Glycoside Hydrolase Family 53

Activities in Familyendo-β-1,4-galactanase (EC 3.2.1.89).
Mechanism Retaining
ClanGH-A
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseGlu (experimental)
Catalytic Proton DonorGlu (experimental)
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (1256); Uniprot accession (173); PDB accession (12); 3D entries (5); cryst (0)
| 1 | ... | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ADU70_1643   Pediococcus damnosus TMW 2.1533 AMV63121.1    
 ADU71_0824 (fragment)   Pediococcus damnosus TMW 2.1534 AMV64732.1    
 ADU72_1052   Pediococcus damnosus TMW 2.1535 AMV66987.1    
 ADU73_1007   Pediococcus damnosus TMW 2.1536 AMV69411.1    
 AQ505_16190   Pedobacter sp. PACM 27299 ALL06892.1    
 ING2E5A_2984   Petrimonas mucosa DSM 28695 SCM59778.1    
 PSMK_10010   Phycisphaera mikurensis NBRC 102666 BAM03160.1    
 PSMK_23450   Phycisphaera mikurensis NBRC 102666 BAM04504.1    
 L21SP3_01104 (GanB)   Phycisphaerae bacterium L21-RPul-D3 AQQ09301.1    
 STSP1_00992 (GanB)   Phycisphaerae bacterium ST-PulAB-D4 ARN56606.1    
 AUC31_06495   Planococcus rifietoensis M8 ALS74893.1    
 CIK06_00890   Plantactinospora sp. KBS50 ASW53052.1    
 SAMN04487762_0929   Polaribacter sp. Hel1_33_78 SDT96228.1    
 SAMN04487762_0966   Polaribacter sp. Hel1_33_78 SDT96685.1    
 SAMN05216503_0257   Polaribacter sp. KT25b SDR67248.1    
 MED152_09155   Polaribacter sp. MED152 EAQ42879.1    
 BTO07_11565   Polaribacter sp. SA4-12 ARV15734.1    
 LPB03_05615   Polaribacter vadi LPB0003 AOW16971.1    
 LPB03_05610   Polaribacter vadi LPB0003 AOW16970.1    
 Prede_1124   Prevotella dentalis DSM 3688 AGB28452.1    
 Prede_1577   Prevotella dentalis DSM 3688 AGB28883.1    
 HMPREF9137_1868   Prevotella denticola F0289 AEA20827.1    
 PRU_2676   Prevotella ruminicola 23 ADE81415.1 D5EXI0  
 PRU_1929   Prevotella ruminicola 23 ADE83762.1 D5EUA5  
 PSM36_0174   Proteiniphilum saccharofermentans SCD19010.1    
 PSM36_0497   Proteiniphilum saccharofermentans SCD19327.1    
 PSM36_0174   Proteiniphilum saccharofermentans SCD19010.1    
 PSM36_0497   Proteiniphilum saccharofermentans SCD19327.1    
 SAMN04489743_0758   Pseudarthrobacter equi IMMIB L-1606 SDS74805.1    
 Pedsa_3162   Pseudopedobacter saltans DSM 12145 ADY53698.1    
 AJ81_06985   Pseudothermotoga hypogea DSM 11164 = NBRC 106472 AJC73971.1    
 Tlet_0913   Pseudothermotoga lettingae TMO ABV33479.1 A8F5P5  
 Rahaq2_1653   Rahnella aquatilis CIP 78.65 = ATCC 33071 AEX51528.1    
 Q7S_07685   Rahnella aquatilis HX2 AFE57779.1    
 Rahaq_1589   Rahnella sp. Y9602 ADW73211.1    
 AN237_12185   Raoultella ornithinolytica 18 AOO57232.1    
 HY59_05110   Raoultella ornithinolytica A14 ANZ04775.1    
 RORB6_13070   Raoultella ornithinolytica B6 AGJ87295.1    
 BK817_06640   Raoultella ornithinolytica MG APB04667.1    
 CA210_03000   Raoultella ornithinolytica Ro24724 ASI57276.1    
 TE10_07900   Raoultella ornithinolytica S12 AJF71994.1    
 AWN76_017855   Rhodothermaceae bacterium RA ARA94834.1    
 Rmar_1480   Rhodothermus marinus DSM 4252 ACY48367.1 D0MIQ9  
 Rhom172_1538   Rhodothermus marinus SG0.5JP17-172 AEN73458.1    
 RD2015_2670   Roseateles depolymerans KCTC 42856 ALV07135.1    
 RD2015_2674   Roseateles depolymerans KCTC 42856 ALV07139.1    
 RHOM_10755 (fragment)   Roseburia hominis A2-183 AEN97260.1    
 RHOM_10945   Roseburia hominis A2-183 AEN97298.1    
 RHOM_06170   Roseburia hominis A2-183 AEN96353.1    
 RHOM_10730 (fragment)   Roseburia hominis A2-183 AEN97255.1    
 RHOM_10735 (fragment)   Roseburia hominis A2-183 AEN97256.1    
 ROI_37990   Roseburia intestinalis M50/1 CBL10573.1 D4KJP3  
 ROI_33860 (fragment)   Roseburia intestinalis M50/1 CBL10224.1 D4KTM2  
 RO1_26490   Roseburia intestinalis XB6B4 CBL13099.1 D4L0F9  
 DC20_02355   Rufibacter tibetensis 1351 ALI98029.1    
 AD2_00861   Ruminiclostridium thermocellum AD2 ALX07856.1    
 endo-β-1,4-galactanase (Cthe_1400) 3.2.1.89 Ruminiclostridium thermocellum ATCC 27405 ABN52631.1 A3DFA2  
 Clo1313_0849   Ruminiclostridium thermocellum DSM 1313 ADU73918.1    
 LQRI_0860   Ruminiclostridium thermocellum DSM 2360 LQRI ANV75601.1    
 Rumal_2740   Ruminococcus albus 7 = DSM 20455 ADU23209.1    
 Sde_0683 (Arg53A)   Saccharophagus degradans 2-40 ABD79945.1 Q21MY4  
 Sde_2827 (Arg53C)   Saccharophagus degradans 2-40 ABD82084.1 Q21GU5  
 Sde_3710 (Arg53B)   Saccharophagus degradans 2-40 ABD82965.1 Q21EB4  
 galactanase (fragment)   Salipaludibacillus agaradhaerens AC13 (DSM 8721) AAO31372.1    
 Sked_14870   Sanguibacter keddieii DSM 10542 ACZ21423.1 D1BFR2  
 SELR_04260   Selenomonas ruminantium subsp. lactilytica TAM6421 BAL82134.1    
 ADP73_11945   Serratia plymuthica 3Re4-18 ANJ98613.1    
 ADP72_24295   Serratia plymuthica 3Rp8 ANJ95944.1    
 SOD_c22090   Serratia plymuthica 4Rx13 AGO55183.1    
 SerAS9_2350   Serratia plymuthica AS9 AEF45476.1    
 Q5A_012360 (GanB)   Serratia plymuthica PRI-2C ANS42925.1    
 M621_12145   Serratia plymuthica S13 AGP44467.1    
 sch_12930   Serratia plymuthica V4 AHY07415.1    
 SerAS12_2350   Serratia sp. AS12 AEF50427.1    
 SerAS13_2351   Serratia sp. AS13 AEG28134.1    
 Ser39006_3279   Serratia sp. ATCC 39006 AGU88494.1    
 sce6753   Sorangium cellulosum So ce56 CAN96922.1 A9GTA6  
 SCE1572_29050   Sorangium cellulosum So0157-2 AGP38166.1    
 BV902_20880   Sphingobacterium sp. B29 APU98489.1    
 BN1088_1432269   Sphingobacterium sp. PM2-P1-29 CDS96194.1    
 BSY17_3177   Sphingobium sp. RAC03 AOF95136.1    
 AWL63_12880   Sphingomonas panacis DCY99 AOH86753.1    
 NX02_22855   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE56189.1    
 NX02_23095   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE56235.1    
 BXU08_17955   Sphingomonas sp. LM7 AQR75294.1    
 STHERM_c03950   Spirochaeta thermophila DSM 6192 ADN01367.1 E0RPQ3  
 Spith_0360   Spirochaeta thermophila DSM 6578 AEJ60645.1    
 SCLARK_00747   Spiroplasma clarkii CN-5 ARU91394.1    
 STURON_00439   Spiroplasma turonicum Tab4c AKU79685.1
ALX70705.1
   
 Slin_6460   Spirosoma linguale DSM 74 ADB42417.1 D2QUD5  
 SAIN_1264   Streptococcus anginosus C1051 AGU81998.1    
 SanJ4206_1290c   Streptococcus anginosus J4206 ANW85541.1    
 SanJ4211_1313c   Streptococcus anginosus J4211 ALL03400.1    
 SGGB_0233   Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 BAK27130.1    
 SGGBAA2069_c02070 (YvfO)   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 CBZ47379.1    
 BTR42_00970   Streptococcus gallolyticus subsp. gallolyticus DSM 16831 AQP41197.1    
 GALLO_0189   Streptococcus gallolyticus UCN34 CBI12681.1 D3HC68  
 SGPB_0176   Streptococcus pasteurianus ATCC 43144 BAK29312.1    
 SAV1324   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC69034.1
NP_822499.1
   
 SBI_00548   Streptomyces bingchenggensis BCW-1 ADI03669.1 D7C0H8  
Top


Last update: 2017-10-09 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille