Glycoside Hydrolase Family 43 / Subf 4

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (537); Uniprot accession (83); PDB accession (14); 3D entries (5); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Clocel_2536   Clostridium cellulovorans 743B ADL52248.1 D9SQP2   4
 Clocel_2570   Clostridium cellulovorans 743B ADL52282.1 D9SQS6   4
 Clocel_3275   Clostridium cellulovorans 743B ADL52958.1 D9SUY3   4
 Clocl_1869   [Clostridium] clariflavum DSM 19732 AEV68477.1     4
 A7L45_17900   Clostridium estertheticum subsp. estertheticum DSM 8809 APC41808.1     4
 Cspa_c42180   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF57971.1     4
 Cspa_c56740   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF59399.1     4
 CLSAP_39750   Clostridium saccharoperbutylacetonicum N1-504 AQR96651.1     4
 CSTERLE_05230   [Clostridium] stercorarium subsp. leptospartum DSM 9219 ANX01026.1     4
 Cst_c11150   [Clostridium] stercorarium subsp. stercorarium DSM 8532 AGI39137.1
AGC68111.1
    4
 CSTERTH_05275   [Clostridium] stercorarium subsp. thermolacticum DSM 2910 ANW98492.1     4
 B7495_01940   Cryobacterium sp. LW097 ASD21015.1     4
 AAM4_0515   Desulfitobacterium hafniense CED90410.1     4
 DICTH_1628   Dictyoglomus thermophilum H-6-12 ACI19803.1 B5YAH2   4
 Dtur_1729   Dictyoglomus turgidum DSM 6724 ACK43001.1 B8E3C7   4
 FH5T_02100   Draconibacterium orientale FH5 AHW58775.1     4
 Echvi_0519   Echinicola vietnamensis DSM 17526 AGA76803.1     4
 ECBG_01573   Enterococcus casseliflavus EC20 EEV39304.1     4
 ECBG_01577   Enterococcus casseliflavus EC20 EEV39308.2     4
 CWE29_12445   Enterococcus faecium LS170308 AUC73836.1     4
 CWE29_12430   Enterococcus faecium LS170308 AUC73833.1     4
 UB18_12425   Enterococcus faecium UW8175 AMP62201.1     4
 UB18_12440   Enterococcus faecium UW8175 AMP62308.1     4
 AL523_07375   Enterococcus gallinarum FDAARGOS_163 AMG49603.1     4
 AL523_07395   Enterococcus gallinarum FDAARGOS_163 AMG49607.1
AMG49607.2
    4
 CO692_10265   Enterococcus gallinarum FDAARGOS_375 ATF72454.1     4
 CO692_10245   Enterococcus gallinarum FDAARGOS_375 ATF72450.1     4
 CXM95_02375   Enterococcus sp. CR-Ec1 AUJ84351.1     4
 A6C57_01760   Fibrella sp. ES10-3-2-2 ARK09144.1     4
 FLA_1425   Filimonas lacunae NBRC 104114 BAV05418.1     4
 D770_14225   Flammeovirgaceae bacterium 311 AHM61099.1     4
 D770_14250   Flammeovirgaceae bacterium 311 AHM61104.1     4
 BIW12_00235   Flavobacterium commune PK15 AOZ97990.1     4
 A0V43_06890   Geobacillus sp. JS12 AMQ20689.1     4
 GYMC52_1858   Geobacillus sp. Y412MC52 ADU94280.1 C3J346   4
 GYMC61_2728   Geobacillus sp. Y412MC61 ACX79310.1 C9RT65   4
 endo-α-1,5-L-arabinanase (AbnA) (extracellular) 3.2.1.99 Geobacillus stearothermophilus T-6 NCIMB 40222 ACE73680.1 B3EYN2 5HO0[A]
5HO2[A]
5HO9[A,B]
5HOF[A]
5HP6[A]
4
 AbnA   Geobacillus thermodenitrificans T81 ATG84585.1     4
 orf681   Gramella forsetii KT0803 CAL65668.1 A0LZ73   4
 C7S20_13665   Gramella sp. SH35 AVR46222.1     4
 Halha_1717   Halobacteroides halobius DSM 5150 AGB41654.1     4
 Halha_1722   Halobacteroides halobius DSM 5150 AGB41659.1     4
 Halha_1723   Halobacteroides halobius DSM 5150 AGB41660.1     4
 Halha_1724   Halobacteroides halobius DSM 5150 AGB41661.1     4
 I598_1455   Isoptericola dokdonensis DS-3 ANC31011.1     4
 Isova_0798   Isoptericola variabilis 225 AEG43584.1     4
 Isova_1128   Isoptericola variabilis 225 AEG43903.1     4
 CNX70_02295   Janthinobacterium svalbardensis PAMC 27463 ATD59147.1     4
 Jden_1623   Jonesia denitrificans DSM 20603 ACV09271.1 C7R5J8   4
 Jden_1622   Jonesia denitrificans DSM 20603 ACV09270.1 C7R5J7   4
 Jden_0510   Jonesia denitrificans DSM 20603 ACV08174.1 C7R0B5   4
 CEP80_10215   Jonesia denitrificans FDAARGOS_301 ASE09462.1     4
 CEP80_02655   Jonesia denitrificans FDAARGOS_301 ASE08152.1     4
 CEP80_10220   Jonesia denitrificans FDAARGOS_301 ASE10152.2
ASE10152.1
    4
 NCTC10816_01673 (Abna_3)   Jonesia denitrificans NCTC10816 SQH21510.1     4
 NCTC10816_01674 (Abna_4)   Jonesia denitrificans NCTC10816 SQH21511.1     4
 NCTC10816_00523 (Abna_1)   Jonesia denitrificans NCTC10816 SQH20155.1     4
 AT746_16805   Lacimicrobium alkaliphilum YelD216 ALS99762.1     4
 C9I28_18900   Massilia armeniaca ZMN-3 AVR97480.1     4
 AM586_22280   Massilia sp. WG5 ALK99781.1
ALK99781.2
    4
 MPTP_0495   Melissococcus plutonius ATCC 35311 BAK20972.1     4
 MPTP_1200+MPTP_1199   Melissococcus plutonius ATCC 35311 BAK21650.1
BAK21651.1
    4
 DAT561_0756   Melissococcus plutonius DAT561 BBC60873.1     4
 DAT561_1410 (fragment)   Melissococcus plutonius DAT561 BBC61509.1     4
 MPD5_1418 (fragment)   Melissococcus plutonius DAT561 BAL62623.1     4
 MPD5_0756   Melissococcus plutonius DAT561 BAL61999.1     4
 MEPL_c004330   Melissococcus plutonius S1 AIM24586.1     4
 SAMN05216490_1618   Mucilaginibacter mallensis MP1X4 SDS68958.1     4
 Oter_1393   Opitutus terrae PB90-1 ACB74678.1 B1ZS02   4
 PBOR_16305   Paenibacillus borealis DSM 13188 AIQ58326.1     4
 AR543_08385   Paenibacillus bovis BD3526 ANF96022.1     4
 AR543_04140   Paenibacillus bovis BD3526 ANF95284.1     4
 AR543_03790   Paenibacillus bovis BD3526 ANF95234.1     4
 LPB68_12845   Paenibacillus crassostreae LPB0068 AOZ93014.1     4
 B9T62_02210   Paenibacillus donghaensis KCTC 13049 ASA19728.1     4
 A3958_11945   Paenibacillus glucanolyticus 5162 ANA80638.1     4
 C7121_03560   Paenibacillus glucanolyticus W10507 AVV55293.1     4
 PGRAT_14130   Paenibacillus graminis DSM 15220 AIQ68633.1     4
 BBD41_12080   Paenibacillus ihbetae IHBB 9852 ANY73258.1     4
 B4V02_23530   Paenibacillus kribbensis AM49 ASR49440.1     4
 B4V02_15980   Paenibacillus kribbensis AM49 ASR48088.1     4
 PM3016_4708   Paenibacillus mucilaginosus 3016 AFC31452.1     4
 PM3016_4492   Paenibacillus mucilaginosus 3016 AFC31253.1     4
 B2K_24410   Paenibacillus mucilaginosus K02 AFH63791.1
AFK65226.1
    4
 B2K_23270   Paenibacillus mucilaginosus K02 AFH63579.1
AFK65323.1
    4
 KNP414_05087   Paenibacillus mucilaginosus KNP414 AEI43611.1     4
 KNP414_05325 (YxiA)   Paenibacillus mucilaginosus KNP414 AEI43849.1     4
 CD191_07765   Paenibacillus odorifer CBA7130 AWV32517.1     4
 CD191_12655   Paenibacillus odorifer CBA7130 AWV33399.1     4
 CD191_07560   Paenibacillus odorifer CBA7130 AWV32481.1     4
 PODO_12870   Paenibacillus odorifer DSM 15391 AIQ74065.1     4
 PODO_07655   Paenibacillus odorifer DSM 15391 AIQ73134.1     4
 VK72_09220   Paenibacillus polymyxa ATCC 15970 APQ58915.1     4
 VK72_01515   Paenibacillus polymyxa ATCC 15970 APQ57530.1     4
 LK13_21730   Paenibacillus polymyxa CF05 AIY11003.1     4
 LK13_14475   Paenibacillus polymyxa CF05 AIY09712.1     4
 LK13_11765   Paenibacillus polymyxa CF05 AIY09211.1     4
 X809_01270   Paenibacillus polymyxa CR1 AHC17987.1     4
 X809_09530   Paenibacillus polymyxa CR1 AHC19451.1     4
 X809_26200   Paenibacillus polymyxa CR1 AHC22334.1
AIW42185.1
    4
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