| Activities in Family | alginate lyase (EC 4.2.2.3); oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26); heparin lyase / heparin lyase I (EC 4.2.2.7); heparin-sulfate lyase / heparin lyase III (EC 4.2.2.8) |
|---|---|
| Mechanism | b-elimination |
| 3D Structure Status | ( α / α ) 6 toroid + anti-parallel β-sheet |
| External resources | CAZypedia; |
| Statistics | GenBank accession (436); Uniprot accession (7); PDB accession (4); 3D entries (2); cryst (0) |
| Bacteria | |||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf |
| exotype alginate lyase (Atu3025) | 4.2.2.26 | pubmed |
Agrobacterium fabrum str. C58 | AAL43841.1 AAK90358.1 NP_357573.1 NP_533525.1 |
A9CEJ9 | 3A0O[A,B] 3AFL[A] |
1 |
| reducing-end specific exo-heparin lyase (BCexoHep; BcellWH2_01709; BACWH2_1592; HepB) | 4.2.2.- | pubmed |
Bacteroides cellulosilyticus WH2 | ALJ58962.1 | A0A0P0GDH6 | 2 | |
| reducing-end specific exo-heparin lyase (BFexoHep; BACFIN_07946) | 4.2.2.- | Bacteroides finegoldii DSM 17565 | EEX44367.1 | 2 | |||
| reducing-end specific exo-heparin lyase (BIexoHep; BACINT_00178) | 4.2.2.- | pubmed |
Bacteroides intestinalis DSM 17393 | WP_007659809.1 EDV07780.1 |
B3C5J6 | 6LJA[A] 6LJL[A] |
2 |
| reducing-end specific exo-heparin lyase (BTexoHep; Hep II; BT4652) | 4.2.2.- | pubmed |
Bacteroides thetaiotaomicron VPI-5482 | AAO79757.1 | Q89YS9 | 2 | |
| reducing-end specific exo-heparin lyase (PAexoHep) | 4.2.2.- | pubmed |
Pedobacter arcticus | WP_026063245.1 | 2 | ||
| alginate lyase (A1-IV') | 4.2.2.3 | pubmed |
Sphingomonas sp. A1 | BAD90006.1 | Q5DWP2 | ||
| oligo alginate lyase (A1-IV;Oal) | 4.2.2.26 | pubmed |
Sphingomonas sp. A1 | BAB03319.1 | Q9KWT4 | 1 | |
| oligoalginate lyase (polyG-/polyM-specific) (OalA;V12B01_24239) | 4.2.2.26 | pubmed |
Vibrio splendidus 12B01 | EAP93067.1 | A3UWR0 | 1 | |
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