Glycoside Hydrolase Family 86

Activities in Familyβ-agarase (EC 3.2.1.81); β-porphyranase (EC 3.2.1.178)
Mechanism probably retaining
ClanGH-A
3D Structure Status( β / α ) 8 (inferred)
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
Statistics GenBank accession (106); Uniprot accession (30); PDB accession (5); 3D entries (2); cryst (0)
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AVL56_03130   Alteromonas addita R10SW13 AMJ93391.1    
 AV939_03425   Alteromonas sp. Mac1 AMJ85714.1    
 AV940_03270   Alteromonas sp. Mac2 AMJ89574.1    
 AOR13_2887   Alteromonas stellipolaris LMG 21856 ALM91891.1    
 AVL57_04355   Alteromonas stellipolaris LMG 21861 AMJ73272.1    
 A6K25_01425   Alteromonas stellipolaris PQQ-42 ANB20065.1    
 A6F57_13070   Alteromonas stellipolaris PQQ-44 ANB26039.1    
 β-porphyranase (BpGH86A;BACPLE_01693) 3.2.1.178 Bacteroides plebeius DSM 17135 EDY95427.1 B5CY96 4AW7[A]
 BACPLE_01694 (BpGH86B)   Bacteroides plebeius DSM 17135 EDY95428.1    
 BuGH86   Bacteroides uniformis NP1     5TA0[B]
5TA1[A]
5TA5[A,B]
5TA0[A]
 Celal_2494   Cellulophaga algicola DSM 14237 ADV49782.1    
 M666_09755   Cellulophaga baltica 18 AIZ41843.1    
 A5M85_02235   Cellulophaga lytica DAU203 APU11970.1    
 Celly_0429   Cellulophaga lytica DSM 7489 ADY28264.1    
 IX49_01845   Cellulophaga lytica HI1 AIM59333.1    
 β-agarase (Aga3)   Cellulophaga sp. W5C ATI14841.1    
 β-agarase (AgaA;Aga86) 3.2.1.81 Cellvibrio sp. OA-2007 BAG48880.1 B3IXL6  
 Caka_0371   Coraliomargarita akajimensis DSM 45221 ADE53396.1 D5EMJ0  
 Caka_0375   Coraliomargarita akajimensis DSM 45221 ADE53400.1 D5EMJ4  
 Caka_0376   Coraliomargarita akajimensis DSM 45221 ADE53401.1 D5EMJ5  
 Caka_0476   Coraliomargarita akajimensis DSM 45221 ADE53501.1 D5EN66  
 Caka_0493   Coraliomargarita akajimensis DSM 45221 ADE53518.1 D5EN83  
 Caka_0610   Coraliomargarita akajimensis DSM 45221 ADE53635.1 D5ENX6  
 Caka_0995   Coraliomargarita akajimensis DSM 45221 ADE54017.1 D5ER24  
 Caka_0058   Coraliomargarita akajimensis DSM 45221 ADE53087.1 D5EKY5  
 Caka_0135   Coraliomargarita akajimensis DSM 45221 ADE53164.1 D5EL62  
 Caka_0252   Coraliomargarita akajimensis DSM 45221 ADE53278.1 D5ELV3  
 Caka_0475   Coraliomargarita akajimensis DSM 45221 ADE53500.1 D5EN65  
 Caka_0508   Coraliomargarita akajimensis DSM 45221 ADE53533.1 D5EN98  
 Caka_0559   Coraliomargarita akajimensis DSM 45221 ADE53584.1 D5ENS5  
 Caka_0973   Coraliomargarita akajimensis DSM 45221 ADE53995.1 D5ER02  
 Caka_1014   Coraliomargarita akajimensis DSM 45221 ADE54036.1 D5EHJ5  
 Caka_1253   Coraliomargarita akajimensis DSM 45221 ADE54273.1 D5EIK7  
 agarase GM004975   Flammeovirga pacifica WPAGA1 ART28007.1    
 agarase GM001957   Flammeovirga pacifica WPAGA1 ART27997.1    
 agarase GM004974   Flammeovirga pacifica WPAGA1 ART28006.1    
 agarase GM004007   Flammeovirga pacifica WPAGA1 ART28002.1    
 agarase GM002050   Flammeovirga pacifica WPAGA1 ART27999.1    
 agarase GM001950   Flammeovirga pacifica WPAGA1 ART27996.1    
 agarase GM004902   Flammeovirga pacifica WPAGA1 ART28005.1    
 β-agarase (Aga4383) 3.2.1.81 Flammeovirga pacifica WPAGA1 AIA22721.1
ART27998.1
   
 MY04_4831   Flammeovirga sp. MY04 ANQ52166.1    
 MY04_4220   Flammeovirga sp. MY04 ANQ51562.1    
 MY04_4227   Flammeovirga sp. MY04 ANQ51569.1    
 MY04_5525   Flammeovirga sp. MY04 ANQ52856.1    
 MY04_4543   Flammeovirga sp. MY04 ANQ51878.1    
 MY04_5527   Flammeovirga sp. MY04 ANQ52858.1    
 MY04_4226   Flammeovirga sp. MY04 ANQ51568.1    
 MY04_2555   Flammeovirga sp. MY04 ANQ49924.1    
 MY04_2971   Flammeovirga sp. MY04 ANQ50339.1    
 MY04_4098   Flammeovirga sp. MY04 ANQ51442.1    
 MY04_5524   Flammeovirga sp. MY04 ANQ52855.1    
 β-agarase   Flammeovirga sp. OC4 AJW82064.1    
 β-agarase (fragment)   Flammeovirga sp. OC4 AJW82063.1    
 β-agarase   Flammeovirga sp. OC4 AJW82059.1    
 β-agarase   Flammeovirga sp. OC4 AJW82060.1    
 agarase B8 (AgaB8)   Flammeovirga yaeyamensis MY04 (CGMCC 2777) ACY02047.1
ACZ97442.1
D0PR04  
 BN863_20910 (fragment)   Formosa agariphila KMM 3901 CDF79803.1    
 BN863_20920 (fragment)   Formosa agariphila KMM 3901 CDF79804.1    
 agarase   Gilvimarinus polysaccharolyticus AEE61375.1    
 Glaag_3492   Glaciecola sp. 4H-3-7+YE-5 AEE24424.1    
 ALGA_0042   Marinifilaceae bacterium SPP2 BAX78437.1    
 ALGA_0067   Marinifilaceae bacterium SPP2 BAX78462.1    
 ALGA_0556 (fragment)   Marinifilaceae bacterium SPP2 BAX78949.1    
 Mag101_05875   Microbulbifer agarilyticus GP101 AQQ67218.1    
 Mag101_05880   Microbulbifer agarilyticus GP101 AQQ67219.1    
 A3224_10245   Microbulbifer thermotolerans DAU221 AMX02903.1    
 A3224_09805   Microbulbifer thermotolerans DAU221 AMX02836.1    
 β-agarase (AgaO) 3.2.1.81 Microbulbifer thermotolerans JAMB-A94 BAD86832.1
BAK08903.1
Q5KTI5  
 MS130 (probable fragment)   Microscilla sp. PRE1 AAK62852.1
NP_116818.1
Q93PA1  
 MS109   Microscilla sp. PRE1 AAK62831.1
NP_116797.1
Q93PC0  
 MS115   Microscilla sp. PRE1 AAK62837.1
NP_116803.1
Q934I7  
 exo-type β-agarase (Aga1) 3.2.1.81 Paenibacillus sp. SSG-1 BAT46645.1
AML39432.1
   
 PSMK_02610   Phycisphaera mikurensis NBRC 102666 BAM02420.1    
 PSMK_16240   Phycisphaera mikurensis NBRC 102666 BAM03783.1    
 PSMK_22240   Phycisphaera mikurensis NBRC 102666 BAM04383.1    
 PSMK_25430   Phycisphaera mikurensis NBRC 102666 BAM04702.1    
 BW723_05745   Polaribacter reichenbachii 6Alg 8T APZ45829.1    
 BW723_03925 (fragment)   Polaribacter reichenbachii 6Alg 8T APZ45497.1    
 BTO07_15880   Polaribacter sp. SA4-12 ARV16524.1    
 BTO07_15850   Polaribacter sp. SA4-12 ARV16955.1    
 BTO07_15875   Polaribacter sp. SA4-12 ARV16523.1    
 PARC_a2193   Pseudoalteromonas arctica A 37-1-2 ATC86708.1    
 PARC_a2201   Pseudoalteromonas arctica A 37-1-2 ATC86714.1    
 β-agarase II (AgrA;Patl_2341) 3.2.1.81 Pseudoalteromonas atlantica T6c ABG40858.1
A32261
AAA25696.1
P13734
Q15TD0
 
 Patl_0839   Pseudoalteromonas atlantica T6c ABG39367.1 Q15XM1  
 Patl_1904   Pseudoalteromonas atlantica T6c ABG40423.1 Q15UL5  
 D172_009435   Pseudoalteromonas sp. Bsw20308 ALQ08258.1    
 RB3421 (AgrA)   Rhodopirellula baltica SH 1 CAD73183.1
NP_865499.1
Q7TU03  
 endo-β-agarase C (AgaC;Sde_2650) (Aga86C) 3.2.1.81 Saccharophagus degradans 2-40 ABD81910.1 Q21HB9  
 β-agarase II / E (AgaE;Sde_2655) (Aga86E) 3.2.1.81 Saccharophagus degradans 2-40 ABD81915.1 Q21HB4  
 M5M_16865   Simiduia agarivorans SA1 = DSM 21679 AFV00504.1
AFV00504.2
   
 M5M_16910 (probable fragment)   Simiduia agarivorans SA1 = DSM 21679 AFV00513.1
AFV00513.2
   
 AXE80_01580   Wenyingzhuangia fucanilytica CZ1127 ANW95064.1    
 AXE80_01610   Wenyingzhuangia fucanilytica CZ1127 ANW95070.1    
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