Glycoside Hydrolase Family 43 / Subf 34

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (325); Uniprot accession (53); PDB accession (2); 3D entries (2); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 SAMN04489716_1134   Actinoplanes derwentensis DSM 43941 SDS59335.1     34
 SAMN04489716_4629   Actinoplanes derwentensis DSM 43941 SDT57802.1     34
 AFR_15590   Actinoplanes friuliensis DSM 7358 AGZ41400.1     34
 AMIS_40680   Actinoplanes missouriensis 431 BAL89288.1     34
 L083_1708   Actinoplanes sp. N902-109 AGL15218.1     34
 ATC03_03575   Agromyces aureus AR33 ANJ25952.1     34
 CDL62_13700   Alkalitalea saponilacus DSM 24412 ASB51168.1     34
 CDL62_12335   Alkalitalea saponilacus DSM 24412 ASB49867.1     34
 B737_3304   Amycolatopsis mediterranei RB AGT83968.1     34
 RAM_17000   Amycolatopsis mediterranei S699 AEK41888.1
AFO76840.1
    34
 AMED_3343   Amycolatopsis mediterranei U32 ADJ45129.1 D8I5P0   34
 SD37_22090   Amycolatopsis orientalis B-37 ANN18073.1     34
 SAMN00777080_3806   Aquiflexum balticum DSM 16537 SMD45161.1     34
 A9P82_13060   Arachidicoccus sp. BS20 ANI90784.1     34
 CCB80_02740   Armatimonadetes bacterium Uphvl-Ar1 ARU40111.1     34
 CCB81_05205   Armatimonadetes bacterium Uphvl-Ar2 ARU45090.1     34
 Astex_2684   Asticcacaulis excentricus CB 48 ADU14325.1 C5SHJ4   34
 CGC64_05285   Bacteroides caccae ATCC 43185 ASM65427.1     34
 A4V03_19820   Bacteroides caecimuris I48 ANU59543.1     34
 A4V03_17785   Bacteroides caecimuris I48 ANU59177.1
ANU59177.2
    34
 A4V03_14165   Bacteroides caecimuris I48 ANU59852.1     34
 A4V03_01735   Bacteroides caecimuris I48 ARE60534.1     34
 A4V03_14160   Bacteroides caecimuris I48 ARE60508.1     34
 BcellWH2_01652 (Xynd_1)   Bacteroides cellulosilyticus WH2 ALJ58905.1     34
 BcellWH2_02003 (Xynd_2)   Bacteroides cellulosilyticus WH2 ALJ59248.1     34
 BcellWH2_04844 (Xynb_11)   Bacteroides cellulosilyticus WH2 ALJ62053.1     34
 ABI39_05920   Bacteroides dorei CL03T12C01 AND19027.1     34
 ABI39_00995   Bacteroides dorei CL03T12C01 AND18203.1     34
 ABI39_02585   Bacteroides dorei CL03T12C01 AND18457.1     34
 EL88_17030   Bacteroides dorei isolate HS1_L1_B_010 AII64751.1     34
 EL88_21850   Bacteroides dorei isolate HS1_L1_B_010 AII65628.1     34
 EL88_16540   Bacteroides dorei isolate HS1_L1_B_010 AII64663.1     34
 EL88_24860   Bacteroides dorei isolate HS1_L1_B_010 AII66186.1     34
 GV66_01070   Bacteroides dorei isolate HS1_L3_B_079 AII66390.1     34
 GV66_02675   Bacteroides dorei isolate HS1_L3_B_079 AII66683.1     34
 GV66_06120   Bacteroides dorei isolate HS1_L3_B_079 AII67307.1     34
 IY41_01015   Bacteroides dorei isolate HS2_L_2_B_045b ALA72225.1     34
 IY41_02545   Bacteroides dorei isolate HS2_L_2_B_045b ALA72481.1     34
 IY41_06445   Bacteroides dorei isolate HS2_L_2_B_045b ALA73151.1     34
 BF638R_0359   Bacteroides fragilis 638R CBW20958.1 E1WMB5   34
 BF638R_1266   Bacteroides fragilis 638R CBW21812.1 E1WR44   34
 MB0529_00294 (Xynd_1)   Bacteroides fragilis BE1 CUA16959.1     34
 MB0529_01164 (Xynd_3)   Bacteroides fragilis BE1 CUA17816.1     34
 VU15_05395   Bacteroides fragilis BOB25 AKA51195.1     34
 VU15_01085   Bacteroides fragilis BOB25 AKA50443.1     34
 BF0302   Bacteroides fragilis NCTC 9343 CAH06075.1 Q5LIF1   34
 BF1198   Bacteroides fragilis NCTC 9343 CAH06920.1 Q5LG21   34
 AE940_18610   Bacteroides fragilis S14 ANQ62626.1     34
 AE940_02895   Bacteroides fragilis S14 ANQ59847.1     34
 BF1249   Bacteroides fragilis YCH46 BAD47999.1 Q64WX7   34
 BF0354   Bacteroides fragilis YCH46 BAD47103.1 Q64ZH3   34
 Bovatus_03078 (Xynd_5)   Bacteroides ovatus ATCC 8483 ALJ47686.1     34
 Bovatus_03644 (Xsa_3)   Bacteroides ovatus ATCC 8483 ALJ48250.1     34
 Bovatus_04110 (Xynd_8)   Bacteroides ovatus ATCC 8483 ALJ48705.1     34
 Bovatus_04401   Bacteroides ovatus ATCC 8483 ALJ48994.1     34
 BACOV975_01900   Bacteroides ovatus V975 SCV08123.1     34
 BACOV975_01426   Bacteroides ovatus V975 SCV07659.1     34
 BACOV975_02201   Bacteroides ovatus V975 SCV08413.1     34
 BACOV975_00840   Bacteroides ovatus V975 SCV07084.1     34
 Bacsa_0124   Bacteroides salanitronis DSM 18170 ADY34736.1     34
 Btheta7330_04620 (Xynd_3)   Bacteroides thetaiotaomicron 7330 ALJ44136.1     34
 Btheta7330_04625 (Xynd_4)   Bacteroides thetaiotaomicron 7330 ALJ44141.1     34
 Btheta7330_04782 (Arba_3)   Bacteroides thetaiotaomicron 7330 ALJ44297.1     34
 α-L-arabinofuranosidase (BT3675;BT_3675) 3.2.1.55 Bacteroides thetaiotaomicron VPI-5482 AAO78780.1
NP_812586.1
Q8A1I6 3QZ4[A,B] 34
 BT3516   Bacteroides thetaiotaomicron VPI-5482 AAO78622.1
NP_812428.1
Q8A1Z2   34
 (grape RGII active) α-L-arabinofuranosidase (BT3662;BT_3662) 3.2.1.55 Bacteroides thetaiotaomicron VPI-5482 AAO78767.1
NP_812573.1
Q8A1J9 5MSX[A,B,C] 34
 BVU_0180   Bacteroides vulgatus ATCC 8482 ABR37908.1 A6KWU4   34
 BVU_0497   Bacteroides vulgatus ATCC 8482 ABR38207.1 A6KXP3   34
 BVU_1123   Bacteroides vulgatus ATCC 8482 ABR38814.1 A6KZF0   34
 BvMPK_3883 (fragment)   Bacteroides vulgatus mpk ALK86441.1     34
 BvMPK_0839   Bacteroides vulgatus mpk ALK83457.1     34
 BvMPK_4240   Bacteroides vulgatus mpk ALK86782.1     34
 BXY_18970   Bacteroides xylanisolvens XB1A CBK66995.1 D6CXU3   34
 BXY_28090   Bacteroides xylanisolvens XB1A CBK67836.1 D6D084   34
 BXY_32190 (partial)   Bacteroides xylanisolvens XB1A CBK68226.1 D6D1C4   34
 BARVI_10635   Barnesiella viscericola DSM 18177 AHF13127.1     34
 AB656_06485   Bifidobacterium actinocoloniiforme DSM 22766 AKV55851.1     34
 BAST_0219   Bifidobacterium asteroides PRL2011 AFU70816.1     34
 BBBF_0372 (fragment)   Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 BAQ97579.1     34
 BBBF_0371 (fragment)   Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 BAQ97578.1     34
 BBB_0358 (XynD)   Bifidobacterium bifidum BGN4 AFL03954.1     34
 BBJK_02021 (fragment)   Bifidobacterium bifidum LMG 13195 JCM 7004 BBA48381.1     34
 BBJK_02023 (fragment)   Bifidobacterium bifidum LMG 13195 JCM 7004 BBA48382.1     34
 BBPR_0379   Bifidobacterium bifidum PRL2010 ADP35495.1 E4NZS3   34
 BBIF_0386   Bifidobacterium bifidum S17 ADO52591.1 E3EPQ4   34
 HMPREF9228_1904   Bifidobacterium breve ACS-071-V-Sch8b AEF27730.1     34
 RY69_2162   Bifidobacterium breve BR3 ALE14370.1     34
 B7017_2026   Bifidobacterium breve JCM 7017 AHJ18243.1     34
 BBL520_10210   Bifidobacterium breve LMC520 AQM43865.1     34
 BCOR_0179   Bifidobacterium coryneforme LMG18911 AII74199.1     34
 BDP_0131   Bifidobacterium dentium Bd1 ADB08815.1 D2Q769   34
 BBDE_0121   Bifidobacterium dentium JCM 1195 = DSM 20436 BAQ26115.1     34
 BINDI_0115   Bifidobacterium indicum LMG 11587 = DSM 20214 AIC91401.1     34
 BL105A_1857   Bifidobacterium longum 105-A BAP84462.1     34
 B624_1717   Bifidobacterium longum 35624 AOL11159.1     34
 BBG7_1969   Bifidobacterium longum BG7 ALE37155.1     34
 GS08_10000   Bifidobacterium longum BXY01 AIF91402.1     34
 Blon_2411   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 ACJ53465.1 B7GNV9   34
 BLIJ_2482   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 BAJ70059.1     34
 BL1206_1986   Bifidobacterium longum subsp. longum AH1206 AOP02018.1     34
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