| Activities in Sub Family | Xylan β-1,4-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); |
|---|---|
| Mechanism | Inverting e |
| Clan | GH-F |
| 3D Structure Status | 5-fold β-propeller |
| Catalytic Nucleophile/Base | Asp |
| Catalytic Proton Donor | Glu |
| Note | Many members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713). |
| External resources | CAZypedia; |
| Commercial Enzyme Provider(s) | MEGAZYME; NZYTech; PROZOMIX; |
| Statistics | GenBank accession (13); Uniprot accession (18); PDB accession (1); 3D entries (1); cryst (0) |
| Bacteria | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| α-L-arabinofuranosidase (AmAraf43; EFD62_12070) | 3.2.1.55 | pubmed |
Acetivibrio mesophilus N2K1 | RXE58512.1 | A0A4Q0I6D7 | 10 | ||
| α-L-arabinofuranosidase (BACEGG_01304) | 3.2.1.55 | pubmed |
Bacteroides eggerthii DSM 20697 | ZP_03458529.1 | E5WZQ7 | 6MLY[A,B,C,D] | 10 | |
| double substituted xylan α-1,3-L-arabinofuranosidase (Bovatus_03715; Xynb_6; BACOVA_03417) | 3.2.1.55 | pubmed |
Bacteroides ovatus ATCC 8483 | ALJ48320.1 EDO10784.1 |
A7LZZ1 | 10 | ||
| α-L-arabinofuranosidase (Bt2852;BT_2852) (single substitution specific) | 3.2.1.55 | pubmed |
Bacteroides thetaiotaomicron VPI-5482 | AAO77958.1 NP_811764.1 |
Q8A3V2 | 10 | ||
| double substituted xylan α-1,3-L-specific arabinofuranosidase d3 (AXHd3; AXH-d3; BaAXH-d3; BiAFase-d3; BAD_0301; E-AFAM2) | 3.2.1.55 | pubmed |
Bifidobacterium adolescentis ATCC 15703 | AAO67499.1 BAF39082.1 |
A1A049 Q5JB56 |
10 | ||
| bifunctional β-xylosidase / α-L-arabinofuranosidase (CAX43; Csac_0359) | 3.2.1.37 3.2.1.55 |
pubmed pubmed |
Caldicellulosiruptor saccharolyticus DSM 8903 | ABP66000.1 | A4XGG5 | 10 | ||
| bifunctional α-L-arabinofuranosidase (XynF; Csac_2411) | 3.2.1.55 | pubmed pubmed |
Caldicellulosiruptor saccharolyticus DSM 8903 | ABP67988.1 WP_011917910.1 |
A4XM53 | 10 | ||
| arabinoxylan α-L-arabinofuranosidase (Axh1;Fisuc_1769;FSU_2269) | 3.2.1.55 | pubmed |
Fibrobacter succinogenes subsp. succinogenes S85 | ACX75362.1 ADL24843.1 |
C9RS26 | 10 | ||
| [oligo-ulvan] β-xylosidase (BN863_22160) | 3.2.1.37 | pubmed |
Formosa agariphila KMM 3901 | CDF79928.1 | T2KN85 | 10 | ||
| α-L-arabinofuranosidase (Abf43A) | 3.2.1.55 | pubmed |
Paenibacillus sp. E18 | ACY69973.1 | D6BQP5 | 10 | ||
| α-L-arabinofuranosidase (Ccel_1233) | 3.2.1.55 | pubmed |
Ruminiclostridium cellulolyticum H10 | ACL75589.1 | B8I0L4 | 10 | ||
| α-L-arabinofuranosidase (XuaE; Ccel_1257) | 3.2.1.55 | pubmed |
Ruminiclostridium cellulolyticum H10 | ACL75613.1 | B8I0N8 | 10 | ||
| double substituted arabinoxylan α-1,3-L-specific arabinofuranohydrolase (RjAxh43B) (Axh43B) | 3.2.1.55 | pubmed |
Ruminiclostridium josui JCM 17888 | BAW98157.1 | A0A1Q2U2H0 | 10 | ||
| β-xylosidase (Xyl43B) (Xyl43B) | 3.2.1.37 | pubmed |
Thermoclostridium stercorarium F-9 | BAC87941.1 | Q76EC8 | 10 | ||
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