Polysaccharide Lyase Family 27

Activities in FamilyL-rhamnose-α-1,4-D-glucuronate lyase (EC 4.2.2.-)
Mechanism b-elimination
3D Structure Status( α / α ) 6 barrel
NoteCreated after Munoz-Munoz et al. (2017) (PMID=28637865) who have shown that the B. thetaiotaomicron BT0263 gene encodes a lyase that removes rhamnose capping in complex arabinogalactan proteins.
Statistics GenBank accession (51); Uniprot accession (0); PDB accession (2); 3D entries (1); cryst (0)
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 SAMN04489747_3198   Auraticoccus monumenti MON 2.2 SDE35664.1    
 L-rhamnose-α-1,4-D-glucuronate lyase (BACCELL_00875) 4.2.2.- Bacteroides cellulosilyticus DSM 14838 EEF91483.1   5NO8[A,B]
5NOK[A,B]
 BcellWH2_01635   Bacteroides cellulosilyticus WH2 ALJ58888.1    
 L-rhamnose-α-1,4-D-glucuronate lyase (BACFIN_07013) 4.2.2.- Bacteroides finegoldii DSM 17565 EEX45220.1    
 DYI28_08620   Bacteroides ovatus 3725 D1 iv QDM08778.1    
 FOC41_00770   Bacteroides ovatus FDAARGOS_733 QGT69587.1    
 Btheta7330_03112   Bacteroides thetaiotaomicron 7330 ALJ42648.1    
 FE838_15335   Bacteroides thetaiotaomicron DSM 2079 QMW89287.1    
 BatF92_15180   Bacteroides thetaiotaomicron F9-2 BCA49576.1    
 L-rhamnose-α-1,4-D-glucuronate lyase (BT0263;BT_0263) 4.2.2.- Bacteroides thetaiotaomicron VPI-5482 AAO75370.1    
 BVU_2155   Bacteroides vulgatus ATCC 8482 ABR39816.1    
 BVU_2438   Bacteroides vulgatus ATCC 8482 ABR40096.1    
 BB017W439_0372   Bifidobacterium breve 017W439 AUD94693.1    
 BB180W83_0373   Bifidobacterium breve 180W83 AUE00517.1    
 HMPREF9228_0390   Bifidobacterium breve ACS-071-V-Sch8b AEF26984.1    
 DRBB28_0532   Bifidobacterium breve DRBB28 AUD92738.1    
 AH68_02640   Bifidobacterium kashiwanohense PV20-2 AIZ14123.1    
 BLD_1057   Bifidobacterium longum DJO10A ACD98503.1    
 Blon_0378   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 ACJ51499.1    
 BLIJ_0386   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 BAJ67980.1    
 NCTC11817_00391   Bifidobacterium longum subsp. infantis NCTC11817 VEG40286.1    
 BIL_15690   Bifidobacterium longum subsp. longum F8 CBK71019.1    
 bpr_III172   Butyrivibrio proteoclasticus B316 ADL35858.1    
 Caci_6901   Catenulispora acidiphila DSM 44928 ACU75738.1    
 GC089_06505   Cellulomonas sp. JZ18 QGQ18952.1    
 JUNP353_3190   Elizabethkingia anophelis JUNP 353 BBQ08619.1    
 BD94_1341   Elizabethkingia anophelis NUHP1 AIL45116.1    
 FFWV33_15130   Flavobacterium faecale WV33 AWG22764.1    
 Kfla_5024   Kribbella flavida DSM 17836 ADB34040.1    
 F1D05_07470   Kribbella qitaiheensis SPB151 QNE17777.1    
 D1010_14260   Lactobacillus harbinensis M1 QFR24440.1    
 FMM01_08640 (fragment)   Lactobacillus harbinensis NSMJ42 QEU47356.1    
 FMM01_08635 (fragment)   Lactobacillus harbinensis NSMJ42 QEU47355.1    
 H3M12_01550   Lactobacillus suantsaii CBA3634 QMU08389.1    
 FOE78_08605   Microlunatus sp. KUDC0627 QDP95951.1    
 BvMPK_2075   Bacteroides vulgatus mpk ALK84676.1    
 VIC01_03129   Bacteroides vulgatus VIC01 QEW37539.1    
 G7070_17215   Propioniciclava sp. HDW11 QIK74048.1    
 DF19_29185   Streptomyces olindensis DAUFPE 5622 KDN79481.1    
 DLM49_03970   Streptomyces sp. WAC 01438 AZM64369.1    
 TREAZ_2144   Treponema azotonutricium ZAS-9 AEF81787.1    
 Tpau_0506   Tsukamurella paurometabola DSM 20162 ADG77147.1    
 C5Q97_02025   Victivallales bacterium CCUG 44730 AVM43539.1    
 C5Q97_10665   Victivallales bacterium CCUG 44730 AVM45135.1    
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