaomicron BFG-148 UVQ23894.1    
 NXY45_13585   Bacteroides thetaiotaomicron BFG-169 UVP40540.1    
 NXX51_15100   Bacteroides thetaiotaomicron BFG-264 UVS11277.1    
 NXY38_14655   Bacteroides thetaiotaomicron BFG-266 UVV83369.1    
 NXY15_16990 (fragment)   Bacteroides thetaiotaomicron BFG-357 UVV51847.1    
 NXW43_14980 (fragment)   Bacteroides thetaiotaomicron BFG-446 UVO72132.1    
 NXY16_14600   Bacteroides thetaiotaomicron BFG-478 UVS23769.1    
 NXW22_14415   Bacteroides thetaiotaomicron BFG-484 UVP27234.1    
 NXV46_14100   Bacteroides thetaiotaomicron BFG-498 UVQ44284.1    
 NXY28_07410 (fragment)   Bacteroides thetaiotaomicron BFG-505 UVV60166.1    
 NXW82_22020   Bacteroides thetaiotaomicron BFG-510 UVQ29664.1    
 K6V27_13825   Bacteroides thetaiotaomicron BFG-55 UBD14334.1    
 NXX83_15840   Bacteroides thetaiotaomicron BFG-576 UVQ68036.1    
 INE82_01326   Bacteroides thetaiotaomicron CL06T03C18 QUT70555.1    
 INE89_05350   Bacteroides thetaiotaomicron CL11T00C24 QUT43116.1    
 KHO74_00260   Bacteroides thetaiotaomicron CL15T119C52 QZU84310.1    
 KHO73_00263   Bacteroides thetaiotaomicron CL15T12C11 QZU78897.1    
 V3C11_22175   Bacteroides thetaiotaomicron DFI.6.40 WVP66483.1    
 FE838_15335   Bacteroides thetaiotaomicron DSM 2079 QMW89287.1    
 BatF92_15180   Bacteroides thetaiotaomicron F9-2 BCA49576.1    
 I6G92_16280   Bacteroides thetaiotaomicron FDAARGOS_935 QQA10714.1    
 RJT07_00625   Bacteroides thetaiotaomicron H-2209 WOG22020.1    
 MJ393_14595   Bacteroides thetaiotaomicron VPI 5482 UML59725.1    
 KQP69_22270   Bacteroides thetaiotaomicron VPI-2808B UYV00301.1    
 KQP56_07915   Bacteroides thetaiotaomicron VPI-3164 UYU97422.1    
 KQP74_09320   Bacteroides thetaiotaomicron VPI-3443 UYU93432.1    
 L-rhamnose-α-1,4-D-glucuronate lyase (BT0263; BT_0263) 4.2.2.28 Bacteroides thetaiotaomicron VPI-5482 AAO75370.1 Q8AB48  
 KP721_14130   Bacteroides thetaiotaomicron VPI-5482A UYU84346.1    
 KQP77_18855   Bacteroides thetaiotaomicron VPI-BT7853 UYU80522.1    
 KQP72_08735   Bacteroides thetaiotaomicron VPI-BT8702 UYU78133.1    
 KQP59_10000   Bacteroides thetaiotaomicron VPI-BTDOT2 UYU73418.1    
 KQP68_13945   Bacteroides thetaiotaomicron WAL8669 UYU64687.1    
 KQP65_18360   Bacteroides thetaiotaomicron WAL8713 UYU60384.1    
 NQ510_17155   Bacteroides uniformis ATCC 8492 UWO07075.1    
 INE83_03910   Bacteroides uniformis CL06T03C05 QUT68406.1    
 INE84_02512   Bacteroides uniformis CL06T06C18 QUT62818.1    
 I6G58_06495   Bacteroides uniformis FDAARGOS_901 QQA31236.1    
 QWU49_17445   Bacteroides uniformis JCM5828 WNG09225.1    
 BB017W439_0372   Bifidobacterium breve 017W439 AUD94693.1    
 BB180W83_0373   Bifidobacterium breve 180W83 AUE00517.1    
 HMPREF9228_0390   Bifidobacterium breve ACS-071-V-Sch8b AEF26984.1    
 DRBB28_0532   Bifidobacterium breve DRBB28 AUD92738.1    
 AH68_02640   Bifidobacterium catenulatum PV20-2 AIZ14123.1    
 BLI708_02395   Bifidobacterium imperatoris JCM 32708 QSY58754.1    
 V3C15_01735   Bifidobacterium longum DFI.7.60 WVP52464.1    
 BLD_1057   Bifidobacterium longum DJO10A ACD98503.1    
 JQN89_07595   Bifidobacterium longum HN001 QRI55828.1    
 J7M33_01875   Bifidobacterium longum K15 QTL76110.2
QTL76110.1
   
 J7M31_01875   Bifidobacterium longum K5 QTL68968.2
QTL68968.1
   
 Blon_0378   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 ACJ51499.1    
 BLIJ_0386   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 BAJ67980.1    
 HUE60_01875   Bifidobacterium longum subsp. infantis BB-02 UPT08259.1    
 NUU11_02125   Bifidobacterium longum subsp. infantis BB-02 UUY28657.1    
 KDJ92_00765   Bifidobacterium longum subsp. infantis BINF QUF86880.1    
 BLI009_04385   Bifidobacterium longum subsp. infantis JCM 7009 QSP98351.1    
 BLI010_05120   Bifidobacterium longum subsp. infantis JCM 7010 QTB93876.1    
 BLI011_04350   Bifidobacterium longum subsp. infantis JCM 7011 QSZ18600.1    
 MT990_01970   Bifidobacterium longum subsp. infantis JRPT UOG11172.1    
 NCTC11817_00391   Bifidobacterium longum subsp. infantis NCTC11817 VEG40286.1    
 BCBL_0315   Bifidobacterium longum subsp. longum BCBL-583 UAU37206.1    
 BIL_15690   Bifidobacterium longum subsp. longum F8 CBK71019.1    
 BSD967_07365   Bifidobacterium saguini DSMZ 23967 QTB90170.1    
 bpr_III172   Butyrivibrio proteoclasticus B316 ADL35858.1    
 Caci_6901   Catenulispora acidiphila DSM 44928 ACU75738.1    
 GC089_06505   Cellulomonas sp. JZ18 QGQ18952.1    
 QNM32_04960   Chitinophagaceae bacterium DXS WJK48536.1    
 JNO48_04125   Clostridiales bacterium XBB3002 QTE69095.1    
 J4772_04580 (fragment)   Cohnella sp. LGH QTH43707.1    
 J2O08_15245   Elizabethkingia anophelis 2-14 UTF92543.1    
 KUF66_16105   Elizabethkingia anophelis 2002C02-176 UKY82527.1    
 KUF67_16065   Elizabethkingia anophelis 2008N07-201 UKY93162.1    
 EAVNVH72_03206   Elizabethkingia anophelis EAV_NVH72 CAI9685952.1    
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