Glycoside Hydrolase Family 43 / Subf 1

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (696); Uniprot accession (54); PDB accession (9); 3D entries (2); cryst (0)
| 1 | 2 | 3 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Niako_2827   Niastella koreensis GR20-10 AEV99161.1     1
 Y958_19230   Nitrospirillum amazonense CBAmc ASG23009.1     1
 BES08_20305   Novosphingobium resinovorum SA1 AOR79215.1     1
 PP1Y_Mpl1190   Novosphingobium sp. PP1Y CCA90098.1     1
 Oter_0375   Opitutus terrae PB90-1 ACB73665.1 B1ZQZ8   1
 PBOR_25965   Paenibacillus borealis DSM 13188 AIQ60010.1     1
 multifunctional exo-β-xylosidase / endo-xylanase / α-L-arabinofuranosidase (GH43B6)   Paenibacillus curdlanolyticus B-6 AIU98619.1     1
 B9T62_22320   Paenibacillus donghaensis KCTC 13049 ASA23299.1     1
 A3958_01965   Paenibacillus glucanolyticus 5162 ANA78836.1     1
 PGRAT_23085   Paenibacillus graminis DSM 15220 AIQ70212.1     1
 BBD41_21585   Paenibacillus ihbetae IHBB 9852 ANY74945.1     1
 PM3016_3553   Paenibacillus mucilaginosus 3016 AFC30378.1     1
 B2K_18320   Paenibacillus mucilaginosus K02 AFH62652.1     1
 KNP414_03331 (XsA)   Paenibacillus mucilaginosus KNP414 AEI41889.1     1
 PODO_15040   Paenibacillus odorifer DSM 15391 AIQ74464.1     1
 PRIO_5012 (Xsa5)   Paenibacillus riograndensis SBR5 CQR57414.1     1
 BBD42_20890   Paenibacillus sp. BIHB4019 ANY68653.1     1
 H70357_13630   Paenibacillus sp. FSL H7-0357 AIQ17583.1     1
 H70737_14565   Paenibacillus sp. FSL H7-0737 AIQ23983.1     1
 H70737_27020   Paenibacillus sp. FSL H7-0737 AIQ26165.1     1
 P40081_26105   Paenibacillus sp. FSL P4-0081 AIQ31249.1     1
 R50345_15170   Paenibacillus sp. FSL R5-0345 AIQ35846.1     1
 R50345_27205   Paenibacillus sp. FSL R5-0345 AIQ37976.1     1
 R50912_24050   Paenibacillus sp. FSL R5-0912 AIQ42773.1     1
 R70723_07215   Paenibacillus sp. FSL R7-0273 AIQ45700.1     1
 R70331_06850   Paenibacillus sp. FSL R7-0331 AIQ51255.1     1
 Pjdr2_1907   Paenibacillus sp. JDR-2 ACT00564.1 C6CTD3   1
 LPB68_05855   Paenibacillus sp. LPB0068 AOZ91792.1     1
 CIC07_22385   Paenibacillus sp. RUD330 ASS68576.1     1
 GYMC10_4761   Paenibacillus sp. Y412MC10 ACX66979.1 D3EBD3   1
 HPL003_16725   Paenibacillus terrae HPL-003 AET60091.1     1
 BS614_20270   Paenibacillus xylanexedens PAMC 22703 APO46132.1     1
 AWM70_07350   Paenibacillus yonginensis DCY84 ANS74416.1     1
 Palpr_0441   Paludibacter propionicigenes WB4 ADQ78601.1 E4T1K7   1
 AY601_2998   Pedobacter cryoconitis PAMC 27485 AMP99872.1     1
 BW723_10270   Polaribacter reichenbachii 6Alg 8T APZ46651.1     1
 BTO07_11155   Polaribacter sp. SA4-12 ARV15659.1     1
 LPB03_09710   Polaribacter vadi LPB0003 AOW17717.1     1
 CA264_13930   Pontibacter actiniarum DSM 19842 ARS36446.1     1
 PKOR_02835   Pontibacter korlensis X14-1T AKD02264.1     1
 β-xylosidase (XynB;Orf0389;00389-GPBOY;PBR_0394) 3.2.1.37 Prevotella bryantii B14 CAA89208.1
CAD21010.1
P48791
Q7AUW6
  1
 Prede_1761   Prevotella dentalis DSM 3688 AGB29058.1     1
 PRU_2597   Prevotella ruminicola 23 ADE81401.1 D5EXA3   1
 Patl_3728   Pseudoalteromonas atlantica T6c ABG42230.1 Q15PF8   1
 PESP_a2214   Pseudoalteromonas espejiana ATCC 29659 ASM50214.1     1
 D172_007435   Pseudoalteromonas sp. Bsw20308 ALQ09733.1     1
 Pedsa_2706   Pseudopedobacter saltans DSM 12145 ADY53248.1     1
 Psesu_2906   Pseudoxanthomonas suwonensis 11-1 ADV28730.1     1
 WQ53_05860   Pseudoxanthomonas suwonensis J1 AKC86367.1     1
 TH63_09685   Rufibacter sp. DG31D AKQ45853.1     1
 DC20_21125   Rufibacter tibetensis 1351 ALJ01618.1     1
 Runsl_5723   Runella slithyformis DSM 19594 AEI52008.1     1
 Sde_0822 (Arb43K)   Saccharophagus degradans 2-40 ABD80084.1 Q21MJ5   1
 AO058_07140   Salegentibacter sp. T436 APS38673.1     1
 SJ2017_2013   Shewanella japonica KCTC 22435 ARD22311.1     1
 SCE1572_12675   Sorangium cellulosum So0157-2 AGP35295.1     1
 Sph21_2658   Sphingobacterium sp. 21 ADZ79207.1     1
 BV902_20605   Sphingobacterium sp. B29 APU98442.1     1
 β-xylosidase (Xyl455) 3.2.1.37 Sphingobacterium sp. HP455 AGL51118.1     1
 BN1088_1430377 (XsA)   Sphingobacterium sp. PM2-P1-29 CDS91973.1     1
 GH43B19   Sphingobacterium sp. TN19 ACX30651.1 D8L2Y1   1
 SJA_C2-02270 (XynB)   Sphingobium japonicum UT26S UT26S (= NBRC 101211) BAI98590.1 D4Z7X1   1
 BSY17_3553   Sphingobium sp. RAC03 AOF94548.1     1
 TZ53_09655   Sphingobium sp. YBL2 AJR23949.1     1
 BJP26_13010   Sphingomonas melonis TY AOW24379.1     1
 AWL63_14535   Sphingomonas panacis DCY99 AOH86816.1     1
 NX02_07150   Sphingomonas sanxanigenens DSM 19645 = NX02 AHE53157.1     1
 AV944_11900   Sphingomonas sp. LK11 APX66418.1     1
 A7E77_04025   Sphingomonas sp. NIC1 ANC86126.1     1
 MC45_12720   Sphingomonas taxi ATCC 55669 AIT07092.1     1
 Slin_0353   Spirosoma linguale DSM 74 ADB36417.1 D2QE62   1
 SD10_17830   Spirosoma radiotolerans DG5A AKD56490.1     1
 SMD_2230   Stenotrophomonas maltophilia D457 CCH12771.1     1
 DX03_09870   Stenotrophomonas rhizophila DSM 14405 AHY58975.1     1
 BAY15_2018   Stenotrophomonas rhizophila QL-P4 AOA72452.1     1
 AXG53_00460   Stenotrophomonas sp. KCTC 12332 YM1 AMJ55271.1     1
 TERTU_1419   Teredinibacter turnerae T7901 ACR14623.1 C5BSM4   1
 TERTU_4678   Teredinibacter turnerae T7901 ACR12914.1 C5BKG2   1
 Terro_0907   Terriglobus roseus DSM 18391 AFL87233.1     1
 Theco_0805   Thermobacillus composti KWC4 AGA57004.1     1
 β-xylosidase / α-L-arabinofuranosidase (CoXyl43) 3.2.1.37
3.2.1.55
uncultured bacterium BAS02080.1   5GLK[A,B]
5GLL[A,B]
5GLM[A,B]
5GLN[A,B]
5GLO[A,B]
5GLP[A,B]
5GLQ[A,B]
5GLR[A,B]
1
 β-xylosidase/α-L-arabinofuranosidase, glycoside hydrolase family GH43   uncultured bacterium AOE06278.1     1
 ORF   uncultured bacterium ANJ46994.1     1
 XYL3H9-ORF36 (Bxy1)   uncultured bacterium AEV59728.1     1
 MetaPbio_Contig5_100c--XOS   uncultured bacterium CCG34978.1     1
 MetaPbio_Contig7_50--XOS / MetaPbio_Contig8_90--XOS   uncultured bacterium CCG34740.1
CCG34762.1
    1
 ORF   uncultured bacterium Contig1468_n_1482_cl AHF26419.1     1
 ORF (fragment)   uncultured bacterium Contig15 AHF23850.1     1
 ORF   uncultured bacterium Contig27 AHF24625.1     1
 ORF   uncultured bacterium Contig52 AHF25088.1     1
 β-xylosidase (r_03-04) (probable fragment)   uncultured bacterium r_03 AFN57688.1     1
 β-1,4-xylosidase / α-L-arabinofuranoside (RuXyn1) 3.2.1.37
3.2.1.55
uncultured rumen bacterium ADO20354.1 E3TBJ3   1
 β-xylosidase / α-L-arabinofuranosidase (RUM630-BX) 3.2.1.37 uncultured rumen bacterium AFE48532.1     1
 IMCC26134_12455   Verrucomicrobia bacterium IMCC26134 AKC83386.1     1
 A6E01_11245   Vibrio breoganii FF50 ANO33760.1     1
 XALc_0040   Xanthomonas albilineans GPE PC73 CBA14586.1     1
 AKJ12_20370   Xanthomonas arboricola pv. juglandis Xaj 417 AKU51875.1     1
 XAC4258 (Xsa)   Xanthomonas axonopodis pv. citri str. 306 AAM39093.1
NP_644557.1
Q8PET2   1
 XACM_4131   Xanthomonas axonopodis pv. citrumelo F1 AEO44367.1     1
 XAC29_21485   Xanthomonas axonopodis Xac29-1 AGH79680.1     1
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