Activities in Family	β-agarase (EC 3.2.1.81); β-porphyranase (EC 3.2.1.178)
Mechanism	probably retaining
Clan	GH-A
3D Structure Status	( β / α ) 8 (inferred)
Catalytic Nucleophile/Base	Glu (inferred)
Catalytic Proton Donor	Glu (inferred)
Statistics	GenBank accession (100); Uniprot accession (30); PDB accession (1); 3D entries (1); cryst (0)

Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D
AVL56_03130		Alteromonas addita R10SW13	AMJ93391.1
AV939_03425		Alteromonas sp. Mac1	AMJ85714.1
AV940_03270		Alteromonas sp. Mac2	AMJ89574.1
AOR13_2887		Alteromonas stellipolaris LMG 21856	ALM91891.1
AVL57_04355		Alteromonas stellipolaris LMG 21861	AMJ73272.1
A6K25_01425		Alteromonas stellipolaris PQQ-42	ANB20065.1
A6F57_13070		Alteromonas stellipolaris PQQ-44	ANB26039.1
β-porphyranase (BpGH86A;BACPLE_01693)	3.2.1.178	Bacteroides plebeius DSM 17135	EDY95427.1	B5CY96	4AW7[A]
BACPLE_01694 (BpGH86B)		Bacteroides plebeius DSM 17135	EDY95428.1
Celal_2494		Cellulophaga algicola DSM 14237	ADV49782.1
M666_09755		Cellulophaga baltica 18	AIZ41843.1
A5M85_02235		Cellulophaga lytica DAU203	APU11970.1
Celly_0429		Cellulophaga lytica DSM 7489	ADY28264.1
IX49_01845		Cellulophaga lytica HI1	AIM59333.1
β-agarase (AgaA;Aga86)	3.2.1.81	Cellvibrio sp. OA-2007	BAG48880.1	B3IXL6
Caka_0371		Coraliomargarita akajimensis DSM 45221	ADE53396.1	D5EMJ0
Caka_0375		Coraliomargarita akajimensis DSM 45221	ADE53400.1	D5EMJ4
Caka_0376		Coraliomargarita akajimensis DSM 45221	ADE53401.1	D5EMJ5
Caka_0476		Coraliomargarita akajimensis DSM 45221	ADE53501.1	D5EN66
Caka_0493		Coraliomargarita akajimensis DSM 45221	ADE53518.1	D5EN83
Caka_0610		Coraliomargarita akajimensis DSM 45221	ADE53635.1	D5ENX6
Caka_0995		Coraliomargarita akajimensis DSM 45221	ADE54017.1	D5ER24
Caka_0058		Coraliomargarita akajimensis DSM 45221	ADE53087.1	D5EKY5
Caka_0135		Coraliomargarita akajimensis DSM 45221	ADE53164.1	D5EL62
Caka_0252		Coraliomargarita akajimensis DSM 45221	ADE53278.1	D5ELV3
Caka_0475		Coraliomargarita akajimensis DSM 45221	ADE53500.1	D5EN65
Caka_0508		Coraliomargarita akajimensis DSM 45221	ADE53533.1	D5EN98
Caka_0559		Coraliomargarita akajimensis DSM 45221	ADE53584.1	D5ENS5
Caka_0973		Coraliomargarita akajimensis DSM 45221	ADE53995.1	D5ER02
Caka_1014		Coraliomargarita akajimensis DSM 45221	ADE54036.1	D5EHJ5
Caka_1253		Coraliomargarita akajimensis DSM 45221	ADE54273.1	D5EIK7
agarase GM004975		Flammeovirga pacifica WPAGA1	ART28007.1
agarase GM001957		Flammeovirga pacifica WPAGA1	ART27997.1
agarase GM004974		Flammeovirga pacifica WPAGA1	ART28006.1
agarase GM004007		Flammeovirga pacifica WPAGA1	ART28002.1
agarase GM002050		Flammeovirga pacifica WPAGA1	ART27999.1
agarase GM001950		Flammeovirga pacifica WPAGA1	ART27996.1
agarase GM004902		Flammeovirga pacifica WPAGA1	ART28005.1
AgaP4383 (Aga4383)		Flammeovirga pacifica WPAGA1	AIA22721.1 ART27998.1
MY04_4831		Flammeovirga sp. MY04	ANQ52166.1
MY04_4220		Flammeovirga sp. MY04	ANQ51562.1
MY04_4227		Flammeovirga sp. MY04	ANQ51569.1
MY04_5525		Flammeovirga sp. MY04	ANQ52856.1
MY04_4543		Flammeovirga sp. MY04	ANQ51878.1
MY04_5527		Flammeovirga sp. MY04	ANQ52858.1
MY04_4226		Flammeovirga sp. MY04	ANQ51568.1
MY04_2555		Flammeovirga sp. MY04	ANQ49924.1
MY04_2971		Flammeovirga sp. MY04	ANQ50339.1
MY04_4098		Flammeovirga sp. MY04	ANQ51442.1
MY04_5524		Flammeovirga sp. MY04	ANQ52855.1
β-agarase		Flammeovirga sp. OC4	AJW82064.1
β-agarase (fragment)		Flammeovirga sp. OC4	AJW82063.1
β-agarase		Flammeovirga sp. OC4	AJW82059.1
β-agarase precursor		Flammeovirga sp. OC4	AJW82060.1
agarase B8 (AgaB8)		Flammeovirga yaeyamensis MY04 (CGMCC 2777)	ACY02047.1 ACZ97442.1	D0PR04
BN863_20910 (fragment)		Formosa agariphila KMM 3901 type strain: KMM 3901	CDF79803.1
BN863_20920 (fragment)		Formosa agariphila KMM 3901 type strain: KMM 3901	CDF79804.1
agarase		Gilvimarinus polysaccharolyticus	AEE61375.1
Glaag_3492		Glaciecola sp. 4H-3-7+YE-5	AEE24424.1
Mag101_05875		Microbulbifer agarilyticus GP101	AQQ67218.1
Mag101_05880		Microbulbifer agarilyticus GP101	AQQ67219.1
A3224_10245		Microbulbifer thermotolerans DAU221	AMX02903.1
A3224_09805		Microbulbifer thermotolerans DAU221	AMX02836.1
β-agarase (AgaO)	3.2.1.81	Microbulbifer thermotolerans JAMB-A94	BAD86832.1 BAK08903.1	Q5KTI5
MS130 (probable fragment)		Microscilla sp. PRE1	AAK62852.1 NP_116818.1	Q93PA1
MS109		Microscilla sp. PRE1	AAK62831.1 NP_116797.1	Q93PC0
MS115		Microscilla sp. PRE1	AAK62837.1 NP_116803.1	Q934I7
exo-type β-agarase (Aga1)	3.2.1.81	Paenibacillus sp. SSG-1	BAT46645.1 AML39432.1
PSMK_02610		Phycisphaera mikurensis NBRC 102666	BAM02420.1
PSMK_16240		Phycisphaera mikurensis NBRC 102666	BAM03783.1
PSMK_22240		Phycisphaera mikurensis NBRC 102666	BAM04383.1
PSMK_25430		Phycisphaera mikurensis NBRC 102666	BAM04702.1
BW723_05745		Polaribacter reichenbachii 6Alg 8T	APZ45829.1
BW723_03925 (fragment)		Polaribacter reichenbachii 6Alg 8T	APZ45497.1
BTO07_15880		Polaribacter sp. SA4-12	ARV16524.1
BTO07_15850		Polaribacter sp. SA4-12	ARV16955.1
BTO07_15875		Polaribacter sp. SA4-12	ARV16523.1
β-agarase II (AgrA;Patl_2341)	3.2.1.81	Pseudoalteromonas atlantica T6c	ABG40858.1 A32261 AAA25696.1	P13734 Q15TD0
Patl_0839		Pseudoalteromonas atlantica T6c	ABG39367.1	Q15XM1
Patl_1904		Pseudoalteromonas atlantica T6c	ABG40423.1	Q15UL5
D172_009435		Pseudoalteromonas sp. Bsw20308	ALQ08258.1
RB3421 (AgrA)		Rhodopirellula baltica SH 1	CAD73183.1 NP_865499.1	Q7TU03
endo-β-agarase C (AgaC;Sde_2650) (Aga86C)	3.2.1.81	Saccharophagus degradans 2-40	ABD81910.1	Q21HB9
β-agarase II / E (AgaE;Sde_2655) (Aga86E)	3.2.1.81	Saccharophagus degradans 2-40	ABD81915.1	Q21HB4
M5M_16865		Simiduia agarivorans SA1 = DSM 21679	AFV00504.1 AFV00504.2
M5M_16910 (probable fragment)		Simiduia agarivorans SA1 = DSM 21679	AFV00513.1 AFV00513.2
AXE80_01580		Wenyingzhuangia fucanilytica CZ1127	ANW95064.1
AXE80_01610		Wenyingzhuangia fucanilytica CZ1127	ANW95070.1
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