GlycosylTransferase Family 104

Activities in FamilydTDP-β-L-Rhap : arginine α-L-rhamnosyltransferase (EC 2.4.1.-)
Mechanism Inverting
NoteLassak et al. identified EarP as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-b-L-rhamnose as donor substrate (PMID=25686373). The results of this study were subsequently confirmed for Pseudomonas aeruginosa (PMID=26060278), Pseudomonas putida (PMID=28951478) and Neisseria meningitidis (PMID=26840407). In 2016, it has been shown for S. oneidensis (PMID=28451135) and P. aeruginosa (PMID=28451332) that the enzyme is an inverting glycosyltransferase, thus mediating the formation of an a-L-rhamnosidic linkage. A structural basis for the arginine glycosylation reaction was provided by Krafczyk, Macosek and coworkers by having solved the crystal structure of the GT-B folding EarP from P. putida and an accompanying biochemical analysis of the enzyme (PMID=28951478).
Statistics GenBank accession (1174); Uniprot accession (0); PDB accession (5); 3D entries (2); cryst (0)
All (1176) Bacteria (1176) Structure (2) Characterized (4)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 12 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ST1E_0444   Candidatus Kinetoplastibacterium galatii TCC219 AGF48887.1    
 CONE_0387   Candidatus Kinetoplastibacterium oncopeltii TCC290E AGF48187.1    
 CKSOR_00172   Candidatus Kinetoplastibacterium sorsogonicusi MF-08 AWD32302.1    
 BN1208_0682   Candidatus Methylopumilus planktonicus MMS-10A-171 CEZ19568.1    
 BN1209_0702   Candidatus Methylopumilus turicensis MMS-10A-171 CEN55746.1    
 CJA_2148   Cellvibrio japonicus Ueda107 ACE85380.1    
 CBR65_01855   Cellvibrio sp. PSBB006 ARU26277.1    
 B0D95_06595   Cellvibrio sp. PSBB023 AQT59789.1    
 CXB49_15425   Chromobacterium sp. ATCC 53434 AUH52109.1    
 BKX93_19850   Chromobacterium vaccinii 21-1 AOZ52021.1    
 CFN79_11165   Chromobacterium vaccinii XC0014 AVG16361.1    
 CRN81_06365   Chromobacterium violaceum CV1192 ATP28044.1    
 CR207_06380   Chromobacterium violaceum CV1197 ATP31954.1    
 LT85_1848   Collimonas arenae Cal35 AIY41006.1    
 CAter282_1630   Collimonas arenae Ter282 AMP09412.1    
 CFU_2766   Collimonas fungivorans Ter331 AEK62593.1    
 CFter6_3478   Collimonas fungivorans Ter6 AMO96111.1    
 CPter291_1865   Collimonas pratensis Ter291 AMP14131.1    
 CPter91_1834   Collimonas pratensis Ter91 AMP04207.1    
 SRAA_0998   Comamonadaceae bacterium A1 BAO80852.1    
 SMCB_0900   Comamonadaceae bacterium B1 BAO83128.1    
 MA05_12370   Comamonas aquatica CJG ANY62736.1    
 B5M06_00270   Comamonas kerstersii 8943 AQZ96936.1    
 CCO03_08165   Comamonas serinivorans DSM 26136 ARU04649.1    
 CtCNB1_1669   Comamonas testosteroni CNB-2 CNB-1 ACY32415.1    
 O987_10480   Comamonas testosteroni TK102 AIJ46220.1    
 RR42_m2842   Cupriavidus basilensis 4G11 AJG20216.1    
 CR3_1843   Cupriavidus gilardii CR3 ALD91056.1    
 Rmet_2411   Cupriavidus metallidurans CH34 ABF09288.1    
 C3Z06_24620 (EarP)   Cupriavidus metallidurans Ni-2 AVA36483.1    
 A2G96_15970   Cupriavidus nantongensis X1 AMR79114.1    
 CNE_1c24320   Cupriavidus necator N-1 AEI77751.1    
 BJN34_13670   Cupriavidus necator NH9 AQV94924.1    
 BKK80_15505   Cupriavidus sp. USMAA1020 AOZ07065.1    
 BKK79_17445   Cupriavidus sp. USMAA2-4 AOY93389.1    
 BKK81_14555   Cupriavidus sp. USMAHM13 AOZ00319.1    
 RALTA_A2049   Cupriavidus taiwanensis LMG 19424 CAQ69989.1    
 Csp_E36710 (fragment)   Curvibacter putative symbiont of Hydra magnipapillata CBA26583.1    
 AEP_00819   Curvibacter sp. AEP1-3 ARV17776.1    
 Daro_2036   Dechloromonas aromatica RCB AAZ46781.1    
 Dsui_2468   Dechlorosoma suillum PS AEV26826.1    
 CHL79_21215   Delftia acidovorans RAY209 ATH14767.1    
 Daci_2872   Delftia acidovorans SPH-1 ABX35510.1    
 DelCs14_3860   Delftia sp. Cs1-4 AEF90848.1    
 BO996_13265   Delftia sp. HK171 APE48745.1    
 BI380_09090   Delftia tsuruhatensis CM13 AOV05859.1    
 BA022_01890   Diaphorobacter polyhydroxybutyrativorans SL-205 ASI67438.1    
 SAMEA4412678_01032   Eikenella corrodens NCTC10596 SNW08453.1    
 RN87_06485   Fusobacterium hwasookii ChDC F174 ALQ40178.1    
 RN92_07115   Fusobacterium hwasookii ChDC F206 ALQ35674.1    
 RN97_05600   Fusobacterium hwasookii ChDC F300 ALQ37693.1    
 C4N19_07505   Fusobacterium mortiferum ATCC 9817 AVQ18948.1    
 C4N15_04490   Fusobacterium necrophorum subsp. funduliforme 1_1_36S AVQ20942.1    
 HMPREF0409_00860   Fusobacterium nucleatum subsp. animalis 4_8 AGM23324.1    
 FSDG_00303   Fusobacterium nucleatum subsp. animalis 7_1 EEO41744.1    
 CBG60_07525   Fusobacterium nucleatum subsp. animalis ChDC F332 ASG31071.1    
 RN98_07355   Fusobacterium nucleatum subsp. animalis KCOM 1279 ALF17996.1    
 RO08_03275   Fusobacterium nucleatum subsp. animalis KCOM 1325 ALF21343.1    
 C7Y58_06640 (EarP)   Fusobacterium nucleatum subsp. nucleatum 25586 AVQ15118.1    
 C4N14_08630 (EarP)   Fusobacterium nucleatum subsp. nucleatum ATCC 23726 AVQ23608.1    
 FN0719   Fusobacterium nucleatum subsp. nucleatum ATCC 25586 AAL94915.1    
 RO05_07035   Fusobacterium nucleatum subsp. nucleatum ChDC F316 KCOM 1322 ALF24132.1    
 RN84_06835   Fusobacterium nucleatum subsp. nucleatum ChDC F317 ASG26569.1    
 RN95_01605   Fusobacterium nucleatum subsp. nucleatum KCOM 1250 ALF25187.1    
 RO02_02465   Fusobacterium nucleatum subsp. polymorphum ChDC F306 ALM93517.1    
 RN93_06580   Fusobacterium nucleatum subsp. polymorphum ChDC F319 ALQ42467.1    
 CBG50_05980   Fusobacterium nucleatum subsp. polymorphum KCOM 1260 (=ChDC F218) ASC02897.1    
 CBG61_03570   Fusobacterium nucleatum subsp. polymorphum KCOM 1275 ASG28104.1    
 ERS445057_01527   Fusobacterium nucleatum subsp. polymorphum NCTC10562 CKH00579.1    
 HMPREF0405_01054   Fusobacterium nucleatum subsp. vincentii 3_1_27 EFG34775.1    
 HMPREF0946_00201   Fusobacterium nucleatum subsp. vincentii 3_1_36A2 EEU32128.1    
 RN99_05270   Fusobacterium nucleatum subsp. vincentii ChDC F8 KCOM 1231 ALF19899.1    
 CS401_00945   Fusobacterium nucleatum subsp. vincentii KCOM 2931 ATV05475.1    
 C4N17_02415   Fusobacterium periodonticum 2_1_31 AVQ24645.1    
 CTM72_11395   Fusobacterium periodonticum KCOM 1261 ATV60255.1    
 CTM64_05695   Fusobacterium periodonticum KCOM 1262 ATV35583.1    
 CTM74_06665   Fusobacterium periodonticum KCOM 1263 ATV61523.1    
 CTM78_03340   Fusobacterium periodonticum KCOM 1277 ATV63508.1    
 CTM86_05635   Fusobacterium periodonticum KCOM 1282 ATV66115.1    
 CTM68_09285   Fusobacterium periodonticum KCOM 1283 ATV57849.1    
 CTM92_02110   Fusobacterium periodonticum KCOM 2305 ATV67522.1    
 CTM98_06525   Fusobacterium periodonticum KCOM 2555 ATV70327.1    
 CTN00_02480   Fusobacterium periodonticum KCOM 2653 ATV71944.1    
 AXF16_08685   Fusobacterium sp. oral taxon 203 W7671 ASS40151.1    
 C4N20_16125   Fusobacterium ulcerans ATCC 49185 AVQ29678.1    
 C4N18_14830   Fusobacterium varium ATCC 27725 AVQ32594.1    
 FV113G1_21700   Fusobacterium varium Fv113-g1 BBA51820.1    
 Galf_0622   Gallionella capsiferriformans ES-2 ADL54664.1    
 DKL61_03470 (fragment)   Gammaproteobacteria bacterium ESL0073 AWM79483.1    
 DKL61_03475 (fragment)   Gammaproteobacteria bacterium ESL0073 AWM79484.1    
 A9404_12485   Halothiobacillus sp. LS2 ANJ68083.1    
 F506_14895   Herbaspirillum hiltneri N3 AKZ63781.1    
 Hrubri_3079   Herbaspirillum rubrisubalbicans M1 ALU90248.1    
 Hsc_3017   Herbaspirillum seropedicae AU14040 AON55293.1    
 Hsero_3062   Herbaspirillum seropedicae SmR1 ADJ64550.1    
 ACP92_15365   Herbaspirillum seropedicae Z67 AKN66478.1    
 hmeg3_15085   Herbaspirillum sp. meg3 ASU39482.1    
 HEAR0987   Herminiimonas arsenicoxydans CAL61169.1    
 LPB072_14130   Hydrogenophaga crassostreae LPB0072 AOW13809.1    
 Q5W_08510   Hydrogenophaga sp. PBC AOS82130.1    
Top


Last update: 2018-06-11 © Copyright 1998-2018
AFMB - CNRS - Université d'Aix-Marseille