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Enzyme Classes
Associated Modules
Genomes
Glycoside Hydrolases
GlycosylTransferases
Polysaccharide Lyases
Carbohydrate Esterases
Carbohydrate-Binding Modules
Foreword
Archaea
Bacteria
Eukaryota
Viruses
PL1
PL2
PL3
PL4
PL5
PL6
PL7
PL8
PL9
PL10
PL11
PL12
PL13
PL14
PL15
PL16
PL17
PL18
PL19
PL20
PL21
PL22
NC
Family
Tax_id
Organism name
Protein name
GenBank accession
Uniprot accession
PDB accession
EC number
Known activities
Mechanisms
Clan
Site
Polysaccharide Lyase Family 14
Known Activities
alginate lyase (EC
4.2.2.3
); exo-oligoalginate lyase (EC
4.2.2.-
); β-1,4-glucuronan lyase (EC
4.2.2.14
)
Statistics
GenBank accession (62); Uniprot accession (40); PDB accession (3); 3D entries (1); cryst (0)
Summary
All
(56)
Bacteria
(20)
Eukaryota
(19)
Viruses
(17)
Structure
(1 )
Characterized
(6)
Subfamilies
(28)
Bacteria
Protein Name
EC#
Organism
GenBank
Uniprot
PDB/3D
Subf
ebA4287
Aromatoleum aromaticum EbN1
CAI08551.1
Q5P2B3
azo3264
Azoarcus sp. BH72
CAL95880.1
A1KAM4
Cpin_0333
Chitinophaga pinensis DSM 2588
ACU57832.1
C7PEL0
CHU_2148
Cytophaga hutchinsonii ATCC 33406
ABG59411.1
Q11T53
Fisuc_0498 / FSU_0916
Fibrobacter succinogenes subsp. succinogenes S85
ACX74110.1
ADL24572.1
C9RLG3
Franean1_6673
Frankia sp. EAN1pec
ABW16010.1
A8KZN0
Franean1_7279
Frankia sp. EAN1pec
ABW16598.1
A8L7N3
FraEuI1c_0163
Frankia sp. EuI1c
ADP78251.1
E3J4T2
3
FsymDg_0652
Frankia symbiont of Datisca glomerata 4085684
AEH08177.1
Hoch_1714
Haliangium ochraceum DSM 14365
ACY14264.1
D0LX17
ORF
Klebsiella pneumoniae NTUH-K9534
BAF47002.1
BAI43763.1
A2V7S2
ORF
Klebsiella pneumoniae subsp. ozaenae KAUFFMANN E5051
BAF46986.1
A2V7Q6
Ndas_5472
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
ADH70851.1
D7B9J3
Oter_2484
Opitutus terrae PB90-1
ACB75766.1
B1ZSX7
Pedsa_1495
Pedobacter saltans DSM 12145
ADY52056.1
Pedsa_1628
Pedobacter saltans DSM 12145
ADY52187.1
Rfer_0679
Rhodoferax ferrireducens T118 DSM 15236
ABD68430.1
Q220X3
Sde_3918
(Alg14M)
Saccharophagus degradans 2-40
ABD83173.1
ACK10573.1
Q21DQ6
SACE_1973 (fragment)
Saccharopolyspora erythraea NRRL 2338
CAM01283.1
A4FB58
zobellia_4327 (Alya7)
Zobellia galactanivorans DsiJT
CAZ98462.1
Eukaryota
Protein Name
EC#
Organism
GenBank
Uniprot
PDB/3D
Subf
polymannuronate lyase / alginate lyase (AkAly33) (peptide fragments)
4.2.2.3
Aplysia kurodai
polymannuronate lyase / alginate lyase (AkAly28) (peptide fragments)
4.2.2.3
Aplysia kurodai
alginate lyase (AkAly30)
4.2.2.3
Aplysia kurodai
BAJ72675.1
3
CGB_G4370W
Cryptococcus bacillisporus WM276
ADV23512.1
3
CGB_H2530W
Cryptococcus bacillisporus WM276
ADV23900.1
4
CNI01760
Cryptococcus neoformans var. neoformans JEC21
AAW45360.1
4
CNG01710
Cryptococcus neoformans var. neoformans JEC21
AAW44587.1
3
alginate lyase 1 (fragment)
Haliotis discus discus
ABO26617.1
B6RB15
alginate lyase 2
Haliotis discus discus
ABO26618.1
B6RB16
3
alginate lyase (AlgHDD) (alginase)
Haliotis discus discus
BAE45131.1
Q3MV13
3
alginate lyase (HdAly)
4.2.2.3
Haliotis discus hannai
ADO39814.1
BAC87758.1
Q76C78
3
exo-oligoalginate lyase (HdAlex;HdAlex-1)
4.2.2.-
Haliotis discus hannai
ADO39813.1
BAE81787.1
Q25C77
3
alginate lyase (LbAly28)
Littorina brevicula
BAL22352.1
3
ORF
Mycosphaerella pini ATCC MYA-605; NZE1
ABS82817.1
A7DT56
PIIN_08286
Piriformospora indica
CCA74333.1
4
PIIN_04007
Piriformospora indica
CCA70067.1
sr11629 (fragment)
Sporisorium reilianum SRZ2
CBQ67679.1
ORF (fragment)
Termitomyces albuminosus
AEK06448.1
3
Tr21-D02
Tremella fuciformis
ADE10038.1
D5KXZ3
4
Viruses
Protein Name
EC#
Organism
GenBank
Uniprot
PDB/3D
Subf
ATCV1_Z511L
Acanthocystis turfacea Chlorella virus 1 ATCV-1
ABT16645.1
A7K9C1
2
ATCV1_Z771L
Acanthocystis turfacea Chlorella virus 1 ATCV-1
ABT16905.1
A7KA31
1
alginate lyase (Orf2)
Chlorella virus ATCV-1
BAA83789.1
Q9QT64
1
glucuronic acid-specific polysaccharide lyase (vAL-1)
4.2.2.14
Chlorella virus ATCV-1
BAB19127.1
Q9DTZ2
3A0N[A]
3GNE[A,B]
3IM0[A]
1
PBCV1_A215L (A215L)
Paramecium bursaria Chlorella virus 1
AAC96583.2
NP_048562.2
Q84535
1
PBCV1_A561L (A561L)
Paramecium bursaria Chlorella virus 1
AAC96919.1
NP_048917.1
O41043
2
AR158_C263L
Paramecium bursaria Chlorella virus AR158
ABU43808.1
A7RB66
1
AR158_C414R
Paramecium bursaria Chlorella virus AR158
ABU43959.1
A7RBL7
AR158_C681L
Paramecium bursaria Chlorella virus AR158
ABU44226.1
A7RCD4
2
ORF (fragment)
Paramecium bursaria Chlorella virus CVK2
BAE48156.1
Q33DK4
FR483_N293R
Paramecium bursaria Chlorella virus FR483
ABT15578.1
A7J6Z7
1
FR483_N263R
Paramecium bursaria Chlorella virus FR483
ABT15548.1
A7J6W7
2
MT325_M258R
Paramecium bursaria chlorella virus MT325
ABT13812.1
A7ITY8
2
MT325_M289R
Paramecium bursaria chlorella virus MT325
ABT13843.1
A7IU19
1
NY2A_B288L
Paramecium bursaria Chlorella virus NY2A
ABT14687.1
A7IWG3
1
NY2A_B468R
Paramecium bursaria Chlorella virus NY2A
ABT14867.1
A7IWZ3
NY2A_B756L
Paramecium bursaria Chlorella virus NY2A
ABT15155.1
ABT15158.1
A7IXT1
2
Last update:
2012-01-31
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AFMB - CNRS - Universités Aix-Marseille I & II