Glycoside Hydrolase Family 43 / Subf 4

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (474); Uniprot accession (83); PDB accession (14); 3D entries (5); cryst (0)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 BXY_15650   Bacteroides xylanisolvens XB1A CBK66687.1 D6CWY5   4
 BXY_15700   Bacteroides xylanisolvens XB1A CBK66691.1 D6CWY9   4
 Bcav_3292   Beutenbergia cavernae DSM 12333 ACQ81535.1 C5C1C5   4
 BA20089_00275   Bifidobacterium asteroides DSM 20089 ATO42180.1     4
 BA20089_00290   Bifidobacterium asteroides DSM 20089 ATO40791.1     4
 BAST_0202   Bifidobacterium asteroides PRL2011 AFU70799.1     4
 BAST_0205   Bifidobacterium asteroides PRL2011 AFU70802.1     4
 BDP_0236   Bifidobacterium dentium Bd1 ADB08917.1 D2Q7U6   4
 BBDE_0224   Bifidobacterium dentium JCM 1195 = DSM 20436 BAQ26218.1     4
 AH68_00850   Bifidobacterium kashiwanohense PV20-2 AIZ13804.1     4
 AH68_00855   Bifidobacterium kashiwanohense PV20-2 AIZ13805.1     4
 BL105A_1823   Bifidobacterium longum 105-A BAP84429.1     4
 BL105A_1822   Bifidobacterium longum 105-A BAP84428.1     4
 BLD_1543 (XynB2)   Bifidobacterium longum DJO10A ACD98988.1 B3DPC9   4
 BLD_1542 (XynB1)   Bifidobacterium longum DJO10A ACD98987.1 B3DPC8   4
 BL0182   Bifidobacterium longum NCC2705 AAN24036.1
NP_695400.1
Q8G7R5   4
 BL0183   Bifidobacterium longum NCC2705 AAN24037.1
NP_695401.1
Q8G7R4   4
 SAMN04489749_0239   Bifidobacterium longum Su859 SDO33018.1     4
 SAMN04489749_0238   Bifidobacterium longum Su859 SDO32990.1     4
 BL1206_1957   Bifidobacterium longum subsp. longum AH1206 AOP01989.1     4
 BL1206_1956   Bifidobacterium longum subsp. longum AH1206 AOP01988.1     4
 BBL306_1435   Bifidobacterium longum subsp. longum CCUG30698 ALO74964.1     4
 BBL306_1434   Bifidobacterium longum subsp. longum CCUG30698 ALO74963.1     4
 BIL_06070   Bifidobacterium longum subsp. longum F8 CBK70222.1 D6DCK1   4
 BIL_06080 (fragment)   Bifidobacterium longum subsp. longum F8 CBK70223.1 D6DCK2   4
 B8809_1758   Bifidobacterium longum subsp. longum NCIMB8809 ALO73428.1     4
 B8809_1759   Bifidobacterium longum subsp. longum NCIMB8809 ALO73429.1     4
 BBPC_0156   Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 BAR02834.1     4
 BBPC_0157   Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 BAR02835.1     4
 AH67_01080   Bifidobacterium pseudolongum PV8-2 AIZ15701.1     4
 AH67_01085   Bifidobacterium pseudolongum PV8-2 AIZ15702.1     4
 BBSC_0256   Bifidobacterium scardovii JCM 12489 = DSM 13734 BAQ30336.1     4
 BBSC_0257   Bifidobacterium scardovii JCM 12489 = DSM 13734 BAQ30337.1     4
 ADH70_007910   Blautia coccoides YL58 ASU28779.1     4
 A4V09_09475   Blautia sp. YL58 ANU75969.1     4
 Bfae_29390   Brachybacterium faecium DSM 4810 ACU86700.1 C7MA30   4
 CFK41_01650   Brachybacterium ginsengisoli DCY80 ATG53626.1     4
 CIY_12690 (fragment)   Butyrivibrio fibrisolvens 16/4 CBK74091.1 D4J1V2   4
 CIY_12700 (fragment)   Butyrivibrio fibrisolvens 16/4 CBK74092.1 D4J1V3   4
 endo-α-1,5-L-arabinanase (Abn43A)   Caldanaerobius polysaccharolyticus KMCJ AHN16715.1     4
 Calhy_1624   Caldicellulosiruptor hydrothermalis 108 ADQ07339.1 E4QC47   4
 Calhy_1629   Caldicellulosiruptor hydrothermalis 108 ADQ07344.1 E4QC52   4
 Calow_0925   Caldicellulosiruptor owensensis OL ADQ04491.1 E4Q6J2   4
 endo-α-1,5-L-arabinanase (Csac_1560) 3.2.1.99 Caldicellulosiruptor saccharolyticus DSM 8903 ABP67152.1 A4XJR7   4
 CAR_c02830 (AbnB)   Carnobacterium sp. 17-4 AEB29018.1     4
 Celf_0899   Cellulomonas fimi ATCC 484 AEE45036.1     4
 Celf_1482   Cellulomonas fimi ATCC 484 AEE45617.1     4
 Celgi_2558   Cellulomonas gilvus ATCC 13127 AEI13057.1     4
 CJA_0799 (Gly43E)   Cellvibrio japonicus Ueda107 ACE82940.1 B3PKP2   4
 CBR65_10705   Cellvibrio sp. PSBB006 ARU27856.1     4
 B0D95_19890   Cellvibrio sp. PSBB023 AQT62120.1     4
 CAC0577   Clostridium acetobutylicum ATCC 824 AAK78555.1
NP_347215.1
Q97LI4   4
 SMB_G0591 (YxiA)   Clostridium acetobutylicum DSM 1731 AEI33332.1     4
 CEA_G0590   Clostridium acetobutylicum EA 2018 ADZ19629.1     4
 α-L-arabinofuranosidase (Ara43A)   Clostridium cellulovorans BAV13109.1     4
 α-arabinofuranosidase (Ara43D)   Clostridium cellulovorans BAV13151.1     4
 ORF   Clostridium cellulovorans BAV13145.1     4
 β-xylosidase (Bxyl43B)   Clostridium cellulovorans BAV13112.1     4
 β-xylosidase (Bxyl43A)   Clostridium cellulovorans BAV13110.1     4
 ORF   Clostridium cellulovorans BAV13146.1     4
 ORF   Clostridium cellulovorans BAV13132.1     4
 Clocel_0407   Clostridium cellulovorans 743B ADL50185.1 D9SQB8   4
 Clocel_1009   Clostridium cellulovorans 743B ADL50773.1 D9STF7   4
 Clocel_2535   Clostridium cellulovorans 743B ADL52247.1 D9SQP1   4
 Clocel_2536   Clostridium cellulovorans 743B ADL52248.1 D9SQP2   4
 Clocel_2570   Clostridium cellulovorans 743B ADL52282.1 D9SQS6   4
 Clocel_3275   Clostridium cellulovorans 743B ADL52958.1 D9SUY3   4
 Clocl_1869   [Clostridium] clariflavum DSM 19732 AEV68477.1     4
 A7L45_17900   Clostridium estertheticum subsp. estertheticum DSM 8809 APC41808.1     4
 Cspa_c42180   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF57971.1     4
 Cspa_c56740   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF59399.1     4
 CLSAP_39750   Clostridium saccharoperbutylacetonicum N1-504 AQR96651.1     4
 CSTERLE_05230   [Clostridium] stercorarium subsp. leptospartum DSM 9219 ANX01026.1     4
 Cst_c11150   [Clostridium] stercorarium subsp. stercorarium DSM 8532 AGI39137.1
AGC68111.1
    4
 CSTERTH_05275   [Clostridium] stercorarium subsp. thermolacticum DSM 2910 ANW98492.1     4
 B7495_01940   Cryobacterium sp. LW097 ASD21015.1     4
 AAM4_0515   Desulfitobacterium hafniense CED90410.1     4
 DICTH_1628   Dictyoglomus thermophilum H-6-12 ACI19803.1 B5YAH2   4
 Dtur_1729   Dictyoglomus turgidum DSM 6724 ACK43001.1 B8E3C7   4
 FH5T_02100   Draconibacterium orientale FH5 AHW58775.1     4
 Echvi_0519   Echinicola vietnamensis DSM 17526 AGA76803.1     4
 ECBG_01573   Enterococcus casseliflavus EC20 EEV39304.1     4
 ECBG_01577   Enterococcus casseliflavus EC20 EEV39308.2     4
 UB18_12425   Enterococcus faecium UW8175 AMP62201.1     4
 UB18_12440   Enterococcus faecium UW8175 AMP62308.1     4
 AL523_07375   Enterococcus gallinarum FDAARGOS_163 AMG49603.1     4
 AL523_07395   Enterococcus gallinarum FDAARGOS_163 AMG49607.1     4
 CO692_10265   Enterococcus gallinarum FDAARGOS_375 ATF72454.1     4
 CO692_10245   Enterococcus gallinarum FDAARGOS_375 ATF72450.1     4
 A6C57_01760   Fibrella sp. ES10-3-2-2 ARK09144.1     4
 FLA_1425   Filimonas lacunae NBRC 104114 BAV05418.1     4
 D770_14225   Flammeovirgaceae bacterium 311 AHM61099.1     4
 D770_14250   Flammeovirgaceae bacterium 311 AHM61104.1     4
 BIW12_00235   Flavobacterium commune PK15 AOZ97990.1     4
 A0V43_06890   Geobacillus sp. JS12 AMQ20689.1     4
 GYMC52_1858   Geobacillus sp. Y412MC52 ADU94280.1 C3J346   4
 GYMC61_2728   Geobacillus sp. Y412MC61 ACX79310.1 C9RT65   4
 endo-α-1,5-L-arabinanase (AbnA) (extracellular) 3.2.1.99 Geobacillus stearothermophilus T-6 NCIMB 40222 ACE73680.1 B3EYN2 5HO0[A]
5HO2[A]
5HO9[A,B]
5HOF[A]
5HP6[A]
4
 AbnA   Geobacillus thermodenitrificans T81 ATG84585.1     4
 orf681   Gramella forsetii KT0803 CAL65668.1 A0LZ73   4
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