Glycoside Hydrolase Family 43 / Subf 4

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (552); Uniprot accession (83); PDB accession (14); 3D entries (5); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 KNP414_05087   Paenibacillus mucilaginosus KNP414 AEI43611.1     4
 KNP414_05325 (YxiA)   Paenibacillus mucilaginosus KNP414 AEI43849.1     4
 CD191_07765   Paenibacillus odorifer CBA7130 AWV32517.1     4
 CD191_12655   Paenibacillus odorifer CBA7130 AWV33399.1     4
 CD191_07560   Paenibacillus odorifer CBA7130 AWV32481.1     4
 PODO_12870   Paenibacillus odorifer DSM 15391 AIQ74065.1     4
 PODO_07655   Paenibacillus odorifer DSM 15391 AIQ73134.1     4
 VK72_09220   Paenibacillus polymyxa ATCC 15970 APQ58915.1     4
 VK72_01515   Paenibacillus polymyxa ATCC 15970 APQ57530.1     4
 LK13_21730   Paenibacillus polymyxa CF05 AIY11003.1     4
 LK13_14475   Paenibacillus polymyxa CF05 AIY09712.1     4
 LK13_11765   Paenibacillus polymyxa CF05 AIY09211.1     4
 X809_01270   Paenibacillus polymyxa CR1 AHC17987.1     4
 X809_09530   Paenibacillus polymyxa CR1 AHC19451.1     4
 X809_26200   Paenibacillus polymyxa CR1 AHC22334.1
AIW42185.1
    4
 PPE_00289   Paenibacillus polymyxa E681 ADM68171.1 E0RBZ6   4
 PPE_01763   Paenibacillus polymyxa E681 ADM69599.1
ADM69599.2
E0RES1   4
 C1A50_0299   Paenibacillus polymyxa HY96-2 AUS24538.1     4
 C1A50_1884   Paenibacillus polymyxa HY96-2 AUS26057.1     4
 C1A50_5043   Paenibacillus polymyxa HY96-2 AUS29153.1     4
 AOU00_21990   Paenibacillus polymyxa J AOK92245.1     4
 AOU00_14200   Paenibacillus polymyxa J AOK90881.1     4
 AOU00_11385   Paenibacillus polymyxa J AOK90376.1     4
 PPM_1764 (Yxia3)   Paenibacillus polymyxa M1 CCC84701.1     4
 PPM_0319 (Yxia1)   Paenibacillus polymyxa M1 CCC83256.1     4
 PPM_4814 (Yxia5)   Paenibacillus polymyxa M1 CCI71621.1     4
 RE92_03035   Paenibacillus polymyxa Sb3-1 AJE50101.1     4
 RE92_10220   Paenibacillus polymyxa Sb3-1 AJE51384.1     4
 RE92_13035   Paenibacillus polymyxa Sb3-1 AJE51900.1     4
 PPSC2_24245 (Yxia5)   Paenibacillus polymyxa SC2 ADO59111.2     4
 PPSC2_c0344   Paenibacillus polymyxa SC2 ADO54328.1 E3ECI5   4
 PPSC2_c1961   Paenibacillus polymyxa SC2 ADO55933.1 E3EIR4   4
 PPSQR21_018430   Paenibacillus polymyxa SQR-21 SQR21 AHM65491.1     4
 PPSQR21_003020 (XynB)   Paenibacillus polymyxa SQR-21 SQR21 AHM64013.1     4
 PPSQR21_049120   Paenibacillus polymyxa SQR-21 SQR21 AHM68496.1     4
 PPYC1_01375   Paenibacillus polymyxa YC0136 APB69105.1     4
 PPYC1_15035   Paenibacillus polymyxa YC0136 APB71601.1     4
 PPYC1_22750   Paenibacillus polymyxa YC0136 APB73007.1     4
 PPYC2_17135   Paenibacillus polymyxa YC0573 APB76580.1     4
 PPYC2_25105   Paenibacillus polymyxa YC0573 APB78002.1     4
 endo-α-1,5-L-arabinanase (AbnZ3;YxiA3) 3.2.1.99 Paenibacillus polymyxa Z6 AHA50064.1     4
 endo-α-1,5-L-arabinanase (AbnZ2;Yxia1) 3.2.1.99 Paenibacillus polymyxa Z6 AHA50063.1     4
 PRIO_3076 (YxiA)   Paenibacillus riograndensis SBR5 CQR55479.1     4
 IJ21_00610   Paenibacillus sp. 32O-W ALS25516.1     4
 BBD42_02815   Paenibacillus sp. BIHB4019 ANY65515.1     4
 DCC85_01565   Paenibacillus sp. CAA11 AWB43047.1     4
 H70357_15655   Paenibacillus sp. FSL H7-0357 AIQ17947.1     4
 H70737_12445   Paenibacillus sp. FSL H7-0737 AIQ23598.1     4
 P40081_16565   Paenibacillus sp. FSL P4-0081 AIQ29590.1     4
 R50345_13055   Paenibacillus sp. FSL R5-0345 AIQ35460.1     4
 R50912_15485   Paenibacillus sp. FSL R5-0912 AIQ41277.1     4
 R50912_08505   Paenibacillus sp. FSL R5-0912 AIQ40070.1     4
 R70723_08595   Paenibacillus sp. FSL R7-0273 AIQ45930.1     4
 R70723_14150   Paenibacillus sp. FSL R7-0273 AIQ46891.1     4
 R70331_13605   Paenibacillus sp. FSL R7-0331 AIQ52444.1     4
 R70331_07550   Paenibacillus sp. FSL R7-0331 AIQ51381.1     4
 ASL14_00810   Paenibacillus sp. IHB B 3084 ALP34930.1     4
 ASL14_10335   Paenibacillus sp. IHB B 3084 ALP36497.1     4
 ASL14_02110   Paenibacillus sp. IHB B 3084 ALP35152.1     4
 Pjdr2_4105   Paenibacillus sp. JDR-2 ACT02734.1 C6D6G1   4
 C0638_09035   Paenibacillus sp. lzh-N1 AUO06670.1     4
 C0638_06220   Paenibacillus sp. lzh-N1 AUO06158.1     4
 C0638_23900   Paenibacillus sp. lzh-N1 AUO09362.1     4
 GYMC10_0521   Paenibacillus sp. Y412MC10 ACX62824.1 D3EBL1   4
 PSTEL_12795   Paenibacillus stellifer DSM 14472 AIQ63835.1     4
 HPL003_09120   Paenibacillus terrae HPL-003 AET58587.1     4
 HPL003_17305   Paenibacillus terrae HPL-003 AET60205.1     4
 HPL003_18780   Paenibacillus terrae HPL-003 AET60498.1     4
 BS614_09895   Paenibacillus xylanexedens PAMC 22703 APO48157.1     4
 BS614_17555   Paenibacillus xylanexedens PAMC 22703 APO45646.1     4
 Prede_1294   Prevotella dentalis DSM 3688 AGB28616.1     4
 PRU_2672   Prevotella ruminicola 23 ADE81768.1 D5EXH6   4
 ORF (fragment)   Prevotella sp. Sc00026 AGH13983.1     4
 D0907_16235   Pseudoalteromonas donghaensis HJ51 AXV66738.1     4
 endo-arabinanase (Abn;Tth Abn;Theth_1128) 3.2.1.99 Pseudothermotoga thermarum DSM 5069 AEH51204.1     4
 RHOM_03155   Roseburia hominis A2-183 AEN95753.1     4
 ROI_16580   Roseburia intestinalis M50/1 CBL08764.1 D4KPG2   4
 RO1_38020   Roseburia intestinalis XB6B4 CBL14030.1 D4L340   4
 DC20_10820   Rufibacter tibetensis strain 1351 ALI99372.1     4
 Rumal_1947   Ruminococcus albus 7 = DSM 20455 ADU22440.1 E0LEI1   4
 Rumal_1912   Ruminococcus albus 7 = DSM 20455 ADU22406.1 E0L4U3   4
 Xyl43A (Xyl43A)   Ruminococcus albus 8 AEE64773.1
ZP_08160455.1
    4
 arabinanase (GH43D;RUM_09280) (Ara43D) 3.2.1.99 Ruminococcus champanellensis 18P13 = JCM 17042 CBL17100.1 D4LBV5   4
 Sde_2809 (Arb43A)   Saccharophagus degradans 2-40 ABD82066.1 Q21GW3   4
 Sde_3317 (Gly43M)   Saccharophagus degradans 2-40 ABD82572.1 Q21FF7   4
 Sbal223_2161   Shewanella baltica OS223 ACK46663.1 B8EEQ5   4
 CF168_10275   Shewanella bicestrii JAB-1 ASK69223.1     4
 Sput200_1963   Shewanella putrefaciens 200 ADV54419.1     4
 Sputcn32_2047   Shewanella putrefaciens CN-32 ABP75768.1 A4Y735   4
 SPWS13_0401   Shewanella putrefaciens WS13 AVV82252.1     4
 Shewana3_2086   Shewanella sp. ANA-3 ABK48316.1 A0KWZ7   4
 CEQ32_04520   Shewanella sp. FDAARGOS_354 AVL27110.1     4
 Shewmr4_1999   Shewanella sp. MR-4 ABI39072.1 Q0HIP5   4
 Shewmr7_1976   Shewanella sp. MR-7 ABI42965.1 Q0HV90   4
 Sputw3181_1965   Shewanella sp. W3-18-1 ABM24800.1 A1RJF5   4
 STHERM_c14690   Spirochaeta thermophila DSM 6192 ADN02409.1 E0RTN4   4
 STHERM_c14730   Spirochaeta thermophila DSM 6192 ADN02413.1 E0RTN8   4
 Spith_0752   Spirochaeta thermophila DSM 6578 AEJ61029.1     4
 C1A40_16160   Tamlana sp. UJ94 AUS06879.1     4
 TERTU_1485   Teredinibacter turnerae T7901 ACR12221.1 C5BT64   4
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