Glycoside Hydrolase Family 43 / Subf 16

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (341); Uniprot accession (48); PDB accession (7); 3D entries (2); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 CIY_23730   Butyrivibrio fibrisolvens 16/4 CBK75020.1 D4IW77   16
 bhn_I0167   Butyrivibrio hungatei MB2003 AOZ95203.1     16
 bpr_I0737   Butyrivibrio proteoclasticus B316 ADL33480.1 E0S105   16
 bpr_I0302   Butyrivibrio proteoclasticus B316 ADL33050.1 E0RYG9   16
 Athe_0182   Caldicellulosiruptor bescii DSM 6725 ACM59334.1 B9MMA2   16
 Calkro_2388   Caldicellulosiruptor kronotskyensis 2002 ADQ47209.1 E4SHI4   16
 Calow_0121   Caldicellulosiruptor owensensis OL ADQ03729.1 E4Q2A1   16
 β-xylosidase / α-L-arabinofuranosidase (XynF) 3.2.1.37
3.2.1.55
Caldicellulosiruptor saccharolyticus AAB87371.1 O30426   16
 bifunctional α-L-arabinofuranosidase (XynF;Csac_2411) 3.2.1.55 Caldicellulosiruptor saccharolyticus DSM 8903 ABP67988.1 A4XM53   16
 xylanase C (XynC) (multidomain protein) 3.2.1.8 Caldicellulosiruptor sp. Rt69B.1 AAB95326.1 O52374   16
 bifunctional β-1,4-xylanase / α-L-arabinosidase (XynA) 3.2.1.55
3.2.1.8
Caldicellulosiruptor sp. Tok7B.1 AAD30363.1 Q9X3P5   16
 β-xylosidase (CGSCsYakCAS_10615) (fragment) (Xyn43A) 3.2.1.- Cellulosilyticum ruminicola CGMCC 1.5065 ACZ98594.1 D2KFJ2   16
 CBR64_12860   Cellulosimicrobium cellulans PSBB019 ARU52217.1     16
 B8281_18290   Cellulosimicrobium sp. TH-20 ARK06382.1     16
 CBR65_14050   Cellvibrio sp. PSBB006 ARU28469.1     16
 CAP0120   Clostridium acetobutylicum ATCC 824 AAK76865.1
NP_149283.1
Q97TI1   16
 SMB_P118   Clostridium acetobutylicum DSM 1731 AEI34861.1     16
 CEA_P0119   Clostridium acetobutylicum EA 2018 ADZ22902.1     16
 CIBE_5480 (XynD)   Clostridium beijerinckii CUU50570.1     16
 CM240_2770   Clostridium bornimense M2/40 CDM69887.1     16
 Ccel_1229   [Clostridium] cellulolyticum H10 ACL75585.1 B8I0L0   16
 CCDG5_0803 (XynD)   [Clostridium] cellulosi CDZ23932.1     16
 Clocl_2437   [Clostridium] clariflavum DSM 19732 AEV69012.1     16
 A7L45_08640   Clostridium estertheticum subsp. estertheticum DSM 8809 APC40131.1     16
 Clole_3947   Clostridium lentocellum DSM 5427 ADZ85625.1     16
 CSACC_06870 (Xynd_2)   Clostridium saccharobutylicum BAS/B3/SW/136 AQR98885.1     16
 CSACC_06720 (Xynd_1)   Clostridium saccharobutylicum BAS/B3/SW/136 AQR98870.1     16
 CLSA_c06730 (Xynd1)   Clostridium saccharobutylicum DSM 13864 AGX41686.1     16
 CLSA_c06900 (Xynd2)   Clostridium saccharobutylicum DSM 13864 AGX41703.1     16
 CLOSACC_06720 (Xynd_1)   Clostridium saccharobutylicum NCP 195 AQS12858.1     16
 CLOSACC_06870 (Xynd_2)   Clostridium saccharobutylicum NCP 195 AQS12873.1     16
 CLOSC_06650 (Xynd_1)   Clostridium saccharobutylicum NCP 200 AQR88969.1     16
 CLOSC_06800 (Xynd_2)   Clostridium saccharobutylicum NCP 200 AQR88984.1     16
 CLOBY_07140 (Xynd_2)   Clostridium saccharobutylicum NCP 258 AQS08604.1     16
 CLOBY_06990 (Xynd_1)   Clostridium saccharobutylicum NCP 258 AQS08589.1     16
 Cspa_c14970 (Xynd1)   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF55267.1     16
 Cspa_c32780 (Xynd3)   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF57039.1     16
 CLSAP_14600 (Xynd_1)   Clostridium saccharoperbutylacetonicum N1-504 AQR94153.1     16
 Clo1100_2297   Clostridium sp. BNL1100 AEY66472.1     16
 CSTERLE_03225   [Clostridium] stercorarium subsp. leptospartum DSM 9219 ANX00670.1     16
 Cst_c07100   [Clostridium] stercorarium subsp. stercorarium DSM 8532 AGI38767.1
AGC67716.1
    16
 CSTERTH_03285   [Clostridium] stercorarium subsp. thermolacticum DSM 2910 ANW98131.1     16
 DICTH_1791   Dictyoglomus thermophilum H-6-12 ACI19652.1 B5YB77   16
 EUS_17870   [Eubacterium] siraeum 70/3 CBK96864.1 D4JUU5   16
 EUS_17880   [Eubacterium] siraeum 70/3 CBK96865.1 D4JUU6   16
 EUS_19530   [Eubacterium] siraeum 70/3 CBK97001.1 D4JV82   16
 ES1_23510   [Eubacterium] siraeum V10Sc8a CBL35179.1 D4MN46   16
 ES1_23520   [Eubacterium] siraeum V10Sc8a CBL35180.1 D4MN47   16
 Fisuc_1762 / FSU_2262   Fibrobacter succinogenes subsp. succinogenes S85 ACX75355.1
ADL25514.1
C9RS19   16
 Fisuc_1763 / FSU_2263   Fibrobacter succinogenes subsp. succinogenes S85 ACX75356.1
ADL25037.1
C9RS20   16
 Fisuc_1764 / FSU_2264   Fibrobacter succinogenes subsp. succinogenes S85 ACX75357.1
ADL26064.1
C9RS21   16
 YC6258_04181   Gynuella sunshinyii YC6258 AJQ96215.1     16
 YC6258_04182 (fragment)   Gynuella sunshinyii YC6258 AJQ96216.1     16
 Jden_1928   Jonesia denitrificans DSM 20603 ACV09570.1 C7R012   16
 CEP80_08670   Jonesia denitrificans FDAARGOS_301 ASE09203.1     16
 KSE_73870   Kitasatospora setae KM-6054 BAJ33142.1 E4NJJ4   16
 GA0070620_0162   Micromonospora krabiensis DSM 45344 SBV24725.1     16
 SAMN05216490_0707   Mucilaginibacter mallensis MP1X4 SDS19262.1     16
 SAMN05216490_3496   Mucilaginibacter mallensis MP1X4 SDT44232.1     16
 PBOR_13750   Paenibacillus borealis DSM 13188 AIQ57877.1     16
 LPB68_10800   Paenibacillus crassostreae LPB0068 AOZ94667.1     16
 LPB68_18770   Paenibacillus crassostreae LPB0068 AOZ94025.1     16
 GH43A   Paenibacillus curdlanolyticus B-6 AIY28330.1     16
 PGRAT_09335   Paenibacillus graminis DSM 15220 AIQ67809.1     16
 BBD41_26905   Paenibacillus ihbetae IHBB 9852 ANY75913.1     16
 B4V02_12320   Paenibacillus kribbensis AM49 ASR47408.1     16
 B4V02_13365   Paenibacillus kribbensis AM49 ASR47593.1     16
 PM3016_3781   Paenibacillus mucilaginosus 3016 AFC30594.1     16
 B2K_19655 (fragment)   Paenibacillus mucilaginosus K02 AFH62900.1     16
 KNP414_04357 (XynD)   Paenibacillus mucilaginosus KNP414 AEI42889.1     16
 ABE82_13190   Paenibacillus peoriae HS311 ALA42405.1     16
 VK72_13055   Paenibacillus polymyxa ATCC 15970 APQ59578.1     16
 α-L-arabinofuranosidase 43A (XynD) (formerly xylanase D) (Xyn43A) 3.2.1.55 Paenibacillus polymyxa ATCC 842 CAA40378.1 P45796   16
 LK13_00010   Paenibacillus polymyxa CF05 AIY07055.1     16
 X809_13790   Paenibacillus polymyxa CR1 AHC20180.1
AIW40133.1
    16
 PPE_02273   Paenibacillus polymyxa E681 ADM70106.1 E0RKL8   16
 endo-β-1,4-xylanase (Xyn43A) (Xyn43A)   Paenibacillus polymyxa GS01 AGM16427.1     16
 AOU00_24435   Paenibacillus polymyxa J AOK92702.1     16
 PPM_2373 (Xynd3)   Paenibacillus polymyxa M1 CCC85310.1     16
 RE92_24360   Paenibacillus polymyxa Sb3-1 AJE53965.1     16
 PPSC2_c2639   Paenibacillus polymyxa SC2 ADO56608.1 E3E468   16
 XynD   Paenibacillus polymyxa SC2 ABZ80847.1 B1A0K7   16
 PPSQR21_024510   Paenibacillus polymyxa SQR-21 SQR21 AHM66093.1     16
 PPYC1_12795   Paenibacillus polymyxa YC0136 APB71188.1     16
 PPYC2_13240   Paenibacillus polymyxa YC0573 APB75875.1     16
 PRIO_5021 (Xynd1)   Paenibacillus riograndensis SBR5 CQR57423.1     16
 PRIO_5036 (Xynd3)   Paenibacillus riograndensis SBR5 CQR57438.1     16
 BBD42_20860   Paenibacillus sp. BIHB4019 ANY68648.1     16
 BBD42_20885   Paenibacillus sp. BIHB4019 ANY68652.1     16
 H70357_13605   Paenibacillus sp. FSL H7-0357 AIQ17579.1     16
 P40081_13455   Paenibacillus sp. FSL P4-0081 AIQ29057.1     16
 P40081_13570   Paenibacillus sp. FSL P4-0081 AIQ29078.1     16
 R50912_12955   Paenibacillus sp. FSL R5-0912 AIQ40831.1     16
 R50912_13235   Paenibacillus sp. FSL R5-0912 AIQ40882.1     16
 R70723_17025   Paenibacillus sp. FSL R7-0273 AIQ47403.1     16
 Pjdr2_4267   Paenibacillus sp. JDR-2 ACT02891.1 C6D788   16
 GYMC10_3294   Paenibacillus sp. Y412MC10 ACX65540.1 D3EH16   16
 HPL003_21200   Paenibacillus terrae HPL-003 AET60974.1     16
 HPL003_16740   Paenibacillus terrae HPL-003 AET60094.1     16
 HPL003_21330 (fragment)   Paenibacillus terrae HPL-003 AET60996.1     16
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