Glycoside Hydrolase Family 43 / Subf 12

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (646); Uniprot accession (106); PDB accession (4); 3D entries (3); cryst (1)
All (632) Archaea (4) Bacteria (625) unclassified (3) Structure (3 - 1 cryst) Characterized (12)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 MY04_4629   Flammeovirga sp. MY04 ANQ51964.1     12
 MY04_3590   Flammeovirga sp. MY04 ANQ50938.1     12
 D770_24435   Flammeovirgaceae bacterium 311 AHM63132.1     12
 D770_21840   Flammeovirgaceae bacterium 311 AHM62615.1     12
 FIC_01738   Flavobacteriaceae bacterium 3519-10 ACU08181.1 C6X168   12
 BIW12_10390   Flavobacterium communis PK15 AOZ99808.1     12
 BB050_03115 (Xynb_2)   Flavobacterium johnsoniae GSE09 AOC96205.1     12
 Fjoh_3880   Flavobacterium johnsoniae UW101 ABQ06891.1 A5FD23   12
 FraEuI1c_3438   Frankia inefficax EuI1c ADP81447.1 E3IXZ2   12
 FraEuI1c_5646   Frankia inefficax EuI1c ADP83630.1 E3IUE5   12
 Franean1_0431   Frankia sp. EAN1pec ABW09896.1 A8LGF7   12
 Franean1_4681   Frankia sp. EAN1pec ABW14048.1 A8LEI6   12
 AX769_22360 (fragment)   Frondihabitans sp. PAMC 28766 AMM22871.1     12
 J421_4515   Gemmatirosa kalamazoonesis KBS708 AHG92052.1     12
 β-xylosidase (Xyl;GbtXyl43A) (Xyl43A) 3.2.1.37 Geobacillus thermoleovorans IT-08 ABC75004.1 Q2I2N4 cryst 12
 GRFL_0318   Gramella flava JLT2011 APU67042.1     12
 Halhy_0491   Haliscomenobacter hydrossis DSM 1100 AEE48401.1     12
 Haur_2518   Herpetosiphon aurantiacus DSM 785 ABX05156.1 A9AZL2   12
 Hbal_2600   Hirschia baltica ATCC 49814 ATCC 59814 ACT60275.1 C6XPL0   12
 Hbal_2791   Hirschia baltica ATCC 49814 ATCC 59814 ACT60464.1 C6XQG5   12
 Hsw_3926   Hymenobacter swuensis DY53 AHJ99521.1     12
 Krad_2532   Kineococcus radiotolerans SRS30216 = ATCC BAA-149 ABS04007.1 A6WB18   12
 KSE_73820   Kitasatospora setae KM-6054 BAJ33137.1 E4NJI9   12
 Cphy_0191   Lachnoclostridium phytofermentans ISDg ABX40578.1 A9KRB0   12
 Cphy_0875   Lachnoclostridium phytofermentans ISDg ABX41261.1 A9KLD2   12
 Cphy_2028   Lachnoclostridium phytofermentans ISDg ABX42396.1 A9KIE4   12
 Cphy_3011   Lachnoclostridium phytofermentans ISDg ABX43368.1 A9KQ56   12
 AT746_17625   Lacimicrobium alkaliphilum YelD216 ALS99905.1     12
 LACFE_CDS0594   Lactobacillus fermentum NCC2970 AOR74061.1     12
 BUW47_06755   Lactobacillus fermentum SNUV175 APU46141.1     12
 P906_05215   Lactobacillus gasseri 130918 AJC07987.1     12
 LPE_02541   Lactobacillus pentosus MP-10 CCB83490.1     12
 CEW82_09035   Lactobacillus pentosus SLC13 ASG79985.1     12
 Verru16b_00623 (Xynb_1)   Lacunisphaera limnophila IG16b AOS43574.1     12
 Lbys_2326   Leadbetterella byssophila DSM 17132 ADQ18002.1 E4RWC9   12
 SAMN04515683_2234   Leifsonia sp. 157MF SDK07616.1     12
 SAMN04515690_3273   Leifsonia sp. 197AMF SDH60568.1     12
 SAMN04515684_0515   Leifsonia sp. 466MF SDI78545.1     12
 SAMN04515685_2219   Leifsonia sp. 467MF SEN25279.1     12
 SAMN04515686_2717   Leifsonia sp. 509MF SDN82079.1     12
 SAMN04515691_0747   Leifsonia sp. 98AMF SFL84038.1     12
 BBK82_39610 (fragment)   Lentzea guizhouensis DHS C013 ANZ43402.1     12
 BBK82_39835   Lentzea guizhouensis DHS C013 ANZ41214.1     12
 CNR27_12275   Luteimonas sp. 100111 ATD68869.1     12
 CJ263_04765   Maribacter sp. B1 ASV29579.1     12
 ALGA_3146 (fragment)   Marinifilaceae bacterium SPP2 BAX81446.1     12
 ALGA_1459   Marinifilaceae bacterium SPP2 BAX79838.1     12
 AM586_03270   Massilia sp. WG5 ALK99325.1     12
 MROS_2093   Melioribacter roseus P3M-2 AFN75323.1     12
 MPTP_1899+MPTP_1898   Melissococcus plutonius ATCC 35311 BAK22289.1
BAK22290.1
    12
 MPD5_1693   Melissococcus plutonius DAT561 BAL62875.1     12
 B2G67_15360   Microbacterium foliorum 122 AQY02690.1     12
 SAMN04489810_1175   Microbacterium pygmaeum DSM 23142 SDG74585.1     12
 BMW26_14115   Microbacterium sp. 1.5R APH45965.1     12
 BxlG167   Microbacterium sp. Gsoil167 AGA60131.1     12
 MTES_2033   Microbacterium testaceum StLB037 BAJ74997.1     12
 GA0070611_2301   Micromonospora auratinigra DSM 44815 SBT43384.1     12
 GA0070614_0635   Micromonospora coxensis DSM 45161 SCG39445.1     12
 GA0070618_1379   Micromonospora echinospora DSM 43816 SCE84998.1     12
 GA0070623_1297   Micromonospora rifamycinica DSM 44983 SCG45865.1     12
 SAMN04489834_0880   Microterricola viridarii DSM 21772 SDS10999.1     12
 SAMN04489834_2219   Microterricola viridarii DSM 21772 SDS81875.1     12
 SAMN04489834_0888   Microterricola viridarii DSM 21772 SDS11496.1     12
 AWU67_00630   Microterricola viridarii ERGS5:02 AMB57608.1     12
 MODMU_2190   Modestobacter marinus BC501 CCH87625.1     12
 MODMU_2757   Modestobacter marinus BC501 CCH88186.1     12
 MODMU_2972   Modestobacter marinus BC501 CCH88399.1     12
 ADH68_04405   Muribaculum intestinale YL27 ASB37300.1     12
 Niako_2652   Niastella koreensis GR20-10 AEV98991.1     12
 CGQ36_15890   Nocardiopsis dassonvillei HZNU_N_1 ASU58955.1     12
 A9R04_15695   Nocardiopsis dassonvillei NOCA502F APC36043.1     12
 Ndas_2459   Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 ADH67879.1 D7AWT2   12
 BKM31_23130   Nonomuraea sp. ATCC 55076 AQZ63968.1     12
 BKM31_13215   Nonomuraea sp. ATCC 55076 AQZ62294.1     12
 PP1Y_Mpl1147   Novosphingobium sp. PP1Y CCA90096.1     12
 α-L-arabinofuranosidase (OB2087) 3.2.1.55 Oceanobacillus iheyensis HTE831 BAC14043.1
NP_693008.1
Q8EPL4   12
 Oter_3228   Opitutus terrae PB90-1 ACB76508.1 B1ZN43   12
 Oter_4322   Opitutus terrae PB90-1 ACB77594.1 B1ZPA5   12
 PBOR_25970   Paenibacillus borealis DSM 13188 AIQ60011.1     12
 PBOR_08850   Paenibacillus borealis DSM 13188 AIQ57024.1     12
 PBOR_10870   Paenibacillus borealis DSM 13188 AIQ57372.1     12
 PBOR_08900   Paenibacillus borealis DSM 13188 AIQ57033.1     12
 AR543_14295   Paenibacillus bovis BD3526 ANF97057.1     12
 B9T62_23220   Paenibacillus donghaensis KCTC 13049 ASA23459.1     12
 B9T62_22180   Paenibacillus donghaensis KCTC 13049 ASA23277.1     12
 B9T62_00025   Paenibacillus donghaensis KCTC 13049 ASA19378.1     12
 PGRAT_10610   Paenibacillus graminis DSM 15220 AIQ68022.1     12
 PGRAT_23035   Paenibacillus graminis DSM 15220 AIQ70204.1     12
 BBD41_28290   Paenibacillus ihbetae IHBB 9852 ANY76161.1     12
 BBD41_22630   Paenibacillus ihbetae IHBB 9852 ANY75142.1     12
 BBD41_23075   Paenibacillus ihbetae IHBB 9852 ANY75222.1     12
 BBD41_25340   Paenibacillus ihbetae IHBB 9852 ANY75631.1     12
 B4V02_16595   Paenibacillus kribbensis AM49 ASR48201.1     12
 PM3016_3664   Paenibacillus mucilaginosus 3016 AFC30483.1     12
 PM3016_3826   Paenibacillus mucilaginosus 3016 AFC30637.1     12
 PM3016_5743   Paenibacillus mucilaginosus 3016 AFC32423.1     12
 B2K_19060   Paenibacillus mucilaginosus K02 AFH62789.1     12
 B2K_29235   Paenibacillus mucilaginosus K02 AFH64735.1     12
 KNP414_04221   Paenibacillus mucilaginosus KNP414 AEI42753.1     12
 KNP414_04414   Paenibacillus mucilaginosus KNP414 AEI42946.1     12
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