GlycosylTransferase Family 104

Activities in FamilyDTDP-L-Rha: α-L-rhamnosyltransferase (EC 2.4.1.-);
Mechanism Inverting
NoteLassak et al. identified EarP as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-b-L-rhamnose as donor substrate (PMID=25686373). The results of this study were subsequently confirmed for Pseudomonas aeruginosa (PMID=26060278), Pseudomonas putida (PMID=28951478) and Neisseria meningitidis (PMID=26840407). In 2016, it has been shown for S. oneidensis (PMID=28451135) and P. aeruginosa (PMID=28451332) that the enzyme is an inverting glycosyltransferase, thus mediating the formation of an a-L-rhamnosidic linkage. A structural basis for the arginine glycosylation reaction was provided by Krafczyk, Macosek and coworkers by having solved the crystal structure of the GT-B folding EarP from P. putida and an accompanying biochemical analysis of the enzyme (PMID=28951478).
Statistics GenBank accession (3950); Uniprot accession (4); PDB accession (12); 3D entries (4); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 H3L94_00325 (EarP)   Neisseria shayeganii DSM 22244 QMT40552.1    
 H3L95_05400 (EarP)   Neisseria sicca DSM 17713 QMT39025.1    
 LPB402_10725 (EarP)   Neisseria sicca LPB0402 QXW94711.1    
 J7445_03475 (EarP)   Neisseria sicca NS20201025 QTM23816.1    
 ORY85_02655 (EarP)   Neisseria sp. 3986 WWV75314.1    
 V9W64_00945 (EarP)   Neisseria sp. 51.81 WWY03351.1    
 V6667_04215 (EarP)   Neisseria sp. CCUG 45853 WWO72272.1    
 LVJ85_07865 (EarP)   Neisseria sp. Dent CA1/247 UOO75964.1    
 RSJ68_04315 (EarP)   Neisseria sp. DTU_2020_1000833_1_SI_GRL_NUU_006 WNU97956.1    
 RRV97_04625 (EarP)   Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055 WNS84418.1    
 CGZ77_08235   Neisseria sp. KEM232 ASP17731.1    
 FAH66_05215 (EarP)   Neisseria subflava ATCC 49275 QCL70938.1    
 KCG52_01620 (EarP)   Neisseria subflava HP0048 UTG68051.1    
 KCG51_05155 (EarP)   Neisseria subflava HP0069 UTG78115.1    
 RDV50_09375 (EarP)   Neisseria subflava LMG 5313 WMS17562.1    
 KCG56_02860 (EarP)   Neisseria subflava TT0073 UTG72402.1    
 KCG54_06965 (EarP)   Neisseria subflava TT0077 UTG68975.1    
 H3L96_10435 (EarP)   Neisseria wadsworthii DSM 22245 QMT35439.1    
 NCTC12742_02091   Neisseria weaveri NCTC12742 VEJ52174.1    
 CGZ65_07170   Neisseria weixii 10022 ATD65143.1    
 D0T92_06950 (EarP)   Neisseria zalophi ATCC BAA-2455 QEY26290.1    
 SAMEA4504057_01613   Neisseria zoodegmatis NCTC12230 SNU80102.1    
 MIS31_08285   Neisseriaceae bacterium 07LB258 ULJ66265.1    
 MIS33_05420   Neisseriaceae bacterium 08LB461 ULJ65692.1    
 MIS46_05665   Neisseriaceae bacterium 09LB414 ULJ63527.1    
 MIS44_06115   Neisseriaceae bacterium 10LB456 ULJ59285.1    
 N7E01_01715 (EarP) (fragment)   Neopusillimonas aromaticivorans CC-YST667 WJJ93938.1    
 N7E01_01720 (EarP) (fragment)   Neopusillimonas aromaticivorans CC-YST667 WJJ93939.1    
 G3580_19615 (EarP)   Nitrogeniibacter mangrovi M9-3-2 QID19630.1    
 AAW31_07340   Nitrosomonas communis Nm2 AKH39509.1    
 NE0898   Nitrosomonas europaea ATCC 19718 CAD84809.1    
 Neut_1303   Nitrosomonas eutropha C91 ABI59553.1    
 NAL212_2416   Nitrosomonas sp. AL212 ADZ27232.1    
 HRU73_04740 (EarP)   Nitrosomonas sp. H1_AOB3 QOJ08847.1    
 Nit79A3_2025   Nitrosomonas sp. Is79A3 AEJ01816.1    
 NX761_07650 (EarP)   Nitrosomonas sp. PLL12 UVS62961.1    
 RBH92_05835 (EarP)   Nitrosomonas sp. sh817 WMJ09714.1    
 Nstercoris_00051   Nitrosomonas stercoris KYUHI-S BBL33826.1    
 ATY38_00515   Nitrosomonas ureae Nm10 ALQ49855.1    
 SAMN06296273_1123   Nitrosomonas ureae Nm15 SNX59685.1    
 JY500_17310 (EarP)   Niveibacterium microcysteis HC41 QSI76213.1    
 FAY22_10910 (EarP)   Noviherbaspirillum sp. UKPF54 QDZ28412.1    
 GJQ54_03145 (EarP)   Oceanospirillaceae bacterium ASx5O QQD20827.1    
 OF820_04380 (EarP)   Oceanotoga sp. DSM 15011 UYP00925.1    
 I6G29_02670 (EarP)   Oligella ureolytica FDAARGOS_872 QPT40525.1    
 CEQ07_04390 (EarP)   Oligella urethralis FDAARGOS_329 AVL70727.1    
 RP300_00838   Oligella urethralis MSHR-50412PR WOS37290.1    
 DHf2319_09335 (EarP)   Orrella daihaiensis f23 UOD49664.1    
 ODI_R2902   Orrella dioscoreae SOE50698.1    
 DBV39_09190 (EarP)   Orrella marina HZ20 AWB33853.1    
 OTERR_17510   Oryzomicrobium terrae TPP412 QEL65227.1    
 C6570_14165 (EarP)   Ottowia oryzae KADR8-3 AVO35248.1    
 ADJ79_09350   Ottowia sp. oral taxon 894 W10237 AKU67370.1    
 R0D99_06120 (EarP)   Ottowia sp. SB7-C50 WOP16586.1    
 J1M35_14595 (EarP)   Ottowia testudinis 27C QTD44330.1    
 NB636_02560 (EarP)   Oxalobacter aliiformigenes BA2 WAV99762.1    
 NB645_06790 (EarP)   Oxalobacter aliiformigenes HOxNP-1 WAV96533.1    
 NB643_02595 (EarP)   Oxalobacter aliiformigenes HOxNP-2 WAV95672.1    
 NB641_08520 (EarP)   Oxalobacter aliiformigenes HOxNP-3 WAV92823.1    
 NB646_08060 (EarP)   Oxalobacter aliiformigenes OxK WAV90788.1    
 NB647_07670 (EarP)   Oxalobacter aliiformigenes Va3 WAV88754.1    
 BRW83_1049   Oxalobacter formigenes HC-1 ARQ45797.1    
 NB638_04145 (EarP)   Oxalobacter formigenes HOxHM18 WAW08629.1    
 NB642_06065 (EarP)   Oxalobacter formigenes HOxSLD-1 WAW02705.1    
 NB644_05270 (EarP)   Oxalobacter formigenes HOxSLD-2 WAW02437.1    
 BRW84_04900   Oxalobacter formigenes OXCC13 ARQ78027.1    
 NB639_05505 (EarP)   Oxalobacter formigenes OxWR1 WAW04808.1    
 FPZ51_07520 (EarP)   Oxalobacter formigenes SSYG-15 QDX33424.1    
 NB640_11165 (EarP)   Oxalobacter vibrioformis WoOx3 WAW09771.1    
 NHH88_12155 (EarP)   Oxalobacteraceae bacterium OTU3CAMAD1 USX16483.1    
 NHH73_11540 (EarP)   Oxalobacteraceae bacterium OTU3CINTB1 USX28865.1    
 NHH82_12170 (EarP)   Oxalobacteraceae bacterium OTU3REALA1 USX22862.1    
 H9L24_01230 (EarP)   Paenacidovorax monticola KACC 19171 QNP59666.1    
 PAEH1_12265   Paenalcaligenes hominis 15S00501 AQS52113.1    
 THUN1379_12840 (EarP)   Paludibacterium sp. THUN1379 BEV71802.1    
 AA956_21440   Pandoraea apista AU2161 AKI63800.1    
 AT395_20840   Pandoraea apista DSM 16535 ALS68240.1    
 AL486_22905   Pandoraea apista FDAARGOS_126 AVF42205.1    
 XM39_04120   Pandoraea apista TF80G25 AKH71527.1    
 SG18_04120   Pandoraea apista TF81F4 AJE97551.1    
 NTU39_22250 (EarP)   Pandoraea commovens LB-19-202-79 UVA78735.1    
 AB870_07020   Pandoraea faecigallinarum DSM 23572 AKM32614.1    
 PI93_007915 (EarP)   Pandoraea fibrosis 6399 QHF12581.1    
 PJ20_020080 (EarP)   Pandoraea fibrosis 7641 QHE93857.1    
 AT302_03605   Pandoraea norimbergensis DSM 11628 ALS58992.1    
 MB84_00055   Pandoraea oxalativorans DSM 23570 AKC71988.2    
 U875_03550   Pandoraea pnomenusa 3kgm AHB04582.2    
 LV28_09780   Pandoraea pnomenusa DSM 16536 AIU26793.1    
 FKQ53_19480 (EarP)   Pandoraea pnomenusa M202 QDH61223.1    
 A6P55_07110   Pandoraea pnomenusa MCB032 ANC44020.1    
 X636_05940   Pandoraea pnomenusa RB-44 AHB75032.1    
 DA70_20600   Pandoraea pnomenusa RB38 AHN76597.1    
 FP568_19540 (EarP)   Pandoraea pnomenusa TF-18 QDX23197.1    
 RO07_04100   Pandoraea pulmonicola DSM 16583 AJC23045.2    
 PanNE5_22630   Pandoraea sp. NE5 BDD92823.1    
 OYT13_20700 (EarP)   Pandoraea sp. XJJ-1 WAL82191.1    
 DRB87_18655 (EarP)   Pandoraea sp. XY-2 QBC32952.1    
 NA29_24960   Pandoraea sputorum DSM 21091 AJC18388.1    
 SAMEA4530655_04181   Pandoraea sputorum NCTC13161 SNU88303.1    
 THI4931_26710 (EarP)   Pandoraea sputorum THI4931 BET11629.1    
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