Polysaccharide Lyase Family 1

Activities in Familypectate lyase (EC 4.2.2.2); exo-pectate lyase (EC 4.2.2.9); pectin lyase (EC 4.2.2.10).
3D Structure Statusparallel β-helix
External resourcesCAZypedia; HOMSTRAD;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (6001); Uniprot accession (587); PDB accession (42); 3D entries (14); cryst (1)
All (2545) Archaea (17) Bacteria (1934) Eukaryota (552) Viruses (18) unclassified (24) Structure (14 - 1 cryst) Characterized (106)
| 1 | ... | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ... | 20 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 CYFUS_005269   Cystobacter fuscus DSM 52655 ATB39821.1    
 CHU_1162   Cytophaga hutchinsonii ATCC 33406 ABG58437.1 Q11VX9  
 SAMN06298216_1602   Cytophagales bacterium TFI 002 SOE21130.1     2
 SAMN06298216_1601   Cytophagales bacterium TFI 002 SOE21129.1     2
 pectate lyase D (PelD) 4.2.2.2 Dickeya chrysanthemi B374 CAA35176.1
CAW40922.1
CAW46080.1
CAW49284.1
CAW50991.1
CAW61549.1
CAW62452.1
CAW70715.1
CAW71340.1
CAW73820.1
CAW79797.1
CAW89321.1
CAW91256.1
CAW91914.1
CAW96012.1
CAW96233.1
CAW97079.1
CAX02156.1
CAX06726.1
CAX07080.1
CAX07583.1
CBC11582.1
CBC98484.1
P18209   6
 pectate lyase E (PelE) 4.2.2.2 Dickeya chrysanthemi B374 CAA35175.1
CAW40924.1
CAW46082.1
CAW49286.1
CAW50993.1
CAW61551.1
CAW62454.1
CAW70717.1
CAW71342.1
CAW73822.1
CAW79799.1
CAW89327.1
CAW91260.1
CAW91918.1
CAW96014.1
CAW96235.1
CAW97081.1
CAX02158.1
CAX06728.1
CAX07082.1
CAX07585.1
CBC11584.1
CBC98488.1
P0C1A4
P18210
  6
 pectate lyase (PelA) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24843.1
CAW40921.1
CAW46079.1
CAW49283.1
CAW50990.1
CAW61547.1
CAW62451.1
CAW70713.1
CAW71339.1
CAW73819.1
CAW79796.1
CAW89319.1
CAW91254.1
CAW91911.1
CAW96011.1
CAW96232.1
CAW97078.1
CAX02155.1
CAX06725.1
CAX07079.1
CAX07582.1
CBC11581.1
CBC98482.1
P0C1A2
P29155
1JRG[A,B]
1JTA[A]
1OOC[A,B]
1PE9[A,B]
6
 pectate lyase (PelB;PlB) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24847.1 P04959   3
 pectate lyase (PelC) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24849.1
AAR45490.1
AAW11900.1
P11073 1AIR[A]
1O88[A]
1O8D[A]
1O8E[A]
1O8F[A]
1O8G[A]
1O8H[A]
1O8I[A]
1O8J[A]
1O8K[A]
1O8L[A]
1O8M[A]
1PLU[A]
2EWE[A]
2PEC[A]
3
 pectate lyase (PelE) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24844.1
CAW40923.1
CAW46081.1
CAW49285.1
CAW50992.1
CAW61550.1
CAW62453.1
CAW70716.1
CAW71341.1
CAW73821.1
CAW79798.1
CAW89324.1
CAW91258.1
CAW91916.1
CAW96013.1
CAW96234.1
CAW97080.1
CAX02157.1
CAX06727.1
CAX07081.1
CAX07584.1
CBC11583.1
CBC98486.1
P04960 1PCL[A] 6
 Dd1591_0270   Dickeya chrysanthemi Ech1591 ACT05162.1 C6CH50   3
 Dd1591_1089   Dickeya chrysanthemi Ech1591 ACT05961.1 C6CNP1   6
 Dd1591_0271   Dickeya chrysanthemi Ech1591 ACT05163.1 C6CH51   3
 Dd1591_0269   Dickeya chrysanthemi Ech1591 ACT05161.1 C6CH49   2
 Dd1591_1091   Dickeya chrysanthemi Ech1591 ACT05963.1 C6CNP3   6
 Dd1591_1090   Dickeya chrysanthemi Ech1591 ACT05962.1 C6CNP2   6
 Dd1591_3306 (possible fragment)   Dickeya chrysanthemi Ech1591 ACT08124.1 C6CIM6   8
 pectate lyase E (PelE)   Dickeya chrysanthemi S3-1 AKU19317.1     6
 pectate lyase Z (PelZ)   Dickeya chrysanthemi S3-1 AAX70924.1 Q4KSH8   2
 pectate lyase D (PelD;PLd;Dda3937_03372) 4.2.2.2 Dickeya dadantii 3937 ADM99552.1
CAA10570.1
CAW40891.1
CAW46049.1
CAW49253.1
CAW50960.1
CAW61511.1
CAW62421.1
CAW70677.1
CAW71309.1
CAW73789.1
CAW79766.1
CAW89250.1
CAW91190.1
CAW91860.1
CAW95981.1
CAW96202.1
CAW97048.1
CAX02125.1
CAX06695.1
CAX07049.1
CAX07552.1
CBC11551.1
CBC98428.1
E0SAZ3
Q9Z4J4
  6
 pectate lyase Z (PelZ;Dda3937_04191) 4.2.2.2 Dickeya dadantii 3937 ADN00347.1
CAA65785.1
E0SJQ8
P94773
  2
 pectate lyase C (PelC;PLc;Dda3937_04192) 4.2.2.2 Dickeya dadantii 3937 ADN00346.1
CAA10642.1
CAA47822.1
E0SJQ7
Q59420
Q79AJ0
  3
 pectate lyase E (PelE;PLe;Dda3937_03371) 4.2.2.2 Dickeya dadantii 3937 ADM99551.1
AAA24854.1
P0C1A5   6
 Dda3937_03551   Dickeya dadantii 3937 ADM96804.1 E0SKU1   8
 Dda3937_04108 (PnlH) (possible fragment)   Dickeya dadantii 3937 ADM98893.1 E0SG38  
 pectate lyase A (PelA;Dda3937_03370) 4.2.2.2 Dickeya dadantii 3937 ADM99550.1
AAA24846.1
P0C1A3   6
 pectate lyase B (PelB;Dda3937_04193) 4.2.2.2 Dickeya dadantii 3937 ADN00345.1
CAA47821.1
S25262
E0SJQ6
Q59419
  3
 Dd703_0351   Dickeya paradisiaca Ech703 ACS84165.1 C6C820   2
 Dd703_0353   Dickeya paradisiaca Ech703 ACS84167.1 C6C822   3
 Dd703_2763   Dickeya paradisiaca Ech703 ACS86540.1 C6CAP2   6
 Dd703_3378   Dickeya paradisiaca Ech703 ACS87140.1 C6CE46   8
 Dd703_0352   Dickeya paradisiaca Ech703 ACS84166.1 C6C821   3
 Dd703_2764   Dickeya paradisiaca Ech703 ACS86541.1 C6CAP3   6
 A4U42_07085   Dickeya solani IPO 2222 ANE75116.1     3
 A4U42_07090   Dickeya solani IPO 2222 ANE75117.1     2
 A4U42_12055   Dickeya solani IPO 2222 ANE76004.1     8
 A4U42_03250   Dickeya solani IPO 2222 ANE74434.1     6
 A4U42_03245   Dickeya solani IPO 2222 ANE74433.1     6
 A4U42_07080   Dickeya solani IPO 2222 ANE75115.1     3
 A4U42_03255   Dickeya solani IPO 2222 ANE74435.1     6
 pectate lyase   Dickeya sp. DCE-01 AGC13164.1     3
 pectate lyase   Dickeya sp. DCE-01 AGC13165.1     3
 pectate lyase   Dickeya sp. DCE-01 AHL89023.1     2
 pectate lyase   Dickeya sp. DCE-01 AHL89021.1     6
 pectate lyase, partial (fragment)   Dickeya sp. DCE-01 AHL89029.1     8
 W909_02890   Dickeya zeae EC1 AJC65107.1     8
 W909_14860   Dickeya zeae EC1 AJC67288.1     6
 W909_14870   Dickeya zeae EC1 AJC67289.1     6
 W909_14875   Dickeya zeae EC1 AJC67290.1     6
 W909_18430   Dickeya zeae EC1 AJC67946.1     3
 W909_18435   Dickeya zeae EC1 AJC67947.1     3
 W909_18440   Dickeya zeae EC1 AJC67948.1     2
 Dd586_3085   Dickeya zeae Ech586 ACZ77920.1 D2BU73   6
 Dd586_3790   Dickeya zeae Ech586 ACZ78620.1 D2BY28   2
 Dd586_3788   Dickeya zeae Ech586 ACZ78618.1 D2BY26   3
 Dd586_3083   Dickeya zeae Ech586 ACZ77918.1 D2BU71   6
 Dd586_3084   Dickeya zeae Ech586 ACZ77919.1 D2BU72   6
 Dd586_3789   Dickeya zeae Ech586 ACZ78619.1 D2BY27   3
 pectate lyase, partial (fragment)   Dickeya zeae M-13 APM87151.1    
 pectate lyase, partial (fragment)   Dickeya zeae M-7 APM87152.1    
 DICTH_0315   Dictyoglomus thermophilum H-6-12 ACI19128.1 B5YCE0  
 Dtur_0430   Dictyoglomus turgidum DSM 6724 ACK41732.1 B8E1U9  
 Dtur_0435   Dictyoglomus turgidum DSM 6724 ACK41737.1 B8E1V4  
 Dtur_0431   Dictyoglomus turgidum DSM 6724 ACK41733.1 B8E1V0   5
 FH5T_00810   Draconibacterium orientale FH5 AHW58599.1     2
 FH5T_00840   Draconibacterium orientale FH5 AHW58605.1     2
 Dfer_2151   Dyadobacter fermentans DSM 18053 ACT93374.1 C6VYL9   2
 Echvi_0934   Echinicola vietnamensis DSM 17526 AGA77207.1     2
 Echvi_1326   Echinicola vietnamensis DSM 17526 AGA77597.1     2
 Echvi_2701   Echinicola vietnamensis DSM 17526 AGA78941.1     2
 Echvi_3086   Echinicola vietnamensis DSM 17526 AGA79324.1     2
 Echvi_3090   Echinicola vietnamensis DSM 17526 AGA79328.1     2
 Echvi_3397   Echinicola vietnamensis DSM 17526 AGA79617.1     2
 Echvi_3939   Echinicola vietnamensis DSM 17526 AGA80149.1     2
 Echvi_3943   Echinicola vietnamensis DSM 17526 AGA80153.1     2
 Echvi_3403   Echinicola vietnamensis DSM 17526 AGA79623.1     2
 FA04_25010   Ensifer adhaerens Casida A ANK76448.1    
 OV14_b1360 (fragment)   Ensifer adhaerens OV14 AHK47517.1    
 EAM_2780 (Eop2)   Erwinia amylovora ATCC 49946 CBJ47454.1 D4IAA6   8
 EAIL5_0684 (Eop2)   Erwinia amylovora ATCC BAA-2158 CBX79504.1 E5B203   8
 EAMY_0653 (Eop2)   Erwinia amylovora CFBP1430 CBA19603.1 D4HWC7   8
 Eop2   Erwinia amylovora EA273 ABM65603.1 A2I5X6   8
 pectate lyase   Erwinia sp. BTC105 ABF59812.1 Q1G403   3
 CP97_06025   Erythrobacter atlanticus s21-N3 AKQ41677.1    
 CP97_06085   Erythrobacter atlanticus s21-N3 AKQ43218.2    
 EUBELI_00125   [Eubacterium] eligens ATCC 27750 ACR71161.1 C4Z1X1  
 EUBELI_01249   [Eubacterium] eligens ATCC 27750 ACR72246.1 C4Z0Y3  
 EUBELI_01250   [Eubacterium] eligens ATCC 27750 ACR72247.1 C4Z0Y4  
 Fbal_2912   Ferrimonas balearica DSM 9799 ADN77114.1 E1SSW0  
 Fbal_2913   Ferrimonas balearica DSM 9799 ADN77115.1 E1SSW1  
 Fbal_2914   Ferrimonas balearica DSM 9799 ADN77116.1 E1SSW2  
 FAES_3719   Fibrella aestuarina BUZ 2 CCH01726.1     2
 Fisuc_0174 / FSU_0577   Fibrobacter succinogenes subsp. succinogenes S85 ACX73788.1
ADL26594.1
C9RJS5  
 Fisuc_1991 / FSU_2514   Fibrobacter succinogenes subsp. succinogenes S85 ACX75579.1
ADL24590.1
C9RIV8  
 Fisuc_2002 / FSU_2525   Fibrobacter succinogenes subsp. succinogenes S85 ACX75590.1
ADL27263.1
C9RIW9   2
 Fisuc_2363 / FSU_2913   Fibrobacter succinogenes subsp. succinogenes S85 ACX75949.1 C9RL01  
 Fisuc_2565 / FSU_3135   Fibrobacter succinogenes subsp. succinogenes S85 ACX76150.1
ADL26030.1
C9RMB8  
 Fisuc_2012 / FSU_2535   Fibrobacter succinogenes subsp. succinogenes S85 ACX75599.1
ADL25054.1
C9RJ82  
 Fisuc_2481   Fibrobacter succinogenes subsp. succinogenes S85 ACX76067.1 C9RLQ2  
 FLA_2712   Filimonas lacunae NBRC 104114 BAV06693.1    
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