Glycoside Hydrolase Family 43 / Subf 29

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (439); Uniprot accession (70); PDB accession (4); 3D entries (2); cryst (0)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 CLSAP_19330 (Xynd_2)   Clostridium saccharoperbutylacetonicum N1-504 AQR94620.1     29
 Clo1100_0915   Clostridium sp. BNL1100 AEY65172.1     29
 Clo1100_0911   Clostridium sp. BNL1100 AEY65168.1     29
 A9D14_17025   Croceicoccus marinus E4A9 ARU18010.1     29
 A9D14_05605   Croceicoccus marinus E4A9 ARU17280.1     29
 FH5T_02105   Draconibacterium orientale FH5 AHW58776.1     29
 FH5T_02355   Draconibacterium orientale FH5 AHW58817.1     29
 Dfer_0823   Dyadobacter fermentans DSM 18053 ACT92083.1 C6W2B0   29
 DN752_23715   Echinicola strongylocentroti MEBiC08714 AWW32898.1     29
 DN752_08845   Echinicola strongylocentroti MEBiC08714 AWW33109.1     29
 Echvi_0496   Echinicola vietnamensis DSM 17526 AGA76780.1     29
 Echvi_0500   Echinicola vietnamensis DSM 17526 AGA76784.1     29
 Echvi_2668   Echinicola vietnamensis DSM 17526 AGA78908.1     29
 Echvi_2672   Echinicola vietnamensis DSM 17526 AGA78912.1     29
 Fisuc_1775 / FSU_2274   Fibrobacter succinogenes subsp. succinogenes S85 ACX75368.1
ADL25995.1
C9RS32   29
 Fisuc_1997 / FSU_2520   Fibrobacter succinogenes subsp. succinogenes S85 ACX75585.1
ADL24935.1
C9RIW4   29
 Fisuc_1998 / FSU_2521   Fibrobacter succinogenes subsp. succinogenes S85 ACX75586.1
ADL25633.1
C9RIW5   29
 Fisuc_2621 / FSU_3190   Fibrobacter succinogenes subsp. succinogenes S85 ACX76205.1
ADL24798.1
C9RMH3   29
 Fisuc_2929 / FSU_0192   Fibrobacter succinogenes subsp. succinogenes S85 ACX76509.1
ADL25236.1
C9RP41   29
 FLA_2779   Filimonas lacunae NBRC 104114 BAV06759.1     29
 FLA_2822   Filimonas lacunae NBRC 104114 BAV06802.1     29
 OP10G_0287   Fimbriimonas ginsengisoli Gsoil 348 AIE83655.1     29
 D770_14215   Flammeovirgaceae bacterium 311 AHM61097.1     29
 BIW12_10375   Flavobacterium commune PK15 APA00964.1     29
 BIW12_00225   Flavobacterium commune PK15 AOZ97988.1     29
 BIW12_10330   Flavobacterium commune PK15 AOZ99800.1     29
 BIW12_10385   Flavobacterium commune PK15 AOZ99807.1     29
 BIW12_08930   Flavobacterium commune PK15 APA00935.1     29
 BB050_03121 (Xynd_1)   Flavobacterium johnsoniae GSE09 AOC96211.1     29
 BB050_03126 (Xsa_3)   Flavobacterium johnsoniae GSE09 AOC96216.1     29
 J421_5260   Gemmatirosa kalamazoonesis KBS708 AHG92795.1     29
 GRFL_2261   Gramella flava JLT2011 APU68985.1     29
 orf683   Gramella forsetii KT0803 CAL65670.1 A0LZ75   29
 C7S20_13675   Gramella sp. SH35 AVR46224.1     29
 AciX8_4777   Granulicella mallensis MP5ACTX8 AEU39046.1     29
 YC6258_04105   Gynuella sunshinyii YC6258 AJQ96141.1     29
 AUC43_05540   Hymenobacter sedentarius DG5B ALW87244.1     29
 AUC43_05540   Hymenobacter sedentarius DG5B ALW87244.1     29
 PK28_16740   Hymenobacter sp. DG25B AIZ65337.1     29
 PK28_16815   Hymenobacter sp. DG25B AIZ65444.1     29
 Hsw_PA0154   Hymenobacter swuensis DY53 AHJ95487.1     29
 Hsw_2672   Hymenobacter swuensis DY53 AHJ98267.1     29
 K734_00410   Idiomarina loihiensis GSL 199 AGM34949.1     29
 IL0082   Idiomarina loihiensis L2TR AAV80925.1 Q5QZY8   29
 YQ44_25820   Janthinobacterium sp. 1_2014MBL_MicDiv APA71703.1     29
 BN2497_4399   Janthinobacterium sp. CG23_2 CUI20424.1     29
 BZG29_02295   Janthinobacterium sp. LM6 AQR71713.1     29
 CNX70_02330   Janthinobacterium svalbardensis PAMC 27463 ATD63594.1     29
 SAMN04488563_0926   Jiangella alkaliphila DSM 45079 SDU28740.1     29
 SAMN04515669_6135   Jiangella sp. DSM 45060 SDT70105.1     29
 AT746_16795   Lacimicrobium alkaliphilum YelD216 ALS99760.1     29
 C9I28_18865   Massilia armeniaca ZMN-3 AVR97474.1     29
 AM586_16690   Massilia sp. WG5 ALK97608.1     29
 CR152_16170   Massilia violaceinigra B2 ATQ75894.1     29
 Micau_1958   Micromonospora aurantiaca ATCC 27029 ADL45506.1 D9T229   29
 Micau_2688   Micromonospora aurantiaca ATCC 27029 ADL46224.1 D9T902   29
 GA0070611_2342   Micromonospora auratinigra DSM 44815 SBT43499.1     29
 GA0070612_4439   Micromonospora chokoriensis DSM 45160 SCF17246.1     29
 GA0070607_6313   Micromonospora coriariae DSM 44875 SCF16265.1     29
 GA0070614_5877 (fragment)   Micromonospora coxensis DSM 45161 SCG76238.1     29
 GA0070610_1947   Micromonospora echinofusca DSM 43913 SCG15704.1     29
 GA0070618_4615   Micromonospora echinospora DSM 43816 SCF26433.1     29
 GA0070618_5964   Micromonospora echinospora DSM 43816 SCF37815.1     29
 GA0070621_2674   Micromonospora narathiwatensis DSM 45248 SBT46650.1     29
 GA0070623_1240   Micromonospora rifamycinica DSM 44983 SCG45346.1     29
 ML5_5707   Micromonospora sp. L5 ADU11164.1 D3C5M9   29
 ML5_2064   Micromonospora sp. L5 ADU07590.1 D3C730   29
 CO540_09875   Micromonospora sp. WMMA2032 ATO14100.1     29
 GA0070619_2461   Micromonospora zamorensis DSM 45600 SCG50460.1     29
 SAMN05216490_0699   Mucilaginibacter mallensis MP1X4 SDS18839.1     29
 C0V82_24545   Niveispirillum cyanobacteriorum TH16 AUN33517.1     29
 BN4615_P7388   Nonomuraea gerenzanensis ATCC 39727 SBO97872.1     29
 BN4615_P3179   Nonomuraea gerenzanensis ATCC 39727 SBO93665.1     29
 BKM31_10545   Nonomuraea sp. ATCC 55076 AQZ70288.1     29
 BKM31_32295   Nonomuraea sp. ATCC 55076 AQZ65517.1     29
 PM3016_2610   Paenibacillus mucilaginosus 3016 AFC29492.1     29
 PM3016_5823   Paenibacillus mucilaginosus 3016 AFC32499.1     29
 B2K_13240   Paenibacillus mucilaginosus K02 AFH61670.1
AFK65334.1
    29
 B2K_29640   Paenibacillus mucilaginosus K02 AFH64816.1     29
 KNP414_02342   Paenibacillus mucilaginosus KNP414 AEI40903.1     29
 KNP414_06206   Paenibacillus mucilaginosus KNP414 AEI44729.1     29
 Palpr_1628   Paludibacter propionicigenes WB4 ADQ79769.1 E4T4X5   29
 Palpr_1631   Paludibacter propionicigenes WB4 ADQ79772.1 E4T4X8   29
 Palpr_1629   Paludibacter propionicigenes WB4 ADQ79770.1 E4T4X6   29
 BFS30_21045   Pedobacter steynii DX4 AOM80926.1     29
 L21SP3_00074 (Xynd_1)   Phycisphaerae bacterium L21-RPul-D3 AQQ08298.1     29
 STSP1_02342 (Xsa_3)   Phycisphaerae bacterium ST-PulAB-D4 ARN57916.1     29
 VT03_30370 (XynD)   Planctomyces sp. SH-PL14 AMV22249.1     29
 C6W10_01485   Plantactinospora sp. BB1 AVT41091.1     29
 C6W10_16920   Plantactinospora sp. BB1 AVT41542.1     29
 C6361_21960   Plantactinospora sp. BC1 AVT34680.1     29
 C6361_04955   Plantactinospora sp. BC1 AVT34178.1     29
 C6361_00160   Plantactinospora sp. BC1 AVT28173.1     29
 ORF0316   Prevotella bryantii B14 ADI70670.1 D7SFG6   29
 ORF1114   Prevotella bryantii B14 ADI70671.1 D7SFG7   29
 PRU_2744   Prevotella ruminicola 23 ADE81813.1 D5EY28   29
 PRU_2744   Prevotella ruminicola 23 ADE81813.1 D5EY28   29
 Pedsa_2569   Pseudopedobacter saltans DSM 12145 ADY53113.1     29
 Pedsa_2570   Pseudopedobacter saltans DSM 12145 ADY53114.1     29
 Pedsa_2574   Pseudopedobacter saltans DSM 12145 ADY53118.1     29
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