Glycoside Hydrolase Family 43 / Subf 12

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (681); Uniprot accession (106); PDB accession (4); 3D entries (3); cryst (1)
All (667) Archaea (4) Bacteria (660) unclassified (3) Structure (3 - 1 cryst) Characterized (12)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 SAMN04489716_0878   Actinoplanes derwentensis DSM 43941 SDS48106.1     12
 Amir_3569   Actinosynnema mirum DSM 43827 ACU37459.1 C6WAZ0   12
 CNX65_16735   Actinosynnema pretiosum X47 ATE54721.1     12
 ADH66_01200   Acutalibacter muris KB18 ASB39391.1     12
 ATC03_05105   Agromyces aureus AR33 ANJ26198.1     12
 CDL62_06380   Alkalitalea saponilacus DSM 24412 ASB51083.1     12
 CDL62_00085   Alkalitalea saponilacus DSM 24412 ASB50989.1     12
 CDL62_15875   Alkalitalea saponilacus DSM 24412 ASB50519.1     12
 CDL62_06240   Alkalitalea saponilacus DSM 24412 ASB48761.1     12
 WYH_02217 (XynB)   Altererythrobacter atlanticus 26DY36 AKH43250.1     12
 I633_16785   Alteromonas mediterranea 615 AGP79060.1     12
 amad1_16245   Alteromonas mediterranea DE1 AFV86734.1     12
 AV941_16060   Alteromonas mediterranea U10 AMJ83839.1     12
 I607_15390   Alteromonas mediterranea U4 AGP86863.1     12
 I876_15690   Alteromonas mediterranea U7 AGP90985.1     12
 I634_15635   Alteromonas mediterranea U8 AGP94822.1     12
 I636_15560   Alteromonas mediterranea UM4b AGQ02948.1     12
 I635_16200   Alteromonas mediterranea UM7 AGP98747.1     12
 AV942_15975   Alteromonas mediterranea UM8 AMJ79681.1     12
 AXY_07790   Amphibacillus xylanus NBRC 15112 BAM46911.1     12
 AXY_17570   Amphibacillus xylanus NBRC 15112 BAM47889.1     12
 AXY_23720   Amphibacillus xylanus NBRC 15112 BAM48504.1     12
 B737_6321   Amycolatopsis mediterranei RB AGT86985.1     12
 RAM_32880   Amycolatopsis mediterranei S699 AEK45049.1
AFO79857.1
    12
 AMED_6414   Amycolatopsis mediterranei U32 ADJ48146.1 D8HXE1   12
 AS189_18495   Arthrobacter alpinus ERGS4:06 ALO68121.1     12
 MB46_00245   Arthrobacter sp. A3 ALV44173.1     12
 AHiyo8_30680 (fragment)   Arthrobacter sp. Hiyo8 BAS14765.1     12
 CGK93_10455   Arthrobacter sp. YN ASN20046.1     12
 Astex_0642   Asticcacaulis excentricus CB 48 ADU12329.1 C5SEV4   12
 BC8716_00395   Bacillus clausii DSM 8716 AST94542.1     12
 DB29_00842   Bacillus clausii ENTPro ALA51670.1     12
 ABC1148   Bacillus clausii KSM-K16 BAD63686.1 Q5WIW9   12
 BGLY_0882 (Xynb1)   Bacillus glycinifermentans SCA84705.1     12
 BkAM31D_06545 (Xynb_1)   Bacillus krulwichiae AM31D ARK29545.1     12
 CPQ91_04345   Bacillus licheniformis ATCC 9789 ATI75113.1     12
 BL1202_00938 (XynB) (fragment)   Bacillus licheniformis BL1202 AOP13907.1     12
 BL1202_00939 (fragment)   Bacillus licheniformis BL1202 AOP13908.1     12
 BLi00864 or BL03023 (XynB)   Bacillus licheniformis DSM 13 = ATCC 14580 AAU39798.1
AAU22449.1
Q65MB6   12
 AB684_04310   Bacillus licheniformis HRBL-15TDI7 AMR09441.1     12
 B37_00268 (Xynb_2)   Bacillus licheniformis SCCB 37 ARC72341.1     12
 B14_03495 (Xynb_1)   Bacillus licheniformis SCDB 14 ARC66472.1     12
 B34_03903 (Xynb_2)   Bacillus licheniformis SCDB 34 ARC71261.1     12
 BaDB11_03402 (Xynb_2)   Bacillus licheniformis SCK B11 ARC61986.1     12
 S100141_04732 (XynB)   Bacillus licheniformis SRCM100141 ARW45970.1     12
 glycoside hydrolase (Gh43E)   Bacillus licheniformis SVD1 BAL45537.1     12
 MUY_000908 (XynB)   Bacillus licheniformis WX-02 AKQ72040.1     12
 BaLi_c09680 (Xynb1)   Bacillus paralicheniformis ATCC 9945a AGN35362.1     12
 SC10_B2orf01400   Bacillus paralicheniformis BL-09 AJO17113.1     12
 BLMD_04670   Bacillus paralicheniformis MDJK30 ARA84798.1     12
 S101395_01056 (fragment)   Bacillus sonorensis SRCM101395 ASB87610.1     12
 S101395_01055 (fragment)   Bacillus sonorensis SRCM101395 ASB87609.1     12
 CJO35_04380   Bacillus sp. 1s-1 ASV14435.1     12
 BSZ43_04360   Bacillus sp. H15-1 APJ26088.1     12
 A4V03_00205   Bacteroides caecimuris I48 ANU56186.1     12
 A4V03_00185   Bacteroides caecimuris I48 ANU56182.1     12
 BcellWH2_03520 (Xynb_6)   Bacteroides cellulosilyticus WH2 ALJ60743.1     12
 BcellWH2_02045   Bacteroides cellulosilyticus WH2 ALJ59290.1     12
 BcellWH2_04319 (Xyli_2)   Bacteroides cellulosilyticus WH2 ALJ61536.1     12
 BcellWH2_05295 (Xynb_12)   Bacteroides cellulosilyticus WH2 ALJ62497.1     12
 ABI39_08625   Bacteroides dorei CL03T12C01 AND19475.1     12
 ABI39_00180   Bacteroides dorei CL03T12C01 AND18068.1     12
 EL88_16020   Bacteroides dorei isolate HS1_L1_B_010 AII64564.1     12
 EL88_19380   Bacteroides dorei isolate HS1_L1_B_010 AII65182.1     12
 EL88_19465   Bacteroides dorei isolate HS1_L1_B_010 AII65199.1     12
 GV66_00190   Bacteroides dorei isolate HS1_L3_B_079 AII66225.1     12
 GV66_09010   Bacteroides dorei isolate HS1_L3_B_079 AII67824.1     12
 GV66_09085 (fragment)   Bacteroides dorei isolate HS1_L3_B_079 AII67839.1     12
 IY41_09060 (fragment)   Bacteroides dorei isolate HS2_L_2_B_045b ALA73596.1     12
 IY41_00175   Bacteroides dorei isolate HS2_L_2_B_045b ALA72083.1     12
 IY41_08985   Bacteroides dorei isolate HS2_L_2_B_045b ALA73582.1     12
 Bache_1005   Bacteroides helcogenes P 36-108 ADV43017.1     12
 bifunctional endo-β-1,4-xylanase / α-L-arabinofuranosidase (BiXyn10B/BiAra43A;BACINT_04202) (Xyn10B/Ara43A) 3.2.1.55
3.2.1.8
Bacteroides intestinalis DSM 17393 EDV05059.1     12
 α-L-arabinofuranosidase (BACOVA_03421) 3.2.1.55 Bacteroides ovatus ATCC 8483 EDO10788.1     12
 α-L-arabinofuranosidase (BACOVA_03425) 3.2.1.55 Bacteroides ovatus ATCC 8483 EDO10792.1     12
 Bovatus_03717 (Xynb_7;BACOVA_03421)   Bacteroides ovatus ATCC 8483 ALJ48322.1     12
 α-L-arabinofuranoside (Xynb_4;BoGH43A;BACOVA_02654;Bovatus_03073) 3.2.1.55 Bacteroides ovatus ATCC 8483 ALJ47681.1   5JOW[A,B]
5JOX[A,B]
5JOY[A,B]
12
 Bovatus_03721 (Xynb_8;BACOVA_03425)   Bacteroides ovatus ATCC 8483 ALJ48326.1     12
 α-L-arabinofuranoside (Xynb_5;BoGH43B;BACOVA_02656;Bovatus_03074) 3.2.1.55 Bacteroides ovatus ATCC 8483 ALJ47682.1   5JOZ[A,B] 12
 BACOV975_00835   Bacteroides ovatus V975 SCV07079.1     12
 BACOV975_01506   Bacteroides ovatus V975 SCV07734.1     12
 BACOV975_01502   Bacteroides ovatus V975 SCV07730.1     12
 BACOV975_00836   Bacteroides ovatus V975 SCV07080.1     12
 Bacsa_0891   Bacteroides salanitronis DSM 18170 ADY35483.1     12
 Bacsa_2805   Bacteroides salanitronis DSM 18170 ADY37338.1     12
 BVU_0039   Bacteroides vulgatus ATCC 8482 ABR37769.1 A6KWG3   12
 BvMPK_0268 (fragment)   Bacteroides vulgatus mpk ALK82907.1     12
 BvMPK_3746 (fragment)   Bacteroides vulgatus mpk ALK86306.1     12
 BXY_29200   Bacteroides xylanisolvens XB1A CBK67943.1 D6D0J1   12
 BXY_29240 (fragment)   Bacteroides xylanisolvens XB1A CBK67947.1 D6D0J5   12
 Belba_2171   Belliella baltica DSM 15883 AFL84738.1     12
 BWI17_02655   Betaproteobacteria bacterium GR16-43 APV48679.1     12
 BADO_0428   Bifidobacterium adolescentis 22L AII75853.1     12
 α-L-arabinofuranosidase (AXH-m;AbfA;BAD_0423) 3.2.1.55 Bifidobacterium adolescentis ATCC 15703 BAF39204.1 A1A0H1   12
 BBMN23_0456   Bifidobacterium adolescentis BBMN23 AJE05428.1     12
 BBAG_0329 (fragment)   Bifidobacterium angulatum DSM 20098 = JCM 7096 BAQ95951.1     12
 Bang102_003725   Bifidobacterium angulatum GT102 AMK57659.1     12
 BAA6_0515   Bifidobacterium animalis A6 AJD33628.1     12
 BGL50_02550   Bifidobacterium animalis BL3 ASL77403.1     12
 EN10_02610   Bifidobacterium animalis RH AIA32537.1     12
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