Glycoside Hydrolase Family 43 / Subf 4

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (474); Uniprot accession (83); PDB accession (14); 3D entries (5); cryst (0)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Halha_1717   Halobacteroides halobius DSM 5150 AGB41654.1     4
 Halha_1722   Halobacteroides halobius DSM 5150 AGB41659.1     4
 Halha_1723   Halobacteroides halobius DSM 5150 AGB41660.1     4
 Halha_1724   Halobacteroides halobius DSM 5150 AGB41661.1     4
 I598_1455   Isoptericola dokdonensis DS-3 ANC31011.1     4
 Isova_0798   Isoptericola variabilis 225 AEG43584.1     4
 Isova_1128   Isoptericola variabilis 225 AEG43903.1     4
 CNX70_02295   Janthinobacterium svalbardensis PAMC 27463 ATD59147.1     4
 Jden_1623   Jonesia denitrificans DSM 20603 ACV09271.1 C7R5J8   4
 Jden_1622   Jonesia denitrificans DSM 20603 ACV09270.1 C7R5J7   4
 Jden_0510   Jonesia denitrificans DSM 20603 ACV08174.1 C7R0B5   4
 CEP80_10215   Jonesia denitrificans FDAARGOS_301 ASE09462.1     4
 CEP80_02655   Jonesia denitrificans FDAARGOS_301 ASE08152.1     4
 CEP80_10220   Jonesia denitrificans FDAARGOS_301 ASE10152.1     4
 AT746_16805   Lacimicrobium alkaliphilum YelD216 ALS99762.1     4
 AM586_22280   Massilia sp. WG5 ALK99781.1     4
 MPTP_0495   Melissococcus plutonius ATCC 35311 BAK20972.1     4
 MPTP_1200+MPTP_1199   Melissococcus plutonius ATCC 35311 BAK21650.1
BAK21651.1
    4
 MPD5_1418 (fragment)   Melissococcus plutonius DAT561 BAL62623.1     4
 MPD5_0756   Melissococcus plutonius DAT561 BAL61999.1     4
 MEPL_c004330   Melissococcus plutonius S1 AIM24586.1     4
 SAMN05216490_1618   Mucilaginibacter mallensis MP1X4 SDS68958.1     4
 Oter_1393   Opitutus terrae PB90-1 ACB74678.1 B1ZS02   4
 PBOR_16305   Paenibacillus borealis DSM 13188 AIQ58326.1     4
 AR543_08385   Paenibacillus bovis BD3526 ANF96022.1     4
 AR543_04140   Paenibacillus bovis BD3526 ANF95284.1     4
 AR543_03790   Paenibacillus bovis BD3526 ANF95234.1     4
 LPB68_12845   Paenibacillus crassostreae LPB0068 AOZ93014.1     4
 B9T62_02210   Paenibacillus donghaensis KCTC 13049 ASA19728.1     4
 A3958_11945   Paenibacillus glucanolyticus 5162 ANA80638.1     4
 PGRAT_14130   Paenibacillus graminis DSM 15220 AIQ68633.1     4
 BBD41_12080   Paenibacillus ihbetae IHBB 9852 ANY73258.1     4
 B4V02_23530   Paenibacillus kribbensis AM49 ASR49440.1     4
 B4V02_15980   Paenibacillus kribbensis AM49 ASR48088.1     4
 PM3016_4708   Paenibacillus mucilaginosus 3016 AFC31452.1     4
 PM3016_4492   Paenibacillus mucilaginosus 3016 AFC31253.1     4
 B2K_24410   Paenibacillus mucilaginosus K02 AFH63791.1
AFK65226.1
    4
 B2K_23270   Paenibacillus mucilaginosus K02 AFH63579.1
AFK65323.1
    4
 KNP414_05087   Paenibacillus mucilaginosus KNP414 AEI43611.1     4
 KNP414_05325 (YxiA)   Paenibacillus mucilaginosus KNP414 AEI43849.1     4
 PODO_12870   Paenibacillus odorifer DSM 15391 AIQ74065.1     4
 PODO_07655   Paenibacillus odorifer DSM 15391 AIQ73134.1     4
 VK72_09220   Paenibacillus polymyxa ATCC 15970 APQ58915.1     4
 VK72_01515   Paenibacillus polymyxa ATCC 15970 APQ57530.1     4
 LK13_21730   Paenibacillus polymyxa CF05 AIY11003.1     4
 LK13_14475   Paenibacillus polymyxa CF05 AIY09712.1     4
 LK13_11765   Paenibacillus polymyxa CF05 AIY09211.1     4
 X809_01270   Paenibacillus polymyxa CR1 AHC17987.1     4
 X809_09530   Paenibacillus polymyxa CR1 AHC19451.1     4
 X809_26200   Paenibacillus polymyxa CR1 AHC22334.1
AIW42185.1
    4
 PPE_00289   Paenibacillus polymyxa E681 ADM68171.1 E0RBZ6   4
 PPE_01763   Paenibacillus polymyxa E681 ADM69599.1
ADM69599.2
E0RES1   4
 AOU00_21990   Paenibacillus polymyxa J AOK92245.1     4
 AOU00_14200   Paenibacillus polymyxa J AOK90881.1     4
 AOU00_11385   Paenibacillus polymyxa J AOK90376.1     4
 PPM_1764 (Yxia3)   Paenibacillus polymyxa M1 CCC84701.1     4
 PPM_0319 (Yxia1)   Paenibacillus polymyxa M1 CCC83256.1     4
 PPM_4814 (Yxia5)   Paenibacillus polymyxa M1 CCI71621.1     4
 RE92_03035   Paenibacillus polymyxa Sb3-1 AJE50101.1     4
 RE92_10220   Paenibacillus polymyxa Sb3-1 AJE51384.1     4
 RE92_13035   Paenibacillus polymyxa Sb3-1 AJE51900.1     4
 PPSC2_24245 (Yxia5)   Paenibacillus polymyxa SC2 ADO59111.2     4
 PPSC2_c0344   Paenibacillus polymyxa SC2 ADO54328.1 E3ECI5   4
 PPSC2_c1961   Paenibacillus polymyxa SC2 ADO55933.1 E3EIR4   4
 PPSQR21_018430   Paenibacillus polymyxa SQR-21 SQR21 AHM65491.1     4
 PPSQR21_003020 (XynB)   Paenibacillus polymyxa SQR-21 SQR21 AHM64013.1     4
 PPSQR21_049120   Paenibacillus polymyxa SQR-21 SQR21 AHM68496.1     4
 PPYC1_01375   Paenibacillus polymyxa YC0136 APB69105.1     4
 PPYC1_15035   Paenibacillus polymyxa YC0136 APB71601.1     4
 PPYC1_22750   Paenibacillus polymyxa YC0136 APB73007.1     4
 PPYC2_17135   Paenibacillus polymyxa YC0573 APB76580.1     4
 PPYC2_25105   Paenibacillus polymyxa YC0573 APB78002.1     4
 endo-α-1,5-L-arabinanase (AbnZ3;YxiA3) 3.2.1.99 Paenibacillus polymyxa Z6 AHA50064.1     4
 endo-α-1,5-L-arabinanase (AbnZ2;Yxia1) 3.2.1.99 Paenibacillus polymyxa Z6 AHA50063.1     4
 PRIO_3076 (YxiA)   Paenibacillus riograndensis SBR5 CQR55479.1     4
 IJ21_00610   Paenibacillus sp. 32O-W ALS25516.1     4
 BBD42_02815   Paenibacillus sp. BIHB4019 ANY65515.1     4
 H70357_15655   Paenibacillus sp. FSL H7-0357 AIQ17947.1     4
 H70737_12445   Paenibacillus sp. FSL H7-0737 AIQ23598.1     4
 P40081_16565   Paenibacillus sp. FSL P4-0081 AIQ29590.1     4
 R50345_13055   Paenibacillus sp. FSL R5-0345 AIQ35460.1     4
 R50912_15485   Paenibacillus sp. FSL R5-0912 AIQ41277.1     4
 R50912_08505   Paenibacillus sp. FSL R5-0912 AIQ40070.1     4
 R70723_08595   Paenibacillus sp. FSL R7-0273 AIQ45930.1     4
 R70723_14150   Paenibacillus sp. FSL R7-0273 AIQ46891.1     4
 R70331_13605   Paenibacillus sp. FSL R7-0331 AIQ52444.1     4
 R70331_07550   Paenibacillus sp. FSL R7-0331 AIQ51381.1     4
 ASL14_00810   Paenibacillus sp. IHB B 3084 ALP34930.1     4
 ASL14_10335   Paenibacillus sp. IHB B 3084 ALP36497.1     4
 ASL14_02110   Paenibacillus sp. IHB B 3084 ALP35152.1     4
 Pjdr2_4105   Paenibacillus sp. JDR-2 ACT02734.1 C6D6G1   4
 GYMC10_0521   Paenibacillus sp. Y412MC10 ACX62824.1 D3EBL1   4
 PSTEL_12795   Paenibacillus stellifer DSM 14472 AIQ63835.1     4
 HPL003_09120   Paenibacillus terrae HPL-003 AET58587.1     4
 HPL003_17305   Paenibacillus terrae HPL-003 AET60205.1     4
 HPL003_18780   Paenibacillus terrae HPL-003 AET60498.1     4
 BS614_09895   Paenibacillus xylanexedens PAMC 22703 APO48157.1     4
 BS614_17555   Paenibacillus xylanexedens PAMC 22703 APO45646.1     4
 Prede_1294   Prevotella dentalis DSM 3688 AGB28616.1     4
 PRU_2672   Prevotella ruminicola 23 ADE81768.1 D5EXH6   4
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