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Enzyme Classes
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Glycoside Hydrolases
GlycosylTransferases
Polysaccharide Lyases
Carbohydrate Esterases
Carbohydrate-Binding Modules
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PL1
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PL14
PL15
PL16
PL17
PL18
PL19
PL20
PL21
PL22
NC
Family
Tax_id
Organism name
Protein name
GenBank accession
Uniprot accession
PDB accession
EC number
Known activities
Mechanisms
Clan
Site
Polysaccharide Lyase Family 10
Known Activities
pectate lyase (EC
4.2.2.2
)
3D Structure Status
( α / α )
3
barrel
Commercial Enzyme Provider(s)
MEGAZYME
;
PROZOMIX
;
Statistics
GenBank accession (121); Uniprot accession (86); PDB accession (4); 3D entries (2); cryst (0)
Summary
All
(115)
Bacteria
(114)
unclassified
(1)
Structure
(2 )
Characterized
(6)
Subfamilies
(78)
Bacteria
Protein Name
EC#
Organism
GenBank
Uniprot
PDB/3D
Subf
AciX9_3090
Acidobacterium sp. MP5ACTX9
ADW70110.1
1
Astex_1315
Asticcacaulis excentricus CB 48 CS 48
ADU12988.1
C5SLP9
1
Astex_2607
Asticcacaulis excentricus CB 48 CS 48
ADU14252.1
C5SNL3
1
Astex_3292
Asticcacaulis excentricus CB 48 CS 48
ADU14926.1
C5SLF6
Astex_3597
Asticcacaulis excentricus CB 48 CS 48
ADU15225.1
C5SNF1
1
pectate lyase A (PelA)
4.2.2.2
Azospirillum irakense KBC1
AAD25394.1
Q9X592
1R76[A]
1
pectate lyase (PelE)
4.2.2.2
Bacillus alcalophilus NTT33
AAG24437.1
Q9F5V5
1
ABC1141
Bacillus clausii KSM-K16
BAD63679.1
Q5WIX6
pectate lyase E (Pel-15E;Pel15E)
4.2.2.2
Bacillus sp. KSM-P15
BAA81752.1
Q9XDT2
1
pectate lyase P358
Bacillus sp. P-358
BAB90989.1
Q8RR73
1
BXY_10520
Bacteriodes xylanisolvens XB1A
CBK66206.1
D6D861
1
Bacsa_3636
Bacteroides salanitronis DSM 18170
ADY38157.1
Bacsa_2623
Bacteroides salanitronis DSM 18170
ADY37157.1
1
Bacsa_2960
Bacteroides salanitronis DSM 18170
ADY37490.1
BT2254
Bacteroides thetaiotaomicron VPI-5482
AAO77361.1
NP_811167.1
1
BVU_1116
Bacteroides vulgatus ATCC 8482
ABR38807.1
A6KZE3
1
BVU_1813
Bacteroides vulgatus ATCC 8482
ABR39489.1
A6L1C5
Bresu_2939
Brevundimonas subvibrioides ATCC 15264
ADL02245.1
D9QNL0
Bresu_2948
Brevundimonas subvibrioides ATCC 15264
ADL02254.1
D9QNL9
1
Bresu_3169
Brevundimonas subvibrioides ATCC 15264
ADL02475.1
D9QFG0
pectate lyase (CC2035)
(Pel10A)
4.2.2.2
Caulobacter crescentus CB15
AAK24010.1
NP_420842.1
Q9A6P9
CCNA_02115
Caulobacter crescentus NA1000
ACL95580.1
B8GX90
Caul_1698
Caulobacter sp. K31
ABZ70827.1
B0T2K6
pectate lyase (PelA;CJA_3104)
(Pel10A)
4.2.2.2
Cellvibrio japonicus Ueda107
AAG29353.1
ACE85516.1
B3PDE6
Q9F7L3
1GXM[A,B]
1GXN[A]
1GXO[A]
1
CJA_2040
(Pel10B)
Cellvibrio japonicus Ueda107
ACE84005.1
B3PHN9
1
CJA_0384
(Pel10C)
Cellvibrio japonicus Ueda107
ACE84681.1
B3PI45
1
Ccel_1245
Clostridium cellulolyticum H10 ATCC 35319
ACL75601.1
B8I0M6
1
Clocel_3113
Clostridium cellulovorans 743B
ADL52803.1
D9STR9
1
Clocel_3834
Clostridium cellulovorans 743B
ADL53504.1
D9SKT2
1
Clole_3862
Clostridium lentocellum DSM 5427
ADZ85542.1
1
Clo1100_0926
Clostridium sp. BNL1100
AEY65183.1
1
Csp_D27830 (fragment)
Curvibacter putative symbiont of Hydra magnipapillata
CBA31579.1
C9YDX7
1
Cycma_2892
Cyclobacterium marinum DSM 745
AEL26628.1
1
Cycma_4030
Cyclobacterium marinum DSM 745
AEL27738.1
Dd1591_1434
Dickeya zeae Ech1591
ACT06296.1
C6CEI7
1
Fisuc_0678 / FSU_1114
Fibrobacter succinogenes subsp. succinogenes S85
ACX74290.1
ADL26093.1
C9RMR2
1
FIC_01870
Flavobacteriaceae bacterium 3519-10
ACU08313.1
C6X1K0
1
FBFL15_2663
Flavobacterium branchiophilum FL-15
CCB70655.1
1
Fjoh_4116
Flavobacterium johnsoniae UW101
ABQ07124.1
A5FCF0
1
Fjoh_4248
Flavobacterium johnsoniae UW101
ABQ07256.1
A5FC12
1
AciX8_0202
Granulicella mallensis MP5ACTX8
AEU34560.1
1
AciX8_2334
Granulicella mallensis MP5ACTX8
AEU36651.1
1
Halhy_4383
Haliscomenobacter hydrossis DSM 1100
AEE52227.1
1
Hbal_2827
Hirschia baltica ATCC 49814 ATCC 59814
ACT60500.1
C6XQW9
1
Lbys_1624
Leadbetterella byssophila DSM 17132
ADQ17332.1
E4RYT5
1
Marme_3590
Marinomonas mediterranea MMB-1
ADZ92803.1
Mesop_2102
Mesorhizobium opportunistum WSM2075
AEH86581.1
Niako_1335
Niastella koreensis GR20-10
AEV97706.1
1
Niako_3173
Niastella koreensis GR20-10
AEV99503.1
Oter_0380
Opitutus terrae PB90-1
ACB73670.1
B1ZR03
pectate lyase (Pel)
Paenibacillus campinasensis BL11
ADI39638.1
D8WN00
1
KNP414_05477
Paenibacillus mucilaginosus KNP414
AEI44001.1
1
PPE_01582
Paenibacillus polymyxa E681
ADM69421.1
E0RD15
1
PPM_1570 (PelE)
Paenibacillus polymyxa M1
CCC84507.1
1
PPSC2_c1751
Paenibacillus polymyxa SC2
ADO55725.1
E3EEN8
1
Phep_1159
Pedobacter heparinus DSM 2366
ACU03377.1
C6Y3U8
1
PHZ_c2448
Phenylobacterium zucineum HLK1
ACG78857.1
B4RGF1
Psta_1281
Pirellula staleyi DSM 6068
ADB15959.1
D2QW84
Plabr_0685
Planctomyces brasiliensis DSM 5305
ADY58312.1
1
Plabr_0264
Planctomyces brasiliensis DSM 5305
ADY57893.1
Plim_3779
Planctomyces limnophilus DSM 3776
ADG69591.1
D5SWJ8
1
PRU_1903 (PelA)
Prevotella ruminicola 23
ADE81193.1
D5EU83
1
Psesu_0030
Pseudoxanthomonas suwonensis 11-1
ADV25894.1
1
RB3417
Rhodopirellula baltica SH 1
CAD73181.1
NP_865497.1
1
RB9973
Rhodopirellula baltica SH 1
CAD76556.1
Rumal_1079
Ruminococcus albus 7
ADU21605.1
E0L8I5
1
Sde_1051
(Pel10A)
Saccharophagus degradans 2-40
ABD80313.1
Q21LW6
1
Sde_2947
(Pel10B)
Saccharophagus degradans 2-40
ABD82204.1
Q21GH5
1
Acid_1098
Solibacter usitatus Ellin6076
ABJ82092.1
Q02A34
1
Sph21_2883
Sphingobacterium sp. 21
ADZ79430.1
1
TERTU_3387
Teredinibacter turnerae T7901
ACR13233.1
C5BQP4
1
pectate lyase (PelA)
4.2.2.2
Treponema pectinovorum ATCC 33768
AAP41854.1
Q7X0P2
1
pectate lyase (BD9170)
uncultured bacterium
AAW84072.1
Q5ENA7
1
pectate lyase (BD8503)
uncultured bacterium
AAW84059.1
Q5ENC0
1
pectate lyase (BD8565)
uncultured bacterium
AAW84053.1
Q5ENC6
1
pectate lyase (BD9207)
uncultured bacterium
AAW84081.1
Q5EN98
1
pectate lyase
uncultured bacterium
AAW84078.1
Q5ENA1
1
pectate lyase (BD7563)
uncultured bacterium
AAW84073.1
Q5ENA6
1
pectate lyase (BD9904)
uncultured bacterium
AAW84050.1
Q5ENC9
1
pectate lyase
uncultured bacterium
AAW84063.1
Q5ENB6
pectate (BD12273)
uncultured bacterium
AAW84085.1
Q5EN94
1
pectate lyase
uncultured bacterium
AAW84069.1
Q5ENB0
pectate lyase
uncultured bacterium
AAW84080.1
Q5EN99
pectate lyase
uncultured bacterium
AAW84056.1
Q5ENC3
1
pectate lyase
uncultured bacterium
AAW84077.1
Q5ENA2
1
pectate lyase
uncultured bacterium
AAW84074.1
Q5ENA5
pectate lyase
uncultured bacterium
AAW84057.1
Q5ENC2
pectate lyase
uncultured bacterium
AAW84067.1
Q5ENB2
pectate lyase
uncultured bacterium
AAW84070.1
Q5ENA9
pectate lyase
uncultured bacterium
AAW84061.1
Q5ENB8
1
pectate lyase (BD7571)
uncultured bacterium
AAW84058.1
Q5ENC1
1
pectate lyase
uncultured bacterium
AAW84055.1
Q5ENC4
pectate lyase
uncultured bacterium
AAW84075.1
Q5ENA4
pectate lyase
uncultured bacterium
AAW84084.1
Q5EN95
1
pectate lyase (BD8761) (probable fragment)
uncultured bacterium
AAW84052.1
Q5ENC7
1
pectate lyase
uncultured bacterium
AAW84060.1
Q5ENB9
pectate lyase
uncultured bacterium
AAW84065.1
Q5ENB4
pectate lyase
uncultured bacterium
AAW84071.1
Q5ENA8
pectate lyase
uncultured bacterium
AAW84068.1
Q5ENB1
pectate lyase
uncultured bacterium
AAW84079.1
Q5ENA0
pectate lyase (BD9115)
uncultured bacterium
AAW84062.1
Q5ENB7
1
pectate lyase (BD9903)
uncultured bacterium
AAW84051.1
Q5ENC8
1
pectate lyase
uncultured bacterium
AAW84076.1
Q5ENA3
1
pectate lyase
uncultured bacterium
AAW84083.1
Q5EN96
1
pectate lyase (BD8500)
uncultured bacterium
AAW84054.1
Q5ENC5
1
pectate lyase (BD8802)
uncultured bacterium
AAW84082.1
Q5EN97
1
3FN_10
uncultured planctomycete 3FN
ABX10635.1
A9LGW4
Varpa_0703
Variovorax paradoxus EPS
ADU34921.1
Vapar_1353
Variovorax paradoxus S110
ACS18004.1
C5CRS2
xcc-b100_0132 (fragment)
Xanthomonas campestris pv. campestris B100
CAP49462.1
1
xcc-b100_0131 (fragment)
Xanthomonas campestris pv. campestris B100
CAP49461.1
XC_0126
Xanthomonas campestris pv. campestris str. 8004
AAY47217.1
Q4V0F6
1
XCC0122
Xanthomonas campestris pv. campestris str. ATCC 33913
AAM39441.1
NP_635517.1
1
XCR_0142 (PelA)
Xanthomonas campestris pv. raphani 756C
AEL05072.1
1
Last update:
2012-01-31
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1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II