Glycoside Hydrolase Family 43 / Subf 12

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (681); Uniprot accession (106); PDB accession (4); 3D entries (3); cryst (1)
All (667) Archaea (4) Bacteria (660) unclassified (3) Structure (3 - 1 cryst) Characterized (12)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 B2K_19060   Paenibacillus mucilaginosus K02 AFH62789.1     12
 B2K_29235   Paenibacillus mucilaginosus K02 AFH64735.1     12
 KNP414_04221   Paenibacillus mucilaginosus KNP414 AEI42753.1     12
 KNP414_04414   Paenibacillus mucilaginosus KNP414 AEI42946.1     12
 KNP414_06115   Paenibacillus mucilaginosus KNP414 AEI44639.1     12
 PODO_26135   Paenibacillus odorifer DSM 15391 AIQ76438.1     12
 PODO_15400   Paenibacillus odorifer DSM 15391 AIQ74530.1     12
 PODO_09220   Paenibacillus odorifer DSM 15391 AIQ73416.1     12
 ABE82_24525   Paenibacillus peoriae HS311 ALA44460.1     12
 PPE_01656   Paenibacillus polymyxa E681 ADM69493.1 E0RDU0   12
 PPM_4828 (Xylb3) (fragment)   Paenibacillus polymyxa M1 CCI71635.1     12
 RE92_12965   Paenibacillus polymyxa Sb3-1 AJE51886.1     12
 PPSC2_c5188 (fragment)   Paenibacillus polymyxa SC2 ADO59126.1 E3EC02   12
 PPYC1_15575   Paenibacillus polymyxa YC0136 APB71700.1     12
 PPYC2_01380   Paenibacillus polymyxa YC0573 APB73749.1     12
 PRIO_3594   Paenibacillus riograndensis SBR5 CQR55997.1     12
 PRIO_2309 (Xylb1)   Paenibacillus riograndensis SBR5 CQR54718.1     12
 PRIO_5002 (Xylb3)   Paenibacillus riograndensis SBR5 CQR57404.1     12
 BBD42_16565   Paenibacillus sp. BIHB4019 ANY67903.1     12
 H70357_18455   Paenibacillus sp. FSL H7-0357 AIQ18458.1     12
 H70357_29915   Paenibacillus sp. FSL H7-0357 AIQ20452.1     12
 H70737_14405   Paenibacillus sp. FSL H7-0737 AIQ23955.1     12
 P40081_08695   Paenibacillus sp. FSL P4-0081 AIQ28242.1     12
 P40081_26110   Paenibacillus sp. FSL P4-0081 AIQ31250.1     12
 P40081_10610   Paenibacillus sp. FSL P4-0081 AIQ28577.1     12
 P40081_08845   Paenibacillus sp. FSL P4-0081 AIQ28270.1     12
 R50345_15005   Paenibacillus sp. FSL R5-0345 AIQ35819.1     12
 R50345_26070   Paenibacillus sp. FSL R5-0345 AIQ37779.1     12
 R50912_24055   Paenibacillus sp. FSL R5-0912 AIQ42774.1     12
 R50912_08025   Paenibacillus sp. FSL R5-0912 AIQ39982.1     12
 R50912_10160   Paenibacillus sp. FSL R5-0912 AIQ40342.1     12
 R50912_07880   Paenibacillus sp. FSL R5-0912 AIQ39954.1     12
 R70723_12090   Paenibacillus sp. FSL R7-0273 AIQ46526.1     12
 R70723_09690   Paenibacillus sp. FSL R7-0273 AIQ46127.1     12
 R70723_07220   Paenibacillus sp. FSL R7-0273 AIQ45701.1     12
 R70723_28065   Paenibacillus sp. FSL R7-0273 AIQ49320.1     12
 R70723_08140   Paenibacillus sp. FSL R7-0273 AIQ45850.1     12
 R70331_09555   Paenibacillus sp. FSL R7-0331 AIQ51737.1     12
 R70331_06855   Paenibacillus sp. FSL R7-0331 AIQ51256.1     12
 R70331_08180   Paenibacillus sp. FSL R7-0331 AIQ51488.1     12
 R70331_27120   Paenibacillus sp. FSL R7-0331 AIQ54810.1     12
 R70331_07475   Paenibacillus sp. FSL R7-0331 AIQ51367.1     12
 R70331_11700   Paenibacillus sp. FSL R7-0331 AIQ52108.1     12
 Pjdr2_3670   Paenibacillus sp. JDR-2 ACT02301.1 C6D473   12
 Pjdr2_1325 (XynB)   Paenibacillus sp. JDR-2 ABV90487.1
ACT00001.1
A9QDS1   12
 GYMC10_3907   Paenibacillus sp. Y412MC10 ACX66138.1 D3EMB6   12
 GYMC10_4842   Paenibacillus sp. Y412MC10 ACX67059.1 D3ECD5   12
 HPL003_16715   Paenibacillus terrae HPL-003 AET60089.1     12
 BS614_26460   Paenibacillus xylanexedens PAMC 22703 APO47242.1     12
 BS614_09850   Paenibacillus xylanexedens PAMC 22703 APO44278.1     12
 BS614_07895   Paenibacillus xylanexedens PAMC 22703 APO43940.1     12
 AWM70_07710   Paenibacillus yonginensis DCY84 ANS74484.1     12
 Palpr_1658   Paludibacter propionicigenes WB4 ADQ79799.1 E4T505   12
 A4V02_13295   Parabacteroides sp. YL27 ANU64597.1     12
 AY601_2993   Pedobacter cryoconitis PAMC 27485 AMP99867.1     12
 ING2E5A_1212   Petrimonas mucosa DSM 28695 SCM57162.1     12
 PHZ_c2480 (XylB)   Phenylobacterium zucineum HLK1 ACG78889.1 B4RGI3   12
 BWO91_09205   Plantibacter flavus 251 AQX80134.1     12
 BW723_10290   Polaribacter reichenbachii 6Alg 8T APZ46655.1     12
 BW723_03870   Polaribacter reichenbachii 6Alg 8T APZ45487.1     12
 BTO07_11200   Polaribacter sp. SA4-12 ARV15667.1     12
 BTO07_15760   Polaribacter sp. SA4-12 ARV16502.1     12
 LPB03_09705   Polaribacter vadi LPB0003 AOW17716.1     12
 CA264_13935   Pontibacter actiniarum DSM 19842 ARS36447.1     12
 PKOR_02840   Pontibacter korlensis X14-1T AKD05467.1     12
 arabinoxylan arabinofuranohydrolase (ORF2351) (Ara43A) 3.2.1.55 Prevotella bryantii B14 ADI70680.1 D7SFH6   12
 Prede_1758   Prevotella dentalis DSM 3688 AGB29055.1     12
 PSM36_3304   Proteiniphilum saccharofermentans SCD22089.1     12
 PSM36_3304   Proteiniphilum saccharofermentans SCD22089.1     12
 Achl_0430   Pseudarthrobacter chlorophenolicus A6 ACL38429.1 B8HAG8   12
 SAMN04489743_0689   Pseudarthrobacter equi IMMIB L-1606 SDS71896.1     12
 Patl_0842   Pseudoalteromonas atlantica T6c ABG39370.1 Q15XL8   12
 Pedsa_2580   Pseudopedobacter saltans DSM 12145 ADY53124.1     12
 Pedsa_2709   Pseudopedobacter saltans DSM 12145 ADY53251.1     12
 Psesu_2924   Pseudoxanthomonas suwonensis 11-1 ADV28748.1     12
 WQ53_05955   Pseudoxanthomonas suwonensis J1 AKC86381.1     12
 RHOM_05750   Roseburia hominis A2-183 AEN96269.1     12
 ROI_22640   Roseburia intestinalis M50/1 CBL09263.1 D4KQW1   12
 ROI_23910   Roseburia intestinalis M50/1 CBL09363.1 D4KR61   12
 ROI_37890   Roseburia intestinalis M50/1 CBL10563.1 D4KJN3   12
 RO1_13630   Roseburia intestinalis XB6B4 CBL11992.1 D4KXA2   12
 RO1_14860   Roseburia intestinalis XB6B4 CBL12098.1 D4KXK8   12
 RO1_26390   Roseburia intestinalis XB6B4 CBL13089.1 D4L0E9   12
 TH63_14725   Rufibacter sp. DG31D AKQ46600.1     12
 TH63_05320   Rufibacter sp. DG31D AKQ45183.1     12
 DC20_00465   Rufibacter tibetensis strain 1351 ALJ01084.1     12
 A4V00_07760   Ruminiclostridium sp. KB18 ANU53929.1     12
 RBI_I00435   Ruminococcus bicirculans 80/3 CCO04163.1     12
 Runsl_5735   Runella slithyformis DSM 19594 AEI52020.1     12
 Sde_0598 (Arb43H)   Saccharophagus degradans 2-40 ABD79862.1 Q21N67   12
 Sde_1655 (Arb43I)   Saccharophagus degradans 2-40 ABD80915.1 Q21K64   12
 AO058_06975   Salegentibacter sp. T436 APS38645.1     12
 AO058_07135   Salegentibacter sp. T436 APS38672.1     12
 Sked_21180   Sanguibacter keddieii DSM 10542 ACZ22038.1 D1BHW8   12
 Sked_20520   Sanguibacter keddieii DSM 10542 ACZ21974.1 D1BHQ4   12
 SCIP_1188   Scardovia inopinata JCM 12537 BAR07255.1     12
 SpiGrapes_1804   Sphaerochaeta pleomorpha str. Grapes AEV29600.1     12
 Sph21_2647   Sphingobacterium sp. 21 ADZ79196.1     12
 Sph21_2653   Sphingobacterium sp. 21 ADZ79202.1     12
 BN1088_1430379   Sphingobacterium sp. PM2-P1-29 CDS91975.1     12
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