Polysaccharide Lyase Family 21

Activities in FamilyAcharan-sulfate lyase (EC 4.2.2.-);
Heparin lyase / heparin lyase I (EC 4.2.2.7);
Heparin-sulfate lyase / heparin lyase III (EC 4.2.2.8);
Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
Noteheparin lyase II enzymes have simultaneously heparin lyase (heparin lyase I) and heparin-sulfate lyase (heparin lyase III) activity ; distantly related to family PL15;
Statistics GenBank accession (86); Uniprot accession (3); PDB accession (4); 3D entries (1); cryst (0)
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 K6V21_03760   Bacteroides cellulosilyticus BFG-250 UBD70553.1     1
 INE88_00172 (Hepb_1)   Bacteroides eggerthii CL11T00C20 QUT43394.1     1
 INE88_01975 (Hepb_2)   Bacteroides eggerthii CL11T00C20 QUT45167.1     1
 BACEGG_03043   Bacteroides eggerthii DSM 20697 EEC52694.1     1
 BACEGG_01675   Bacteroides eggerthii DSM 20697 EEC53920.1     1
 NQ546_01620   Bacteroides eggerthii DSM 20697 UWN88202.1     1
 NQ546_09805   Bacteroides eggerthii DSM 20697 UWN86490.1     1
 I6J51_03865   Bacteroides eggerthii FDAARGOS_1221 QRQ49457.1     1
 I6J51_12960   Bacteroides eggerthii FDAARGOS_1221 QRQ47959.1     1
 DXK01_003325   Bacteroides intestinalis APC919/174 QDO68011.1     1
 I1225_03325   Bacteroides intestinalis APC919/174 substr. 8T UCB36242.1     1
 I1224_03325   Bacteroides intestinalis APC919/174 substr. 8W UCB40484.1     1
 BACINT_00904   Bacteroides intestinalis DSM 17393 EDV07336.1     1
 NXV86_03940   Bacteroides sp. BFG-257 UVO99181.1     1
 BACSTE_00262 (29453)   Bacteroides stercoris ATCC 43183 EDS16730.1     1
 NQ565_09625   Bacteroides stercoris ATCC 43183 UWO02567.1     1
 NQ565_02280   Bacteroides stercoris ATCC 43183 UWO04326.1     1
 K6V31_09835   Bacteroides stercoris BFG-121 UBE40134.1     1
 K6V31_04695   Bacteroides stercoris BFG-121 UBE42148.1     1
 acharan sulfate lyase 1/2 / heparin lyase II / heparanase II (AlsI;Als2;HepII) 4.2.2.- Bacteroides stercoris HJ-15 ACN29695.1 C0JBW5   1
 LA756_03965   Bremerella volcania TYQ1 UBM37053.1    
 PZB72_26845   Catalinimonas niigatensis NBRC 109829 WPP50288.1    
 DLD77_02480   Chitinophaga alhagiae T22 AWO00644.1    
 HF324_21110   Chitinophaga oryzae 1303 QJB40222.1    
 HF329_21215   Chitinophaga sp. 1310 QJB33697.1    
 Cop2CBH44_22940   Coprobacter secundus subsp. similis 2CBH44 BCI63941.1    
 Cop2CBH44_22930   Coprobacter secundus subsp. similis 2CBH44 BCI63940.1    
 E1750_01135   Flavobacterium nackdongense GS13 QBN17458.1    
 D9M09_15575   Janthinobacterium agaricidamnosum BHSEK AYM77060.1    
 JAB4_036350 (HepB)   Janthinobacterium sp. HH102 QOU74174.1    
 OPV09_18390   Janthinobacterium sp. TB1-E2 WWO44687.1    
 FJQ89_08050   Janthinobacterium tructae ASO4wet QDG70382.1    
 HPQ68_09510   Massilia sp. erpn UTY57410.1    
 MJ904_05270   Massilia sp. MB5 UMR31626.1    
 ACZ75_20320   Massilia sp. NR 4-1 AKU23452.1    
 Niako_3778   Niastella koreensis GR20-10 AEW00072.1    
 Back11_14860   Paenibacillus baekrokdamisoli KCTC 33723 BBH20141.1    
 Back11_01560   Paenibacillus baekrokdamisoli KCTC 33723 BBH18811.1    
 SK3146_03003 (Hepb_1)   Paenibacillus konkukensis SK3146 UQZ83796.1    
 SK3146_03009 (Hepb_2)   Paenibacillus konkukensis SK3146 UQZ83802.1    
 DVH26_33100   Paenibacillus sp. H1-7 ULL18851.1    
 DVH26_33125   Paenibacillus sp. H1-7 ULL18856.1    
 LOZ80_08450   Paenibacillus sp. HWE-109 UKS28941.1    
 LOZ80_11520   Paenibacillus sp. HWE-109 UKS29520.1    
 LOZ80_11390   Paenibacillus sp. HWE-109 UKS29495.1    
 LOZ80_11395   Paenibacillus sp. HWE-109 UKS29496.1    
 LOZ80_18900   Paenibacillus sp. HWE-109 UKS30893.1    
 H7F31_04515   Paenibacillus sp. PAMC21692 QNK58213.1     1
 heparin lyase II / heparinase II (HepB;Phep_2408) 4.2.2.7
4.2.2.8
Pedobacter heparinus DSM 2366 ACU04612.1
AAB18277.1
ABJ17170.1
ACW20418.1
C6XZB6
Q46080
2FUQ[A,B]
2FUT[A,B]
3E7J[A,B]
3E80[A,B,C]
1
 OVA16_12710   Pedobacter sp. SL55 WAC39453.1    
 PEIBARAKI_2967   Petrimonas sp. IBARAKI BBA16840.1
BBD46975.1
   
 PSM36_0316   Proteiniphilum saccharofermentans SCD19150.1    
 PSM36_0313   Proteiniphilum saccharofermentans SCD19147.1    
 C9I28_13245   Pseudoduganella armeniaca ZMN-3 AVR96552.1    
 C9I28_07685   Pseudoduganella armeniaca ZMN-3 AVR95624.1    
 Pedsa_0684   Pseudopedobacter saltans DSM 12145 ADY51260.1    
 K0V07_03140   Ruficoccus sp. ZRK36 QYY36471.1    
 QC826_22770   Rugamonas sp. DEMB1 WGG49376.1     1
 HS960_11945   Sphingobacterium multivorum BIGb0170 QMV68329.1    
 I6I98_15290   Sphingobacterium multivorum FDAARGOS_1141 QQT51656.1    
 I6I99_07685   Sphingobacterium multivorum FDAARGOS_1142 QQT32425.1    
 I6J00_00060   Sphingobacterium multivorum FDAARGOS_1143 QQT45124.1    
 E2P86_07370   Sphingobacterium psychroaquaticum SJ-25 QBQ40978.1    
 K2F45_09310   Sphingobacterium siyangense FTD2 UQA77150.1    
 JVX97_22245   Sphingobacterium siyangense PDNC006 QRY56707.1    
 BV902_10600   Sphingobacterium sp. B29 APU96737.1    
 QYC40_17025   Sphingobacterium sp. BN32 WKK58335.1    
 GFH32_16870   Sphingobacterium sp. dk4302 QGA27893.1    
 GFH32_16800   Sphingobacterium sp. dk4302 QGA28294.1    
 G6053_20175   Sphingobacterium sp. DR205 QIH35070.1    
 OGI71_01830   Sphingobacterium sp. ML3W WFA80032.1    
 OK025_25265   Sphingobacterium sp. UGAL515B_05 WON94540.1    
 I6J01_21600   Sphingobacterium spiritivorum FDAARGOS_1144 QQT38071.1    
 I6J02_21185   Sphingobacterium spiritivorum FDAARGOS_1145 QQT26180.1    
 I6J03_00395   Sphingobacterium spiritivorum FDAARGOS_1146 QQS98221.1    
 U0038_13545   Sphingobacterium spiritivorum HAMBI_1896 WQD32536.1    
 NCTC11429_03410   Sphingobacterium thalpophilum NCTC11429 VTR46709.1    
 GJR95_37505   Spirosoma endbachense I-24 QHW00380.1    
 P0M28_18290   Tunicatimonas pelagia NBRC 107804 WKN40986.1    
 P0M28_23265   Tunicatimonas pelagia NBRC 107804 WKN41965.1    
 K4G66_20180   Tunicatimonas sp. TK19036 WKN34695.1    
 VvadDRAFT_0838   Victivallis vadensis ATCC BAA-548 EDM94615.1    
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