Known Activities	β-agarase (EC 3.2.1.81)
Mechanism	probably retaining
Clan	GH-A
3D Structure Status	( β / α ) 8 (inferred)
Catalytic Nucleophile/Base	Glu (inferred)
Catalytic Proton Donor	Glu (inferred)
Statistics	GenBank accession (40); Uniprot accession (28);

Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D
Celal_2494		Cellulophaga algicola DSM 14237	ADV49782.1
Celly_0429		Cellulophaga lytica DSM 7489	ADY28264.1
AgaA		Cellvibrio sp. OA-2007	BAG48880.1	B3IXL6
Caka_0371		Coraliomargarita akajimensis DSM 45221	ADE53396.1	D5EMJ0
Caka_0375		Coraliomargarita akajimensis DSM 45221	ADE53400.1	D5EMJ4
Caka_0376		Coraliomargarita akajimensis DSM 45221	ADE53401.1	D5EMJ5
Caka_0476		Coraliomargarita akajimensis DSM 45221	ADE53501.1	D5EN66
Caka_0493		Coraliomargarita akajimensis DSM 45221	ADE53518.1	D5EN83
Caka_0610		Coraliomargarita akajimensis DSM 45221	ADE53635.1	D5ENX6
Caka_0995		Coraliomargarita akajimensis DSM 45221	ADE54017.1	D5ER24
Caka_0058		Coraliomargarita akajimensis DSM 45221	ADE53087.1	D5EKY5
Caka_0135		Coraliomargarita akajimensis DSM 45221	ADE53164.1	D5EL62
Caka_0252		Coraliomargarita akajimensis DSM 45221	ADE53278.1	D5ELV3
Caka_0475		Coraliomargarita akajimensis DSM 45221	ADE53500.1	D5EN65
Caka_0508		Coraliomargarita akajimensis DSM 45221	ADE53533.1	D5EN98
Caka_0559		Coraliomargarita akajimensis DSM 45221	ADE53584.1	D5ENS5
Caka_0973		Coraliomargarita akajimensis DSM 45221	ADE53995.1	D5ER02
Caka_1014		Coraliomargarita akajimensis DSM 45221	ADE54036.1	D5EHJ5
Caka_1253		Coraliomargarita akajimensis DSM 45221	ADE54273.1	D5EIK7
agarase B8 (AgaB8)		Flammeovirga yaeyamensis MY04 (CGMCC 2777)	ACY02047.1 ACZ97442.1	D0PR04
Glaag_3492		Glaciecola agarilytica 4H-3-7+YE-5	AEE24424.1
agarase		Marinimicrobium sp. yn3	AEE61375.1
β-agarase (AgaO)	3.2.1.81	Microbulbifer thermotolerans JAMB-A94	BAD86832.1 BAK08903.1	Q5KTI5
MS130 (probable fragment)		Microscilla sp. PRE1	AAK62852.1 NP_116818.1	Q93PA1
MS109		Microscilla sp. PRE1	AAK62831.1 NP_116797.1	Q93PC0
MS115		Microscilla sp. PRE1	AAK62837.1 NP_116803.1	Q934I7
β-agarase II (AgrA;Patl_2341)	3.2.1.81	Pseudoalteromonas atlantica T6c	A32261 AAA25696.1 ABG40858.1	P13734.1 Q15TD0
Patl_0839		Pseudoalteromonas atlantica T6c	ABG39367.1	Q15XM1
Patl_1904		Pseudoalteromonas atlantica T6c	ABG40423.1	Q15UL5
RB3421 (AgrA)		Rhodopirellula baltica SH 1	CAD73183.1 NP_865499.1
endo-β-agarase C (AgaC;Sde_2650) (Aga86C)	3.2.1.81	Saccharophagus degradans 2-40	ABD81910.1	Q21HB9
β-agarase II / E (AgaE;Sde_2655) (Aga86E)	3.2.1.81	Saccharophagus degradans 2-40	ABD81915.1	Q21HB4

Last update: 2012-01-31 © Copyright 1998-2012
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